Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400059077
CDS Infomation

pacid=37460801 polypeptide=PGSC0003DMP400039793 locus=PGSC0003DMG400022947 ID=PGSC0003DMT400059077.v4.03 annot-version=v4.03
Sequence

ATGGCAGTTGTTACAGTGTTGAGGGGCGTCTCTCATGGCCGCTTACCACTACTCCCTCAC
TCTCAGTTGCCGATAGTTAGACCAAGAAACATTGCTTATCGGAATCGTCCCAATGTTTTG
CGAGTTTTTGCTCGTTATTCTCAGGCACAGGATCTATTTACTTCTCGTCTTCAAGATCGT
CTAGAGAACTTGCCCAAACTTGTGGAGGATATTGTCCAAACATCTCTAAGCACAGGTCCT
CGTGGAGCCTTAAGGTTAGCTCAGGGTGTCCAAGCTGTAGTTGGAGTAGGCAGTGAGTGG
CTGCAAGATATATCTAAGACGGCAAACTCGTCCACTGGACTACCGACTCAGCTGCAGCTT
GGGCTATTATCTCCCCTATATTTGAGGAAATTGTTTGAACGCATGGGTGCAACTTATATC
AAATTAGGTCAGTTTATTGCATCCGCACCCACGTTGTTTCCACCGGAGTATGTTCAAGAA
TTCCAGTACTGTTTTGACAGGGCTCCTGCAGTTCCTTATGAACAGATCCAAACAATCTTG
CGTGAGGAACTAGGCAGACCAATTGATACCGTGTTCGAATATATTGATCCCACACCAGTT
GCCTCTGCATCGATTGCTCAGGTGCATGGTGCAAGAATAAGAGGCACAGGAGAGGATGTA
GTGATAAAGGTTTTGAAACCTGGAATAGAAGATATTTTGGTTGCAGATTTGAACTTTATT
TACATTGCAGCACGTATCCTGGAGTTTTTGAGTCCCGATCTAAGCCGTGCATCTCTGGTT
GCTATTGTCAAAGACATACGAGAATCAATGCTAGAAGAAGTTGACTTCAACAAGGAGGCT
ACAAATGTTGAGTCATTTAGGAGTTATTTAGCAGCCATGGGACTAACTAGGCAGGCCACT
GCTCCAAAAGTCTACCGTCAATATAGTACTAAGCGTGTTTTGACTATGGAGAGGCTATAT
GGAGTACCTTTGACAGACTTAGACTCTATTAAGTCACTGGTTTCCAGTCCTGAGACCAGT
CTTATTACTGCCCTAAATGTTTGGTTTGGAAGTCTGCTTGCCTGTGAATCTTTCCATGCC
GATGTACATGCTGGCAATTTGTGGCAACTACGTGATGGGCGTATTGGGTTCCTTGACTTC
GGAATTGTTGGTCGTATATCTCCAAAGACATGGGCTGCTATGGAAGTATTTCTGCAATCT
ATAGCAATTGAAGATTATGAGTCGATGGCATCTGCTCTAATTGACATGGGTGCTACTGGA
AAGGATGTGGACTCGAAGGCTTTTGCGAGGGACTTGGAGAAAATATTTTTGTCAATTCAG
GATTTAGATACAGAAATCGTTGTTGCAGCTGCCAGGGACACAAGTACAAATGCTACTACT
GTTGCTGCCAATGTAGCATTTGATGAGAGACAGATGAATGCACTATTTCTGGACGTGGTT
AGAGTTAGTGAATCTTATGGATTGAAATTTCCTCGTGAGTTTGCGCTTCTGATGAAGCAA
CTTCTCTATTTTGACCGCTACACCAGATTGTTAGCTCCAAACATGAACATGTATCGAGAT
CAGAGGATCAACGTCGTCTCTAATCAAAGACAAAGGAACATATACCAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400039793
PEP Infomation

pacid=37460801 transcript=PGSC0003DMT400059077 locus=PGSC0003DMG400022947 ID=PGSC0003DMT400059077.v4.03 annot-version=v4.03
Sequence

MAVVTVLRGVSHGRLPLLPHSQLPIVRPRNIAYRNRPNVLRVFARYSQAQDLFTSRLQDR
LENLPKLVEDIVQTSLSTGPRGALRLAQGVQAVVGVGSEWLQDISKTANSSTGLPTQLQL
GLLSPLYLRKLFERMGATYIKLGQFIASAPTLFPPEYVQEFQYCFDRAPAVPYEQIQTIL
REELGRPIDTVFEYIDPTPVASASIAQVHGARIRGTGEDVVIKVLKPGIEDILVADLNFI
YIAARILEFLSPDLSRASLVAIVKDIRESMLEEVDFNKEATNVESFRSYLAAMGLTRQAT
APKVYRQYSTKRVLTMERLYGVPLTDLDSIKSLVSSPETSLITALNVWFGSLLACESFHA
DVHAGNLWQLRDGRIGFLDFGIVGRISPKTWAAMEVFLQSIAIEDYESMASALIDMGATG
KDVDSKAFARDLEKIFLSIQDLDTEIVVAAARDTSTNATTVAANVAFDERQMNALFLDVV
RVSESYGLKFPREFALLMKQLLYFDRYTRLLAPNMNMYRDQRINVVSNQRQRNIYQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400059077
Transcript Infomation

pacid=37460801 locus=PGSC0003DMG400022947 ID=PGSC0003DMT400059077.v4.03 annot-version=v4.03
Sequence

ATGGCAGTTGTTACAGTGTTGAGGGGCGTCTCTCATGGCCGCTTACCACTACTCCCTCAC
TCTCAGTTGCCGATAGTTAGACCAAGAAACATTGCTTATCGGAATCGTCCCAATGTTTTG
CGAGTTTTTGCTCGTTATTCTCAGGCACAGGATCTATTTACTTCTCGTCTTCAAGATCGT
CTAGAGAACTTGCCCAAACTTGTGGAGGATATTGTCCAAACATCTCTAAGCACAGGTCCT
CGTGGAGCCTTAAGGTTAGCTCAGGGTGTCCAAGCTGTAGTTGGAGTAGGCAGTGAGTGG
CTGCAAGATATATCTAAGACGGCAAACTCGTCCACTGGACTACCGACTCAGCTGCAGCTT
GGGCTATTATCTCCCCTATATTTGAGGAAATTGTTTGAACGCATGGGTGCAACTTATATC
AAATTAGGTCAGTTTATTGCATCCGCACCCACGTTGTTTCCACCGGAGTATGTTCAAGAA
TTCCAGTACTGTTTTGACAGGGCTCCTGCAGTTCCTTATGAACAGATCCAAACAATCTTG
CGTGAGGAACTAGGCAGACCAATTGATACCGTGTTCGAATATATTGATCCCACACCAGTT
GCCTCTGCATCGATTGCTCAGGTGCATGGTGCAAGAATAAGAGGCACAGGAGAGGATGTA
GTGATAAAGGTTTTGAAACCTGGAATAGAAGATATTTTGGTTGCAGATTTGAACTTTATT
TACATTGCAGCACGTATCCTGGAGTTTTTGAGTCCCGATCTAAGCCGTGCATCTCTGGTT
GCTATTGTCAAAGACATACGAGAATCAATGCTAGAAGAAGTTGACTTCAACAAGGAGGCT
ACAAATGTTGAGTCATTTAGGAGTTATTTAGCAGCCATGGGACTAACTAGGCAGGCCACT
GCTCCAAAAGTCTACCGTCAATATAGTACTAAGCGTGTTTTGACTATGGAGAGGCTATAT
GGAGTACCTTTGACAGACTTAGACTCTATTAAGTCACTGGTTTCCAGTCCTGAGACCAGT
CTTATTACTGCCCTAAATGTTTGGTTTGGAAGTCTGCTTGCCTGTGAATCTTTCCATGCC
GATGTACATGCTGGCAATTTGTGGCAACTACGTGATGGGCGTATTGGGTTCCTTGACTTC
GGAATTGTTGGTCGTATATCTCCAAAGACATGGGCTGCTATGGAAGTATTTCTGCAATCT
ATAGCAATTGAAGATTATGAGTCGATGGCATCTGCTCTAATTGACATGGGTGCTACTGGA
AAGGATGTGGACTCGAAGGCTTTTGCGAGGGACTTGGAGAAAATATTTTTGTCAATTCAG
GATTTAGATACAGAAATCGTTGTTGCAGCTGCCAGGGACACAAGTACAAATGCTACTACT
GTTGCTGCCAATGTAGCATTTGATGAGAGACAGATGAATGCACTATTTCTGGACGTGGTT
AGAGTTAGTGAATCTTATGGATTGAAATTTCCTCGTGAGTTTGCGCTTCTGATGAAGCAA
CTTCTCTATTTTGACCGCTACACCAGATTGTTAGCTCCAAACATGAACATGTATCGAGAT
CAGAGGATCAACGTCGTCTCTAATCAAAGACAAAGGAACATATACCAATGA