Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400059062
CDS Infomation

pacid=37467221 polypeptide=PGSC0003DMP400039787 locus=PGSC0003DMG400022939 ID=PGSC0003DMT400059062.v4.03 annot-version=v4.03
Sequence

ATGGCACCAAGCAAACTTAGAAAAGCAATTGGGGCTGTGAAGGACCAAACAAGCATAAGT
CTAGCAAAGGTAGGAGGAAGCAATTGTTTGTCCGACCTAGAAGTTGCGATTGTTAAGGCT
ACTAGACACCAAGAGTACCCGCCTGAGGAGAGGCACATTCGAGAGATTCTAAGCTTGACT
GCTTATTCTCGAGCCAATATTGGTGCTTGTGTTGATAACATTTCAAGACGTCTTGGCAAG
ACAAAGAATTGGGTTGTGGCGCTCAAGTCAATAATGTTGATCCATAGATTGCTATCCGAT
GGCGATCCCTCCTATGAGCAGGAAATTTTCTTTGCCACAAGACAAGGAACAAGGCTTCTT
AACATGTCTGAGTTTCGAGATACCAGATCTAATTCATGGGACTATTCTTCACTTGTTCGT
ACCTATTCTTTGTACCTTGATGAACAACTTGAGTATAGGATGCAGAGTCGGCGTGGAAAG
CGCAGTGCCTACGCCTATGATGAAGAGTTAGACAATGTTGAACCTGAAACTGTCGTGGTG
AAACAACCCACTCCGTTGAGCGAAATGAAGAATGAGCACATTTTCTCAAGGATGCAATAT
CTCGTCCAACTTCTTGACCGATTTTTAGCTTGTAAACCCGCAGGTTTGGCAAGGACCAAC
AGAACTGTATTTGTGGCTCTATATCCACTTGTGAATGAGAGTTTCCAGATATATTATCAA
ATAACAGAAATAATAACTATCTTGATTGATAAGTTCCAAGAACTATCAATTCCCGAATCT
GTCAAGGTTCACGAGATCTTCTGTCGTATTAACAAACAATATGTTGATCTTGAACAGTTC
TACAATTGGTGTAAAACAGTTGGAATTGGACGATCTTCTGAATATCCAGATATTGAGAAC
ATTCCACAAAAGAAACTTGACCTTATCGATGATTTTATACGGGAGAAGTCCATATTGGGA
CAGAATGGAAATGCAATGCGTTATGAACCTAAAAGTGAGCTGGTTGAAAAAACTCAAGAG
CCAGAGCCAGAACCAGAACCAGAACAGGCGATGAATGAAATAAAGGCATTACCACCACCA
GAGGGAATTCCTGAAGAAATAAAGGAGGAGAAACACGAAGAAGAAAATAAAGAGGTGGTG
AAAACCCAAGACGTAGCTGACTTTTTGAACTTGGGTGAAAATTCATTAACTATGGAAGAA
CATGGAGATCAATTGGCTGTAGCACTCTTTGATGGTGGTGGTCCAACAACTGATGGTCCT
TCAACAACTACTTCACCGTGGGAAGCGTTCAACAATTCAGGGGATTGGGAAACAGCACTT
GTTCAGCACACGAGCCATTTGTCAAACCAGAAGGCTTCCCTTCCTGGAGGTTTCAACACA
TTAATGCTAGATGGAATGTATCAACAAGGAGCAGTAGCTCAAGTGGTAGCCAGCTCAGGT
GTTGTAGCTACTGGAAGTGCTAGCAGTGTCGCGCTTGGATCAGCTGGTCGGCCATCAATG
CTAGCCTTGCCTGCACCTCCATCAGCAGACGGCGAAGCTCAAAGTATAGCCGGTACAACC
ACTGATCCTTTTGCAGCATCACTAGCAATAGCTCCACCATCATATGTTCAAATGTCAGAA
ATGGAAAAGAAGCAGAGACTATTAGTAGATGAGCAAGTAATGTGGCAACAATATCAAAAG
GATGGAATGCAAGGACAAGTAGGATTAGCAAGGACGACACAATCAAACCCTTATGCATAC
AACACAGGAGGTTTACACACAAACCTTCTAGCTAGAGGTTCCCTAAATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400039787
PEP Infomation

pacid=37467221 transcript=PGSC0003DMT400059062 locus=PGSC0003DMG400022939 ID=PGSC0003DMT400059062.v4.03 annot-version=v4.03
Sequence

MAPSKLRKAIGAVKDQTSISLAKVGGSNCLSDLEVAIVKATRHQEYPPEERHIREILSLT
AYSRANIGACVDNISRRLGKTKNWVVALKSIMLIHRLLSDGDPSYEQEIFFATRQGTRLL
NMSEFRDTRSNSWDYSSLVRTYSLYLDEQLEYRMQSRRGKRSAYAYDEELDNVEPETVVV
KQPTPLSEMKNEHIFSRMQYLVQLLDRFLACKPAGLARTNRTVFVALYPLVNESFQIYYQ
ITEIITILIDKFQELSIPESVKVHEIFCRINKQYVDLEQFYNWCKTVGIGRSSEYPDIEN
IPQKKLDLIDDFIREKSILGQNGNAMRYEPKSELVEKTQEPEPEPEPEQAMNEIKALPPP
EGIPEEIKEEKHEEENKEVVKTQDVADFLNLGENSLTMEEHGDQLAVALFDGGGPTTDGP
STTTSPWEAFNNSGDWETALVQHTSHLSNQKASLPGGFNTLMLDGMYQQGAVAQVVASSG
VVATGSASSVALGSAGRPSMLALPAPPSADGEAQSIAGTTTDPFAASLAIAPPSYVQMSE
MEKKQRLLVDEQVMWQQYQKDGMQGQVGLARTTQSNPYAYNTGGLHTNLLARGSLN*

Transcript Sequence

Transcript ID

PGSC0003DMT400059062
Transcript Infomation

pacid=37467221 locus=PGSC0003DMG400022939 ID=PGSC0003DMT400059062.v4.03 annot-version=v4.03
Sequence

ATGGCACCAAGCAAACTTAGAAAAGCAATTGGGGCTGTGAAGGACCAAACAAGCATAAGT
CTAGCAAAGGTAGGAGGAAGCAATTGTTTGTCCGACCTAGAAGTTGCGATTGTTAAGGCT
ACTAGACACCAAGAGTACCCGCCTGAGGAGAGGCACATTCGAGAGATTCTAAGCTTGACT
GCTTATTCTCGAGCCAATATTGGTGCTTGTGTTGATAACATTTCAAGACGTCTTGGCAAG
ACAAAGAATTGGGTTGTGGCGCTCAAGTCAATAATGTTGATCCATAGATTGCTATCCGAT
GGCGATCCCTCCTATGAGCAGGAAATTTTCTTTGCCACAAGACAAGGAACAAGGCTTCTT
AACATGTCTGAGTTTCGAGATACCAGATCTAATTCATGGGACTATTCTTCACTTGTTCGT
ACCTATTCTTTGTACCTTGATGAACAACTTGAGTATAGGATGCAGAGTCGGCGTGGAAAG
CGCAGTGCCTACGCCTATGATGAAGAGTTAGACAATGTTGAACCTGAAACTGTCGTGGTG
AAACAACCCACTCCGTTGAGCGAAATGAAGAATGAGCACATTTTCTCAAGGATGCAATAT
CTCGTCCAACTTCTTGACCGATTTTTAGCTTGTAAACCCGCAGGTTTGGCAAGGACCAAC
AGAACTGTATTTGTGGCTCTATATCCACTTGTGAATGAGAGTTTCCAGATATATTATCAA
ATAACAGAAATAATAACTATCTTGATTGATAAGTTCCAAGAACTATCAATTCCCGAATCT
GTCAAGGTTCACGAGATCTTCTGTCGTATTAACAAACAATATGTTGATCTTGAACAGTTC
TACAATTGGTGTAAAACAGTTGGAATTGGACGATCTTCTGAATATCCAGATATTGAGAAC
ATTCCACAAAAGAAACTTGACCTTATCGATGATTTTATACGGGAGAAGTCCATATTGGGA
CAGAATGGAAATGCAATGCGTTATGAACCTAAAAGTGAGCTGGTTGAAAAAACTCAAGAG
CCAGAGCCAGAACCAGAACCAGAACAGGCGATGAATGAAATAAAGGCATTACCACCACCA
GAGGGAATTCCTGAAGAAATAAAGGAGGAGAAACACGAAGAAGAAAATAAAGAGGTGGTG
AAAACCCAAGACGTAGCTGACTTTTTGAACTTGGGTGAAAATTCATTAACTATGGAAGAA
CATGGAGATCAATTGGCTGTAGCACTCTTTGATGGTGGTGGTCCAACAACTGATGGTCCT
TCAACAACTACTTCACCGTGGGAAGCGTTCAACAATTCAGGGGATTGGGAAACAGCACTT
GTTCAGCACACGAGCCATTTGTCAAACCAGAAGGCTTCCCTTCCTGGAGGTTTCAACACA
TTAATGCTAGATGGAATGTATCAACAAGGAGCAGTAGCTCAAGTGGTAGCCAGCTCAGGT
GTTGTAGCTACTGGAAGTGCTAGCAGTGTCGCGCTTGGATCAGCTGGTCGGCCATCAATG
CTAGCCTTGCCTGCACCTCCATCAGCAGACGGCGAAGCTCAAAGTATAGCCGGTACAACC
ACTGATCCTTTTGCAGCATCACTAGCAATAGCTCCACCATCATATGTTCAAATGTCAGAA
ATGGAAAAGAAGCAGAGACTATTAGTAGATGAGCAAGTAATGTGGCAACAATATCAAAAG
GATGGAATGCAAGGACAAGTAGGATTAGCAAGGACGACACAATCAAACCCTTATGCATAC
AACACAGGAGGTTTACACACAAACCTTCTAGCTAGAGGTTCCCTAAATTAA