Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400059179
CDS Infomation

pacid=37432645 polypeptide=PGSC0003DMP400039854 locus=PGSC0003DMG400022987 ID=PGSC0003DMT400059179.v4.03 annot-version=v4.03
Sequence

ATGGGGAAGAAAAAAACAGATGAGGCTGGTGTAAGTGTGAAGGCTAAGGGAAGCAGCAAA
GATTCCAAGGAAGGGAAAAAGGAGAAGCTTTCTGTCTCTGCCATGCTTGCCAGCATGGAC
CAGAAACCTGAGAAGCCCAACAAAGGTTCTTCAGCCACTGGTGCTAGTAAGGCCAAGCCT
AAAGCCGCTCCAAAAGCATCAGCTTACACTGATGGTATTGATCTTCCTCCCTCTGATGAC
GAGGAAGAGGAGTATCTTCCTGGCCCCGAAGAAGTGGAGGAACTGATCGATGGTAATAGA
AGGCATAGAAGGAATGAAGCAGGTCCAATTGATACCTCCGTAAGTTATAAAGAGCTAAAG
AAACGAGAAAAGAAGGATATGCTTGCTGTTCAGGCAGCTGAGGTGGCAAAAAAGGAGGCC
CTTAGGGACGATCATGATGCTTTTACTGTTGTTATTGGTAGCAGGGCATCTGTTCTTGAA
GGTCAAGAGGATGCTGATGCAAATGTTAAGGATATAACTATAGAGAATTTCTCCGTAGCA
GCTCGTGGAAAAGACCTTTTAAAGAACACATCAGTTAAGATATCTCATGGGAAGAGATAT
GGTTTAGTTGGTCCCAATGGAATGGGCAAGTCCACCCTACTAAAACTCCTTGCTTGGAGG
AAGATTCCTGTACCAAAAAACATTGACGTACTTTTGGTTGAACAAGAGATAGTTGGTGAT
GATAGGACTGCACTTGAAGCTGTTGTTTCAGCTAACGAGGAGCTCATCAAGCTCCGAGAA
GAGGCTGCATCTTTACAGAATGCTGCTGCATCTGTTGGTGAGAATGAAGATGATACTGAT
GGGGACAACATTGTAGAAAAACTTTCTGAACTGTACGAAAGGTTGCAGCTGATGGGATCA
GATGCTGCTGAGGCCCAAGCATCAAAAATTCTTGCTGGGCTGGGTTTCACCAAGGAAATG
CAGGGGCGTGCTACCCGATCTTTTAGTGGTGGTTGGAGGATGAGAATTTCTCTAGCACGG
GCTCTTTTTGTTCAGCCTACTCTATTGCTGTTGGATGAACCTACTAATCATCTTGACCTT
CGGGCTGTTCTATGGTTAGAGGAGTACTTGTGCAGATGGAAGAAAACTCTGGTCGTTGTT
TCACATGATCGAGACTTTCTGAACACTGTTTGCAGTGAGATTATTCATCTCCATGACATG
AAACTACACTTCTATCGTGGTAACTTTGATGATTTTGAAAGTGGATATGAACAGCGTCGC
AAAGAGATGAACAAGAAGTTTGAGATTTATGATAAGCAGTTAAAAGCTGCCAAGAGATCT
GGAAGTCGAGCACAACAGGAGAAGGTAAAAGACCGAGCCAAATTTGTAGCTTCCAAAGAA
TCAAAGAAAAAAGGAAAGGATAGGGTTGATGAAGATGAAACTCCACCTGAAGCACCTCAG
AAGTGGAGGGACTACAGCGTGGAGTTCCACTTCCCTGAGCCTACTGAACTGACACCTCCA
CTTCTTCAGCTAATTGAGGTCAGCTTCAGTTATCCTAATCGACCAGACTTCAGGCTCTCT
GATGTTGATGTTGGAATTGATATGGGGACTCGAGTTGCTATCGTTGGGCCCAATGGAGCA
GGCAAATCGACCTTGCTTAACCTCTTGGCAGGTGATTTAGTTCCTACAGAAGGTGAAGCC
CGCAGGAGTCAAAAGTTGAGGATTGGACGGTACTCACAGCATTTTGTTGATCTTCTCACA
ATGGATGAAACACCTGTCCAGTACCTGCTTCGTCTTCACCCAGATCAAGAGGGACCTAGT
AAGCAAGAAGCTGTTCGTGCAAAGCTAGGAAAATTTGGACTTCCCAGTCATAACCATCTT
ACCCCCATTTTAAAGTTGTCTGGAGGACAAAAAGCTAGAGTTGTATTTACATCTATTTCC
ATGTCGAAGCCTCACATCTTGCTGTTAGATGAGCCAACAAACCATTTGGATATGCAGAGT
ATCGATGCTTTGGCAGATGCGCTTGATGAGTTCACTGGTGGAGTTGTGTTAGTCAGTCAC
GACTCGAGGCTCATATCAAGGGTTTGTGATGATGAAGAAAGAAGTGAAATTTGGATAGTT
GAGAATGGGACCGTTGAAAAGTTCCCAGATACATTTGATGAGTACAAGGCAGAACTTGTA
AGGGAAATCAGGGAAGAAGTTGATGATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400039854
PEP Infomation

pacid=37432645 transcript=PGSC0003DMT400059179 locus=PGSC0003DMG400022987 ID=PGSC0003DMT400059179.v4.03 annot-version=v4.03
Sequence

MGKKKTDEAGVSVKAKGSSKDSKEGKKEKLSVSAMLASMDQKPEKPNKGSSATGASKAKP
KAAPKASAYTDGIDLPPSDDEEEEYLPGPEEVEELIDGNRRHRRNEAGPIDTSVSYKELK
KREKKDMLAVQAAEVAKKEALRDDHDAFTVVIGSRASVLEGQEDADANVKDITIENFSVA
ARGKDLLKNTSVKISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEIVGD
DRTALEAVVSANEELIKLREEAASLQNAAASVGENEDDTDGDNIVEKLSELYERLQLMGS
DAAEAQASKILAGLGFTKEMQGRATRSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDL
RAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCSEIIHLHDMKLHFYRGNFDDFESGYEQRR
KEMNKKFEIYDKQLKAAKRSGSRAQQEKVKDRAKFVASKESKKKGKDRVDEDETPPEAPQ
KWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNRPDFRLSDVDVGIDMGTRVAIVGPNGA
GKSTLLNLLAGDLVPTEGEARRSQKLRIGRYSQHFVDLLTMDETPVQYLLRLHPDQEGPS
KQEAVRAKLGKFGLPSHNHLTPILKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQS
IDALADALDEFTGGVVLVSHDSRLISRVCDDEERSEIWIVENGTVEKFPDTFDEYKAELV
REIREEVDD*

Transcript Sequence

Transcript ID

PGSC0003DMT400059179
Transcript Infomation

pacid=37432645 locus=PGSC0003DMG400022987 ID=PGSC0003DMT400059179.v4.03 annot-version=v4.03
Sequence

ATGGGGAAGAAAAAAACAGATGAGGCTGGTGTAAGTGTGAAGGCTAAGGGAAGCAGCAAA
GATTCCAAGGAAGGGAAAAAGGAGAAGCTTTCTGTCTCTGCCATGCTTGCCAGCATGGAC
CAGAAACCTGAGAAGCCCAACAAAGGTTCTTCAGCCACTGGTGCTAGTAAGGCCAAGCCT
AAAGCCGCTCCAAAAGCATCAGCTTACACTGATGGTATTGATCTTCCTCCCTCTGATGAC
GAGGAAGAGGAGTATCTTCCTGGCCCCGAAGAAGTGGAGGAACTGATCGATGGTAATAGA
AGGCATAGAAGGAATGAAGCAGGTCCAATTGATACCTCCGTAAGTTATAAAGAGCTAAAG
AAACGAGAAAAGAAGGATATGCTTGCTGTTCAGGCAGCTGAGGTGGCAAAAAAGGAGGCC
CTTAGGGACGATCATGATGCTTTTACTGTTGTTATTGGTAGCAGGGCATCTGTTCTTGAA
GGTCAAGAGGATGCTGATGCAAATGTTAAGGATATAACTATAGAGAATTTCTCCGTAGCA
GCTCGTGGAAAAGACCTTTTAAAGAACACATCAGTTAAGATATCTCATGGGAAGAGATAT
GGTTTAGTTGGTCCCAATGGAATGGGCAAGTCCACCCTACTAAAACTCCTTGCTTGGAGG
AAGATTCCTGTACCAAAAAACATTGACGTACTTTTGGTTGAACAAGAGATAGTTGGTGAT
GATAGGACTGCACTTGAAGCTGTTGTTTCAGCTAACGAGGAGCTCATCAAGCTCCGAGAA
GAGGCTGCATCTTTACAGAATGCTGCTGCATCTGTTGGTGAGAATGAAGATGATACTGAT
GGGGACAACATTGTAGAAAAACTTTCTGAACTGTACGAAAGGTTGCAGCTGATGGGATCA
GATGCTGCTGAGGCCCAAGCATCAAAAATTCTTGCTGGGCTGGGTTTCACCAAGGAAATG
CAGGGGCGTGCTACCCGATCTTTTAGTGGTGGTTGGAGGATGAGAATTTCTCTAGCACGG
GCTCTTTTTGTTCAGCCTACTCTATTGCTGTTGGATGAACCTACTAATCATCTTGACCTT
CGGGCTGTTCTATGGTTAGAGGAGTACTTGTGCAGATGGAAGAAAACTCTGGTCGTTGTT
TCACATGATCGAGACTTTCTGAACACTGTTTGCAGTGAGATTATTCATCTCCATGACATG
AAACTACACTTCTATCGTGGTAACTTTGATGATTTTGAAAGTGGATATGAACAGCGTCGC
AAAGAGATGAACAAGAAGTTTGAGATTTATGATAAGCAGTTAAAAGCTGCCAAGAGATCT
GGAAGTCGAGCACAACAGGAGAAGGTAAAAGACCGAGCCAAATTTGTAGCTTCCAAAGAA
TCAAAGAAAAAAGGAAAGGATAGGGTTGATGAAGATGAAACTCCACCTGAAGCACCTCAG
AAGTGGAGGGACTACAGCGTGGAGTTCCACTTCCCTGAGCCTACTGAACTGACACCTCCA
CTTCTTCAGCTAATTGAGGTCAGCTTCAGTTATCCTAATCGACCAGACTTCAGGCTCTCT
GATGTTGATGTTGGAATTGATATGGGGACTCGAGTTGCTATCGTTGGGCCCAATGGAGCA
GGCAAATCGACCTTGCTTAACCTCTTGGCAGGTGATTTAGTTCCTACAGAAGGTGAAGCC
CGCAGGAGTCAAAAGTTGAGGATTGGACGGTACTCACAGCATTTTGTTGATCTTCTCACA
ATGGATGAAACACCTGTCCAGTACCTGCTTCGTCTTCACCCAGATCAAGAGGGACCTAGT
AAGCAAGAAGCTGTTCGTGCAAAGCTAGGAAAATTTGGACTTCCCAGTCATAACCATCTT
ACCCCCATTTTAAAGTTGTCTGGAGGACAAAAAGCTAGAGTTGTATTTACATCTATTTCC
ATGTCGAAGCCTCACATCTTGCTGTTAGATGAGCCAACAAACCATTTGGATATGCAGAGT
ATCGATGCTTTGGCAGATGCGCTTGATGAGTTCACTGGTGGAGTTGTGTTAGTCAGTCAC
GACTCGAGGCTCATATCAAGGGTTTGTGATGATGAAGAAAGAAGTGAAATTTGGATAGTT
GAGAATGGGACCGTTGAAAAGTTCCCAGATACATTTGATGAGTACAAGGCAGAACTTGTA
AGGGAAATCAGGGAAGAAGTTGATGATTGA