Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400059403
CDS Infomation

pacid=37458084 polypeptide=PGSC0003DMP400039986 locus=PGSC0003DMG400023080 ID=PGSC0003DMT400059403.v4.03 annot-version=v4.03
Sequence

ATGGAAAGAGCAGATGATGTCTACACAAAAGATGGGACAACTGATATCAATAAAGCACCA
GCTAACAAGAAAAAAACTGGGACATGGAAGGCTTGTTTCTTCATCCTTGGGGAGGAAATC
TCTGAGAGACTAGCGTACTTTGGTACGAGTGCTAATTTGGTTAATTATCTTCATCAAATG
CTTGGCCTAAACAACGCGGCTGCATCAAAAGTTGTAACAAACTTTCAAGGAACTTGCTAT
GTCACGCCTTTGTTCGGAGCATTCTTAGCTGATGCTTACCTTGGGAGATACTGGACAATA
GCAATTTTCTCAATCATTTATATAATGGGAATGACTCTATTGACAATGTCAGCTTCAATA
GTTGGAATAAAGCCATCATGTCATAATGGAATTTGCCACCCAACAGAGCTAGAGAAAACA
ACATTCTACATTGCAATTTACTTGATTGCTTTAGGGACTGGTGGCATCAAACCATGTGTG
TCCTCTTTTGGGGCTGATCAGTTTGATGACAACGATGAGGTCGAAAAGAGAAGGAAAAGC
TCCTTCTTTAACTGGTTTTATCTGTCAATCAATATTGGTTCTCTTATTGCTTCATCAGTC
CTTGTTTGGATACAAACGAGTGTCGGCTGGGGCTGGGGTTTCGGAATTCCAGCTGTTGCA
ATGGCTATTGCTCTTATGTTTTTCTTTGCAGGCACTCGTTTTTATAGGCTCCAGACGCCA
GGAGGTAGTCCATTGATTCGGATGTTGCAAGTATTGGTAGCTTCTATGAGAAAATGGGAT
GTTAAACCTCCTGCTGATAAATCTCTTCTTTATGAGACTGCTAATGAGGAATCAAGCATC
CTGGGAAGCCGCAAGCTCGCTCATACGGATAAATTCAGCTTCTTGGACAAGTCTGCTGTG
GAAACAACACACGATAAAGTAAATGGATCGGTGAATCCCTGGAGGCTCTGTACCGTGACA
CAAGTTGAGGAAATCAAGTCTATTATTCGTCTACTCCCAGTGTGGGCATGCTGCATTATG
TTCACGACTGCATACAGTCAGATGAACACAACATTTGTGCTCCAAGGGAACACAATGGAC
CGCCACATGGGCGGTCATTTCAAAATACCATCAGCATCTTTGACAGTATTCGAAACAATC
AGTGTGATACTATGGGTGCTGATATATGACCAACTCATCATCCCCTTTGCTAGAAAGTAC
ACAGGCCACGCCCGGGGATTCACTCAGCTTCAGAGGATAGGTATAGGCCTTGTAATATCT
ATATTGTCCATGGTAGCTGCTGGTGTTGTGGAAGTAGTACGCCTCGACTACATCAAACAG
AAGGGGTATTATGATGTCAAGACTATTCCTATGTCTATCTTCTGGCAAGTTCCTCAGTAT
TTTTTCATTGGATGCGCGGGGGTATTCACGTTGATAGGTCAAGTGGAATTCTTCTATGAT
CAAGCTCCCGACGCGATGAGAAGCTTATGTTCAGCCCTATTGTTGATGGCAGCTGCATTA
GGTAGCTATTTGAGTAGTTTCCTAGTTACAATAGTGACAAGGAACAAGAAGTTTGGATGG
ATAACAGAAAATTTGAACAAAGGGCATTTAGATTACTTCTTTTGGCTATTGGTTATACTT
AGCATTATCAACTTCATGGTGTTTCTATTGGTTTCAAGATTGTATGTCTACAAGAAGGTT
ATTCATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400039986
PEP Infomation

pacid=37458084 transcript=PGSC0003DMT400059403 locus=PGSC0003DMG400023080 ID=PGSC0003DMT400059403.v4.03 annot-version=v4.03
Sequence

MERADDVYTKDGTTDINKAPANKKKTGTWKACFFILGEEISERLAYFGTSANLVNYLHQM
LGLNNAAASKVVTNFQGTCYVTPLFGAFLADAYLGRYWTIAIFSIIYIMGMTLLTMSASI
VGIKPSCHNGICHPTELEKTTFYIAIYLIALGTGGIKPCVSSFGADQFDDNDEVEKRRKS
SFFNWFYLSINIGSLIASSVLVWIQTSVGWGWGFGIPAVAMAIALMFFFAGTRFYRLQTP
GGSPLIRMLQVLVASMRKWDVKPPADKSLLYETANEESSILGSRKLAHTDKFSFLDKSAV
ETTHDKVNGSVNPWRLCTVTQVEEIKSIIRLLPVWACCIMFTTAYSQMNTTFVLQGNTMD
RHMGGHFKIPSASLTVFETISVILWVLIYDQLIIPFARKYTGHARGFTQLQRIGIGLVIS
ILSMVAAGVVEVVRLDYIKQKGYYDVKTIPMSIFWQVPQYFFIGCAGVFTLIGQVEFFYD
QAPDAMRSLCSALLLMAAALGSYLSSFLVTIVTRNKKFGWITENLNKGHLDYFFWLLVIL
SIINFMVFLLVSRLYVYKKVIH*

Transcript Sequence

Transcript ID

PGSC0003DMT400059403
Transcript Infomation

pacid=37458084 locus=PGSC0003DMG400023080 ID=PGSC0003DMT400059403.v4.03 annot-version=v4.03
Sequence

ATGGAAAGAGCAGATGATGTCTACACAAAAGATGGGACAACTGATATCAATAAAGCACCA
GCTAACAAGAAAAAAACTGGGACATGGAAGGCTTGTTTCTTCATCCTTGGGGAGGAAATC
TCTGAGAGACTAGCGTACTTTGGTACGAGTGCTAATTTGGTTAATTATCTTCATCAAATG
CTTGGCCTAAACAACGCGGCTGCATCAAAAGTTGTAACAAACTTTCAAGGAACTTGCTAT
GTCACGCCTTTGTTCGGAGCATTCTTAGCTGATGCTTACCTTGGGAGATACTGGACAATA
GCAATTTTCTCAATCATTTATATAATGGGAATGACTCTATTGACAATGTCAGCTTCAATA
GTTGGAATAAAGCCATCATGTCATAATGGAATTTGCCACCCAACAGAGCTAGAGAAAACA
ACATTCTACATTGCAATTTACTTGATTGCTTTAGGGACTGGTGGCATCAAACCATGTGTG
TCCTCTTTTGGGGCTGATCAGTTTGATGACAACGATGAGGTCGAAAAGAGAAGGAAAAGC
TCCTTCTTTAACTGGTTTTATCTGTCAATCAATATTGGTTCTCTTATTGCTTCATCAGTC
CTTGTTTGGATACAAACGAGTGTCGGCTGGGGCTGGGGTTTCGGAATTCCAGCTGTTGCA
ATGGCTATTGCTCTTATGTTTTTCTTTGCAGGCACTCGTTTTTATAGGCTCCAGACGCCA
GGAGGTAGTCCATTGATTCGGATGTTGCAAGTATTGGTAGCTTCTATGAGAAAATGGGAT
GTTAAACCTCCTGCTGATAAATCTCTTCTTTATGAGACTGCTAATGAGGAATCAAGCATC
CTGGGAAGCCGCAAGCTCGCTCATACGGATAAATTCAGCTTCTTGGACAAGTCTGCTGTG
GAAACAACACACGATAAAGTAAATGGATCGGTGAATCCCTGGAGGCTCTGTACCGTGACA
CAAGTTGAGGAAATCAAGTCTATTATTCGTCTACTCCCAGTGTGGGCATGCTGCATTATG
TTCACGACTGCATACAGTCAGATGAACACAACATTTGTGCTCCAAGGGAACACAATGGAC
CGCCACATGGGCGGTCATTTCAAAATACCATCAGCATCTTTGACAGTATTCGAAACAATC
AGTGTGATACTATGGGTGCTGATATATGACCAACTCATCATCCCCTTTGCTAGAAAGTAC
ACAGGCCACGCCCGGGGATTCACTCAGCTTCAGAGGATAGGTATAGGCCTTGTAATATCT
ATATTGTCCATGGTAGCTGCTGGTGTTGTGGAAGTAGTACGCCTCGACTACATCAAACAG
AAGGGGTATTATGATGTCAAGACTATTCCTATGTCTATCTTCTGGCAAGTTCCTCAGTAT
TTTTTCATTGGATGCGCGGGGGTATTCACGTTGATAGGTCAAGTGGAATTCTTCTATGAT
CAAGCTCCCGACGCGATGAGAAGCTTATGTTCAGCCCTATTGTTGATGGCAGCTGCATTA
GGTAGCTATTTGAGTAGTTTCCTAGTTACAATAGTGACAAGGAACAAGAAGTTTGGATGG
ATAACAGAAAATTTGAACAAAGGGCATTTAGATTACTTCTTTTGGCTATTGGTTATACTT
AGCATTATCAACTTCATGGTGTTTCTATTGGTTTCAAGATTGTATGTCTACAAGAAGGTT
ATTCATTGA