Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400059197
CDS Infomation

pacid=37433016 polypeptide=PGSC0003DMP400039866 locus=PGSC0003DMG400022993 ID=PGSC0003DMT400059197.v4.03 annot-version=v4.03
Sequence

ATGGCAGAAGAAGAAGATGTCTACACCAAGGATGGAACTGTCGATTATCGGAATAAGCCT
GCAAATAAAAAGAAAACAGGAACTTGGAAGGCTTGCCCTTATATACTTGGGAATGAATGC
TGTGAAAGATTGGCATATTATGGAATGAGCACCAATCTTGTGTATTATTTCAAGACTCAA
CTCAGTCAGGAAACTGCAACGGCGTCTAAAAATCAATCGAATTGGGCAGGGACCTGTTAT
GTTATGCCTTTGCTTGGAGCATTTCTCGCCGACTCTTATCTTGGAAGATACTGGACTATT
GCCATATTCTCAATCATCTATGTTTGTGGGATGACACTATTGACAGTATCAGCATCAGTG
CCCGGACTTAGGCCGATTTGTTATGAAAAGAATAAATGTCACTCAACCGATAGTCAAACA
GCAGTATTCTTCGTTGCACTCTACTTAGTAGCACTGGGAACCGGAGGAATCAAGCCGTGT
GTCTCATCCTATGGTGCAGACCAGTTTGATGATGCTGATCCTATCGAAAGGAACTACAAA
AATTCCTTCTTTAATTGGTTCTACTTCTCCATCAACATTGGGGCTCTCGTTGCTTCTTCG
TTGATAGTCTGGATACAACAGGATATTAGCTGGGGATGGGGATTTGGTGTTCCTGCTGCG
GCTATGGCCTTTGCTGTTGTATCGTTCTTTTCAGGATCTAGGCTCTATAGATACCAAAAG
CCTGGAGGAAGCCCTTTGACGCGTATATGCCAGGTTGTAGTGGCTTCTCTTAGAAAATGT
CATGTTACATTGCCTGCTGAAAAATCTCTGTTATATGAGACTGCAGAAGCTGAATCCGCC
ATCAAAGGGAGTCGCAAACTTGCTCATACAAACGACCTGAGGTTCTTCGATAGAGCTGCT
GTGAAAACAGGGTTGGATGAGAACAGAGGTTCAATAAACAATTGGAAACTTTGCACAGTG
ACACAAGTTGAGGAGTTCAAGTCTGTTGTCAAGTTGCTACCTATTTGGGCTACTGGGATT
ATCTTCAGCACAGCGTATAGCCAAATGAGCAATTATTTTGTGGTGCAAGCCATGTCTATG
GATACACATTTAGGCAAATTAAAAATCCCCGAGGCTTCACTATCTGTTTTTGACACCATC
GCGGTTATTCTATGGGTTCCTGTCTATGATAGAGTGCTTGTACCATTCGTTCGAAAGTTC
ACAGGTCACAAGAATGGATTGACTCAACTCCAACGAATGGGAACGGGGCTTGTTATATCT
GTCTTTGCTATGGTATCTGCTGCACTCGTGGAGGTAGTTAGGCTCGGGATAGTAAAAAGG
CGCAACCTCTATGACTCCAAGGACATCCCAATGTCAGTATTTTGGCAAATTCCTCAGTAC
ATGATAATTGGTTGTGCTGAAGTTTTCACATTTATCGGTCAGTTGGAGTTCTTCTATGAT
CAAGCTCCTGATTCAATGCGGAGTTTGTGTGCTGCTCTCTCTTTGACAACCACCGCGCTT
GGGAGTTATGTGAGCTCGTTGTTAGTAACCATTGTCACAGATATTAGCACGAGGAATGGG
AAGATGGGATGGCTATCAGACAATCCAAATTACGGAAAGCTTCATTATTTCTTCTTCCTA
CTGTCCGTTTTAAGCGTGCTAAACTTCTTCATTTTTCTCATCGTTGCAAAGAGATACAAG
TATAAGAAGGCAATCAACAAGGACGACCCTGTTCCAATGGTGGCTAATGGTGATGACAAC
AAGCTCGATTTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400039866
PEP Infomation

pacid=37433016 transcript=PGSC0003DMT400059197 locus=PGSC0003DMG400022993 ID=PGSC0003DMT400059197.v4.03 annot-version=v4.03
Sequence

MAEEEDVYTKDGTVDYRNKPANKKKTGTWKACPYILGNECCERLAYYGMSTNLVYYFKTQ
LSQETATASKNQSNWAGTCYVMPLLGAFLADSYLGRYWTIAIFSIIYVCGMTLLTVSASV
PGLRPICYEKNKCHSTDSQTAVFFVALYLVALGTGGIKPCVSSYGADQFDDADPIERNYK
NSFFNWFYFSINIGALVASSLIVWIQQDISWGWGFGVPAAAMAFAVVSFFSGSRLYRYQK
PGGSPLTRICQVVVASLRKCHVTLPAEKSLLYETAEAESAIKGSRKLAHTNDLRFFDRAA
VKTGLDENRGSINNWKLCTVTQVEEFKSVVKLLPIWATGIIFSTAYSQMSNYFVVQAMSM
DTHLGKLKIPEASLSVFDTIAVILWVPVYDRVLVPFVRKFTGHKNGLTQLQRMGTGLVIS
VFAMVSAALVEVVRLGIVKRRNLYDSKDIPMSVFWQIPQYMIIGCAEVFTFIGQLEFFYD
QAPDSMRSLCAALSLTTTALGSYVSSLLVTIVTDISTRNGKMGWLSDNPNYGKLHYFFFL
LSVLSVLNFFIFLIVAKRYKYKKAINKDDPVPMVANGDDNKLDL*

Transcript Sequence

Transcript ID

PGSC0003DMT400059197
Transcript Infomation

pacid=37433016 locus=PGSC0003DMG400022993 ID=PGSC0003DMT400059197.v4.03 annot-version=v4.03
Sequence

ATGGCAGAAGAAGAAGATGTCTACACCAAGGATGGAACTGTCGATTATCGGAATAAGCCT
GCAAATAAAAAGAAAACAGGAACTTGGAAGGCTTGCCCTTATATACTTGGGAATGAATGC
TGTGAAAGATTGGCATATTATGGAATGAGCACCAATCTTGTGTATTATTTCAAGACTCAA
CTCAGTCAGGAAACTGCAACGGCGTCTAAAAATCAATCGAATTGGGCAGGGACCTGTTAT
GTTATGCCTTTGCTTGGAGCATTTCTCGCCGACTCTTATCTTGGAAGATACTGGACTATT
GCCATATTCTCAATCATCTATGTTTGTGGGATGACACTATTGACAGTATCAGCATCAGTG
CCCGGACTTAGGCCGATTTGTTATGAAAAGAATAAATGTCACTCAACCGATAGTCAAACA
GCAGTATTCTTCGTTGCACTCTACTTAGTAGCACTGGGAACCGGAGGAATCAAGCCGTGT
GTCTCATCCTATGGTGCAGACCAGTTTGATGATGCTGATCCTATCGAAAGGAACTACAAA
AATTCCTTCTTTAATTGGTTCTACTTCTCCATCAACATTGGGGCTCTCGTTGCTTCTTCG
TTGATAGTCTGGATACAACAGGATATTAGCTGGGGATGGGGATTTGGTGTTCCTGCTGCG
GCTATGGCCTTTGCTGTTGTATCGTTCTTTTCAGGATCTAGGCTCTATAGATACCAAAAG
CCTGGAGGAAGCCCTTTGACGCGTATATGCCAGGTTGTAGTGGCTTCTCTTAGAAAATGT
CATGTTACATTGCCTGCTGAAAAATCTCTGTTATATGAGACTGCAGAAGCTGAATCCGCC
ATCAAAGGGAGTCGCAAACTTGCTCATACAAACGACCTGAGGTTCTTCGATAGAGCTGCT
GTGAAAACAGGGTTGGATGAGAACAGAGGTTCAATAAACAATTGGAAACTTTGCACAGTG
ACACAAGTTGAGGAGTTCAAGTCTGTTGTCAAGTTGCTACCTATTTGGGCTACTGGGATT
ATCTTCAGCACAGCGTATAGCCAAATGAGCAATTATTTTGTGGTGCAAGCCATGTCTATG
GATACACATTTAGGCAAATTAAAAATCCCCGAGGCTTCACTATCTGTTTTTGACACCATC
GCGGTTATTCTATGGGTTCCTGTCTATGATAGAGTGCTTGTACCATTCGTTCGAAAGTTC
ACAGGTCACAAGAATGGATTGACTCAACTCCAACGAATGGGAACGGGGCTTGTTATATCT
GTCTTTGCTATGGTATCTGCTGCACTCGTGGAGGTAGTTAGGCTCGGGATAGTAAAAAGG
CGCAACCTCTATGACTCCAAGGACATCCCAATGTCAGTATTTTGGCAAATTCCTCAGTAC
ATGATAATTGGTTGTGCTGAAGTTTTCACATTTATCGGTCAGTTGGAGTTCTTCTATGAT
CAAGCTCCTGATTCAATGCGGAGTTTGTGTGCTGCTCTCTCTTTGACAACCACCGCGCTT
GGGAGTTATGTGAGCTCGTTGTTAGTAACCATTGTCACAGATATTAGCACGAGGAATGGG
AAGATGGGATGGCTATCAGACAATCCAAATTACGGAAAGCTTCATTATTTCTTCTTCCTA
CTGTCCGTTTTAAGCGTGCTAAACTTCTTCATTTTTCTCATCGTTGCAAAGAGATACAAG
TATAAGAAGGCAATCAACAAGGACGACCCTGTTCCAATGGTGGCTAATGGTGATGACAAC
AAGCTCGATTTGTGA