Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400059264
CDS Infomation

pacid=37473640 polypeptide=PGSC0003DMP400039906 locus=PGSC0003DMG400023024 ID=PGSC0003DMT400059264.v4.03 annot-version=v4.03
Sequence

ATGACATCGACGGCCGATGAATTCTCTAAGCTTAACATTAGTGCCGATTGGGCTTCTACT
GCTCCCAATTTACACAAAAACCTATCTCTTCTCTCCTCTCAACAGGTAGAATTGGCGAAA
GTGTTGATAGAGATGGGGCAAAGTCACTTGTTTCAGCATTGGGCGGAACCTGGAGTTGAT
GATGATGAGAAGCGAGCCTTCTTTGATCAGATTGCTAAACTTAATTCAAGTTATCCTGGG
GGGTTGGCAGCATACATTAACACTGCTAGGAAGCTTTTAGCTGATTCAAAGGCTGGAAAA
AACCCGTATGATGGTTTTACACCTTCGGTTCCATCTGGAGAGGTTCTGAATTATGGTGAC
GATAATTTTGTTCAATTTGAGGAGGCTGGCATCAAAGACGCACGGAAGGCTGCATTTGTT
CTTGTTGCTGGAGGCCTCGGAGAGCGTCTTGGGTACAATGGAATAAAGGTGGCCCTTCCT
AGAGAAACAACTACAGGGACATGCTTCTTACAACATTATATTGAATCTATTCTTGCTTTA
CAAGAAGCCAGTTGCAGCCTTGCTGGAGGTGACTGCCGAGTGGATATTCCTCTGGCTATT
ATGACGTCAGATGACACACATTTGCGTACTCTGGAGCTCTTAGAGAAAAACTCTTATTTT
GGAATGAAACCCACACAAGTGAAACTGCTCAAGCAGGAAAAAGTTGCTTGTTTAGATGAT
AATGAAGCACACCTTGCTCTGGATCCCCGTAATAAATATAGAATTCAGACAAAACCTCAT
GGCCATGGTGACGTCCATTCACTTCTTTACTCAAGTGGCCTTCTTAAAGTGTGGCATGAT
GCAGGCTTAAGATGGGTCCTTTTTTTCCAGGACACCAACGGTCTACTTTTCAAGGCAATT
CCAGCAGCACTTGGCGTCAGTACCTCAAAACAATACCATGTCAATTCTCTTGCTGTTCCT
CGGAAAGCAAAAGAAGCCATTGGTGGCATTACCAAGCTTACTCATAAAGATGGGCGAACG
ATGGTGATTAATGTGGAATATAACCAGCTTGATCCATTGCTTAGAGCTTCTGGATATCCT
GATGGCGATGTCAATTCTGAAACAGGCTATTCACCTTTTCCTGGAAATATAAATCAATTA
ATCTTTGAAATTGGTCCATATCTTGAAGAGCTCACAAAAACAGGAGGTGCGATCTCGGAG
TTTGTTAACCCTAAGTACAAAGATGCTACCAAAACCGCTTTTAAGTCATCAACTCGTCTT
GAATGCATGATGCAAGATTATCCTAAAACACTACCTCCTACAGCTAGAGTTGGATTCACT
GTGATGGATGCTTGGCTTGCTTATGCACCTGTGAAAAACAACCCAGAAGATGCTGCCAAG
GTGCCAAAAGGAAATCCCTACCACAGTGCCACTTCGGGAGAAATGGCCATATATCGCTCT
CACAGCCTCATTCTAAGAAAGGCTGGTGTTAAGATAGATGATCCGGTTATCCAAGTATTT
AACGGGCAGGAGGTAGAGGTATGGTCTCGAGTTGTATGGAAGCCGAAATGGGCGCTTACT
TTCTCAGAAGTAAAACGTAAAGTAAGTGGAAACTGCTCCATTTCACAAAGGTCTACAATG
GCGATCAAGGGGAGTAATATTGCCCTTGAGGATCTTTCCCTGGATGGAGCTCTCATTGTA
GAGGCTGTTAATGGAGCCGAGGTCAAAGTGGGAGGTCCCGTGCAGAACAAGGGTTGGACA
ATTGAAAATGTCGACTATAAGGATACTTCAATACCAGAAGAAATAAGAATCAGAGGTTTC
AGATTCAACAAGGTTGAGCAGTTGGAGTTGGAGAAAACATATACCGAGCCCGGTAAATAT
TCTTTGAAGCCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400039906
PEP Infomation

pacid=37473640 transcript=PGSC0003DMT400059264 locus=PGSC0003DMG400023024 ID=PGSC0003DMT400059264.v4.03 annot-version=v4.03
Sequence

MTSTADEFSKLNISADWASTAPNLHKNLSLLSSQQVELAKVLIEMGQSHLFQHWAEPGVD
DDEKRAFFDQIAKLNSSYPGGLAAYINTARKLLADSKAGKNPYDGFTPSVPSGEVLNYGD
DNFVQFEEAGIKDARKAAFVLVAGGLGERLGYNGIKVALPRETTTGTCFLQHYIESILAL
QEASCSLAGGDCRVDIPLAIMTSDDTHLRTLELLEKNSYFGMKPTQVKLLKQEKVACLDD
NEAHLALDPRNKYRIQTKPHGHGDVHSLLYSSGLLKVWHDAGLRWVLFFQDTNGLLFKAI
PAALGVSTSKQYHVNSLAVPRKAKEAIGGITKLTHKDGRTMVINVEYNQLDPLLRASGYP
DGDVNSETGYSPFPGNINQLIFEIGPYLEELTKTGGAISEFVNPKYKDATKTAFKSSTRL
ECMMQDYPKTLPPTARVGFTVMDAWLAYAPVKNNPEDAAKVPKGNPYHSATSGEMAIYRS
HSLILRKAGVKIDDPVIQVFNGQEVEVWSRVVWKPKWALTFSEVKRKVSGNCSISQRSTM
AIKGSNIALEDLSLDGALIVEAVNGAEVKVGGPVQNKGWTIENVDYKDTSIPEEIRIRGF
RFNKVEQLELEKTYTEPGKYSLKP*

Transcript Sequence

Transcript ID

PGSC0003DMT400059264
Transcript Infomation

pacid=37473640 locus=PGSC0003DMG400023024 ID=PGSC0003DMT400059264.v4.03 annot-version=v4.03
Sequence

ATGACATCGACGGCCGATGAATTCTCTAAGCTTAACATTAGTGCCGATTGGGCTTCTACT
GCTCCCAATTTACACAAAAACCTATCTCTTCTCTCCTCTCAACAGGTAGAATTGGCGAAA
GTGTTGATAGAGATGGGGCAAAGTCACTTGTTTCAGCATTGGGCGGAACCTGGAGTTGAT
GATGATGAGAAGCGAGCCTTCTTTGATCAGATTGCTAAACTTAATTCAAGTTATCCTGGG
GGGTTGGCAGCATACATTAACACTGCTAGGAAGCTTTTAGCTGATTCAAAGGCTGGAAAA
AACCCGTATGATGGTTTTACACCTTCGGTTCCATCTGGAGAGGTTCTGAATTATGGTGAC
GATAATTTTGTTCAATTTGAGGAGGCTGGCATCAAAGACGCACGGAAGGCTGCATTTGTT
CTTGTTGCTGGAGGCCTCGGAGAGCGTCTTGGGTACAATGGAATAAAGGTGGCCCTTCCT
AGAGAAACAACTACAGGGACATGCTTCTTACAACATTATATTGAATCTATTCTTGCTTTA
CAAGAAGCCAGTTGCAGCCTTGCTGGAGGTGACTGCCGAGTGGATATTCCTCTGGCTATT
ATGACGTCAGATGACACACATTTGCGTACTCTGGAGCTCTTAGAGAAAAACTCTTATTTT
GGAATGAAACCCACACAAGTGAAACTGCTCAAGCAGGAAAAAGTTGCTTGTTTAGATGAT
AATGAAGCACACCTTGCTCTGGATCCCCGTAATAAATATAGAATTCAGACAAAACCTCAT
GGCCATGGTGACGTCCATTCACTTCTTTACTCAAGTGGCCTTCTTAAAGTGTGGCATGAT
GCAGGCTTAAGATGGGTCCTTTTTTTCCAGGACACCAACGGTCTACTTTTCAAGGCAATT
CCAGCAGCACTTGGCGTCAGTACCTCAAAACAATACCATGTCAATTCTCTTGCTGTTCCT
CGGAAAGCAAAAGAAGCCATTGGTGGCATTACCAAGCTTACTCATAAAGATGGGCGAACG
ATGGTGATTAATGTGGAATATAACCAGCTTGATCCATTGCTTAGAGCTTCTGGATATCCT
GATGGCGATGTCAATTCTGAAACAGGCTATTCACCTTTTCCTGGAAATATAAATCAATTA
ATCTTTGAAATTGGTCCATATCTTGAAGAGCTCACAAAAACAGGAGGTGCGATCTCGGAG
TTTGTTAACCCTAAGTACAAAGATGCTACCAAAACCGCTTTTAAGTCATCAACTCGTCTT
GAATGCATGATGCAAGATTATCCTAAAACACTACCTCCTACAGCTAGAGTTGGATTCACT
GTGATGGATGCTTGGCTTGCTTATGCACCTGTGAAAAACAACCCAGAAGATGCTGCCAAG
GTGCCAAAAGGAAATCCCTACCACAGTGCCACTTCGGGAGAAATGGCCATATATCGCTCT
CACAGCCTCATTCTAAGAAAGGCTGGTGTTAAGATAGATGATCCGGTTATCCAAGTATTT
AACGGGCAGGAGGTAGAGGTATGGTCTCGAGTTGTATGGAAGCCGAAATGGGCGCTTACT
TTCTCAGAAGTAAAACGTAAAGTAAGTGGAAACTGCTCCATTTCACAAAGGTCTACAATG
GCGATCAAGGGGAGTAATATTGCCCTTGAGGATCTTTCCCTGGATGGAGCTCTCATTGTA
GAGGCTGTTAATGGAGCCGAGGTCAAAGTGGGAGGTCCCGTGCAGAACAAGGGTTGGACA
ATTGAAAATGTCGACTATAAGGATACTTCAATACCAGAAGAAATAAGAATCAGAGGTTTC
AGATTCAACAAGGTTGAGCAGTTGGAGTTGGAGAAAACATATACCGAGCCCGGTAAATAT
TCTTTGAAGCCATAA