Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400059178
CDS Infomation

pacid=37433281 polypeptide=PGSC0003DMP400039853 locus=PGSC0003DMG400022986 ID=PGSC0003DMT400059178.v4.03 annot-version=v4.03
Sequence

ATGGATGGTATGGATGATAGGAGAATGGGTTGTATGGGTGGATTTCTTCAGCTGTTCGAT
CGTAATCACATTTTAGCCGGGAAGAGACTCTATGCTACGAAACGTTTGCCACATTTTACG
GTTCCTGATGATGTGTCTGAGTCCGATAAGTTTAGTGCATCACCGGCAGTTTCAAAGGAG
CTTGGGAAACCACAGCCAAGTCTGGATCAGTCCAAGCAGGCAGCAGTAGAGGTCATTTCT
GTTGAGCCAGCTGTTCCTGTCTCGGTAGCGGTAGCGACACCGCCAAAGTCACCGCTCCCG
CTCCCTCTTCCAATAATTGAAGTAAAAGAAGGGACGAGGTCTTCGTGGAAGTTTTGCAAA
GAAGCTCCGAGGCTCTCATTGGACAGTAGAGCTGTTGTTGATGCTAAAGGAAGTCTTCGA
CCGAGGGGTTCAGTTCTATCAGCTAACAGAGGTGAGAACACAGAGGATGGAGTAGTAGCT
GATTGTGACGACAATCAACGTCCATGCCCGAGTGTCATTGCAAGGCTAATGGGACTTGAA
CCATTACCCCAATCAAACAATGAAACTCTGCCAAAATCAGAGTTGAGAAGATCTGCATCA
GAATCCAGAGTTTCAAGAGATTTGTTTAATGGCCGTTATGTGGATGGAAACCATGTGGAT
TTCATAGAGCTAAACAATACTCGAGCTAATGTATCAAACAATGCAATGAAAGACAATGCA
ACGAATGAACGTAGAAGCACAATGCCAAATGCAAGATCTACGGACCAGATGGGTTATCCT
CTGAAGAATGAGAACACTGAAAGACCAAAGGCTTCAAACAGAAGTTTAACTTCATCGCCG
TGGAAGTCACCTCAGCACAGGAAGTTTTTCTTCGATACAGCAGACATTTTCCCGGAGCCA
AAGCAGACGGTCTCACTCTATGGTGAGATTGACAAGAGACTGAAGATGAGAGGAATTGAC
GAGCCTTCTAAAGATCTCGAGACATTGAAGCAAATCCTTGAGGCTTTGCAACTCAAAGGG
CTCCTTCATAACAAAAGACCGTCCGAGCAGATTGGCCACCGGAATTTTGTATATGATCCT
ACTTTATCATCTGATGAGTCCCCAATAGTCCTTATGAGGCCTTCGAGATCAGTTTCACCA
AGCCATAGAAGAATGGCAAATGGTACATCCCCTTCAAGTTTGAGAAGCCGAAATGTCATT
GGTCGGAGACCCAATCTTTCTAGTGAAAGCCTTCCATCTGTGAGCCCATGTCGGGAACGG
CCTGCTTCTGAACGAAATGCTCGGAGTCCACTAAGATCTAGAGATTCCAGCTCACCAACT
CAAAGAGAAAACAGTGTGAGGCTTTCTAGTTCTGTGGCCAAACCAAAGAATCTGAATGTT
GATAGTCGTAGAAGAGCAGGAGAGCCAATTGAGAATCGAAGAGTTTCTCCAGTACAATCA
CCGAAGCTTAGTTCGAGGAGAAACAGTTTGGAGCATAATGGCTCAAAGGTATCACCTAGA
AACAAAAGAGAAACGACAGAGAGTAAGCAGAAAGAGAAGATCACAACGTTTGTTACAGAG
GACGAGTCATCTTCCATTTCTGAAAGCACTGTTAGCTCATCTTTCCAAATTGATGCGGAG
AGATCAAATTTGGAGGATTACAATGAAGGAAGGAGCCTTTTGGAAAGGTGCGATAAGCTT
CTTAATAGCATAGCAGAGATGACAGCCCCTGAATCACAACCGAGTCCGGTGTCAGTTCTT
GACTCATCATTCTACAGGGACGACTCGCCATCCCCTTCACCTATTATGAAAAGGAACATC
GATTTCAAAGATGTTTCAGGGGAATCGGAGGAAGAAATATGGCTCTCATCATTTTCACCT
GTCCGATCAAAGTCTAACGATTCAACGGATGACTCTCATCTTGGTTACATTTCGGACATC
CTTAGAGCTTCCTGTTATCTGCCTGAAGACTCTGATATATTTTTATTATTGGAGAAGCAG
CAATATCTCAAAGGAAAGGACACCTCCAAGGTCTCCAGACTCCAACGGAAGCTGATCTTC
GACACTATAACTGAAATTCTTGATAGAAACAGACAACTACCTCCATGGAAAGCATTTTCC
TGGTCAGGTTCATCTATTGCAAAGCCATCACTTGAAGGCATTTGGACCGAGTTCCAAAGA
ATCCAAGAAAGGGAAAGTGGTAACAATTTGGTTGAGATCATCTGTGAAGTTCTCAAGAAA
GACCTGGCTCAAGACACTGTCAATGGTTGGGGAGACTGTCCGGTTGAGATGTCCGAGGCA
GTTTTGGACATGGAAAGGCAGATATTCAAGGATTTGATAGTCGAAACGATCCAAGACCTT
GCTGTGATTGGCTTCAAAACTACCCTCTTAACCGCTTCCCGTAGGAAGTTAGTTTTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400039853
PEP Infomation

pacid=37433281 transcript=PGSC0003DMT400059178 locus=PGSC0003DMG400022986 ID=PGSC0003DMT400059178.v4.03 annot-version=v4.03
Sequence

MDGMDDRRMGCMGGFLQLFDRNHILAGKRLYATKRLPHFTVPDDVSESDKFSASPAVSKE
LGKPQPSLDQSKQAAVEVISVEPAVPVSVAVATPPKSPLPLPLPIIEVKEGTRSSWKFCK
EAPRLSLDSRAVVDAKGSLRPRGSVLSANRGENTEDGVVADCDDNQRPCPSVIARLMGLE
PLPQSNNETLPKSELRRSASESRVSRDLFNGRYVDGNHVDFIELNNTRANVSNNAMKDNA
TNERRSTMPNARSTDQMGYPLKNENTERPKASNRSLTSSPWKSPQHRKFFFDTADIFPEP
KQTVSLYGEIDKRLKMRGIDEPSKDLETLKQILEALQLKGLLHNKRPSEQIGHRNFVYDP
TLSSDESPIVLMRPSRSVSPSHRRMANGTSPSSLRSRNVIGRRPNLSSESLPSVSPCRER
PASERNARSPLRSRDSSSPTQRENSVRLSSSVAKPKNLNVDSRRRAGEPIENRRVSPVQS
PKLSSRRNSLEHNGSKVSPRNKRETTESKQKEKITTFVTEDESSSISESTVSSSFQIDAE
RSNLEDYNEGRSLLERCDKLLNSIAEMTAPESQPSPVSVLDSSFYRDDSPSPSPIMKRNI
DFKDVSGESEEEIWLSSFSPVRSKSNDSTDDSHLGYISDILRASCYLPEDSDIFLLLEKQ
QYLKGKDTSKVSRLQRKLIFDTITEILDRNRQLPPWKAFSWSGSSIAKPSLEGIWTEFQR
IQERESGNNLVEIICEVLKKDLAQDTVNGWGDCPVEMSEAVLDMERQIFKDLIVETIQDL
AVIGFKTTLLTASRRKLVF*

Transcript Sequence

Transcript ID

PGSC0003DMT400059178
Transcript Infomation

pacid=37433281 locus=PGSC0003DMG400022986 ID=PGSC0003DMT400059178.v4.03 annot-version=v4.03
Sequence

ATGGATGGTATGGATGATAGGAGAATGGGTTGTATGGGTGGATTTCTTCAGCTGTTCGAT
CGTAATCACATTTTAGCCGGGAAGAGACTCTATGCTACGAAACGTTTGCCACATTTTACG
GTTCCTGATGATGTGTCTGAGTCCGATAAGTTTAGTGCATCACCGGCAGTTTCAAAGGAG
CTTGGGAAACCACAGCCAAGTCTGGATCAGTCCAAGCAGGCAGCAGTAGAGGTCATTTCT
GTTGAGCCAGCTGTTCCTGTCTCGGTAGCGGTAGCGACACCGCCAAAGTCACCGCTCCCG
CTCCCTCTTCCAATAATTGAAGTAAAAGAAGGGACGAGGTCTTCGTGGAAGTTTTGCAAA
GAAGCTCCGAGGCTCTCATTGGACAGTAGAGCTGTTGTTGATGCTAAAGGAAGTCTTCGA
CCGAGGGGTTCAGTTCTATCAGCTAACAGAGGTGAGAACACAGAGGATGGAGTAGTAGCT
GATTGTGACGACAATCAACGTCCATGCCCGAGTGTCATTGCAAGGCTAATGGGACTTGAA
CCATTACCCCAATCAAACAATGAAACTCTGCCAAAATCAGAGTTGAGAAGATCTGCATCA
GAATCCAGAGTTTCAAGAGATTTGTTTAATGGCCGTTATGTGGATGGAAACCATGTGGAT
TTCATAGAGCTAAACAATACTCGAGCTAATGTATCAAACAATGCAATGAAAGACAATGCA
ACGAATGAACGTAGAAGCACAATGCCAAATGCAAGATCTACGGACCAGATGGGTTATCCT
CTGAAGAATGAGAACACTGAAAGACCAAAGGCTTCAAACAGAAGTTTAACTTCATCGCCG
TGGAAGTCACCTCAGCACAGGAAGTTTTTCTTCGATACAGCAGACATTTTCCCGGAGCCA
AAGCAGACGGTCTCACTCTATGGTGAGATTGACAAGAGACTGAAGATGAGAGGAATTGAC
GAGCCTTCTAAAGATCTCGAGACATTGAAGCAAATCCTTGAGGCTTTGCAACTCAAAGGG
CTCCTTCATAACAAAAGACCGTCCGAGCAGATTGGCCACCGGAATTTTGTATATGATCCT
ACTTTATCATCTGATGAGTCCCCAATAGTCCTTATGAGGCCTTCGAGATCAGTTTCACCA
AGCCATAGAAGAATGGCAAATGGTACATCCCCTTCAAGTTTGAGAAGCCGAAATGTCATT
GGTCGGAGACCCAATCTTTCTAGTGAAAGCCTTCCATCTGTGAGCCCATGTCGGGAACGG
CCTGCTTCTGAACGAAATGCTCGGAGTCCACTAAGATCTAGAGATTCCAGCTCACCAACT
CAAAGAGAAAACAGTGTGAGGCTTTCTAGTTCTGTGGCCAAACCAAAGAATCTGAATGTT
GATAGTCGTAGAAGAGCAGGAGAGCCAATTGAGAATCGAAGAGTTTCTCCAGTACAATCA
CCGAAGCTTAGTTCGAGGAGAAACAGTTTGGAGCATAATGGCTCAAAGGTATCACCTAGA
AACAAAAGAGAAACGACAGAGAGTAAGCAGAAAGAGAAGATCACAACGTTTGTTACAGAG
GACGAGTCATCTTCCATTTCTGAAAGCACTGTTAGCTCATCTTTCCAAATTGATGCGGAG
AGATCAAATTTGGAGGATTACAATGAAGGAAGGAGCCTTTTGGAAAGGTGCGATAAGCTT
CTTAATAGCATAGCAGAGATGACAGCCCCTGAATCACAACCGAGTCCGGTGTCAGTTCTT
GACTCATCATTCTACAGGGACGACTCGCCATCCCCTTCACCTATTATGAAAAGGAACATC
GATTTCAAAGATGTTTCAGGGGAATCGGAGGAAGAAATATGGCTCTCATCATTTTCACCT
GTCCGATCAAAGTCTAACGATTCAACGGATGACTCTCATCTTGGTTACATTTCGGACATC
CTTAGAGCTTCCTGTTATCTGCCTGAAGACTCTGATATATTTTTATTATTGGAGAAGCAG
CAATATCTCAAAGGAAAGGACACCTCCAAGGTCTCCAGACTCCAACGGAAGCTGATCTTC
GACACTATAACTGAAATTCTTGATAGAAACAGACAACTACCTCCATGGAAAGCATTTTCC
TGGTCAGGTTCATCTATTGCAAAGCCATCACTTGAAGGCATTTGGACCGAGTTCCAAAGA
ATCCAAGAAAGGGAAAGTGGTAACAATTTGGTTGAGATCATCTGTGAAGTTCTCAAGAAA
GACCTGGCTCAAGACACTGTCAATGGTTGGGGAGACTGTCCGGTTGAGATGTCCGAGGCA
GTTTTGGACATGGAAAGGCAGATATTCAAGGATTTGATAGTCGAAACGATCCAAGACCTT
GCTGTGATTGGCTTCAAAACTACCCTCTTAACCGCTTCCCGTAGGAAGTTAGTTTTCTAA