Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400059042
CDS Infomation

pacid=37466000 polypeptide=PGSC0003DMP400039771 locus=PGSC0003DMG400022932 ID=PGSC0003DMT400059042.v4.03 annot-version=v4.03
Sequence

ATGTCTATGTTTCTTGCAATCAAAAGCCAGTGCCTTTTTCCTTATCAGAGTCATTTCAAG
AATCGCCCAATTGAACTTGTTTTGCCTCAGACTTTTTTTCCAAGATTCAGAAATGGACCC
AGATACCGCAATTGCATCCTGGCGAAAGCTGAAGACAAAGCCAGAGAAAATTCGGACCGG
CAGCTTGAGGAACTAACAACATCATCAGGAACATGTGATCCTTTGTGTTCAGTTGATGAA
ACAAGCTCACAAGAATTTGAAGCTACTTACCAACCGAAGACAGATTTCCTGAAGGCCTTT
GCCATTCTTGCTGCAGCTGTCACTGGTACAATAGCAATAAATCAATCATGGGTGGCTGCA
AATCAGGATATTGCAATGGCGTTGTTGTTTGGAGTAGGATATATGGGCATCATATTTGAA
GAGTCTCTTGCATTCAACAAAAGTGGAGTAGGACTTCTGATGGCCGTGAGTTTATGGGTC
ATCCGAAGCATTGGGGCCCCTTCAAATGACATAGCTCTTTCCCAGTTGTCACATGCGACT
GCTGAAGTTAGTGAAATAGTGTTCTTTTTGCTTGGTGCAATGACCATCGTTGAGATAGTT
GATGCTCATCAGGGATTTAAGCTGGTTACAGATAACATCACTACTCGCAAGCCAATAACT
CTGCTTTGGGTGGTAGGTTTTGTGACTTTCTTCCTCAGTTCAATCCTTGACAATCTGACT
TCTACAATTGTGATGGTCTCCTTATTGAGGAAACTGGCACCACCTTCAGAATACCGAAAG
CTTCTTGGCGCTGTTGTTGTTATAGCAGCAAATGCTGGTGGAGCATGGACTCCCATAGGT
GATGTTACAACTACAATGCTCTGGATACATGGCCAAATATCCACATTACCGACGATGAAG
GGTTTATTTTTACCATCAGTAGTTTCTCTAGCTGTTCCTTTGGCTCTGCTGTCCCTTACA
AGTGAAGTGAATGGGAAAGGACAAAATTCCGCTGAGGTTCTGGCATCCGAACAGATGGCT
CCTCGAGGACAGCTAGTTTTTGCAGTAGGACTTGGGGCTTTAGTGTTTGTACCAGTTTTC
AAGGCCTTGACTGGTCTACCACCGTACATGGGTATGCTGCTTGGACTGGGAGTTCTTTGG
ATAATCACAGATGCGATTCACTATGGAGAATCTGAAAGACAGCGGTTGAAAGTACCACAG
GCTTTATCACGCATTGACACTCAAGGAGCTCTTTTCTTCCTTGGAATCCTATTGTCCGTT
AGCAGCCTGGAAGCAGCAGGTATTCTGCGAGAATTGGCAAATTACCTTGATGCCCATATA
CCAAGTACTGAACTCATTGCAAGCTCAATCGGGGTTGTGTCAGCAATCATTGACAATGTT
CCTCTGGTTGCAGCCACCATGGGAATGTATGACCTATCTTCCTTTCCCCAAGATTCTGAA
TTCTGGCAGCTAATAGCATTTTGTGCCGGTACTGGCGGATCTATGCTAGTAATCGGTTCA
GCAGCTGGAGTAGCATTTATGGGAATGGAAAAAGTCGACTTCTTTTGGTATCTGAGAAAG
GTTAGTGGGTTTGCTTTTGCTGGTTATGCTGCCGGTATTGCTACGTATCTTGCAGTACAT
AATCTCAACATCTCACTCCCTACAGCTCTGGCTCAAATTCCTTTCCTTCATGGATCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400039771
PEP Infomation

pacid=37466000 transcript=PGSC0003DMT400059042 locus=PGSC0003DMG400022932 ID=PGSC0003DMT400059042.v4.03 annot-version=v4.03
Sequence

MSMFLAIKSQCLFPYQSHFKNRPIELVLPQTFFPRFRNGPRYRNCILAKAEDKARENSDR
QLEELTTSSGTCDPLCSVDETSSQEFEATYQPKTDFLKAFAILAAAVTGTIAINQSWVAA
NQDIAMALLFGVGYMGIIFEESLAFNKSGVGLLMAVSLWVIRSIGAPSNDIALSQLSHAT
AEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPITLLWVVGFVTFFLSSILDNLT
STIVMVSLLRKLAPPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTLPTMK
GLFLPSVVSLAVPLALLSLTSEVNGKGQNSAEVLASEQMAPRGQLVFAVGLGALVFVPVF
KALTGLPPYMGMLLGLGVLWIITDAIHYGESERQRLKVPQALSRIDTQGALFFLGILLSV
SSLEAAGILRELANYLDAHIPSTELIASSIGVVSAIIDNVPLVAATMGMYDLSSFPQDSE
FWQLIAFCAGTGGSMLVIGSAAGVAFMGMEKVDFFWYLRKVSGFAFAGYAAGIATYLAVH
NLNISLPTALAQIPFLHGS*

Transcript Sequence

Transcript ID

PGSC0003DMT400059042
Transcript Infomation

pacid=37466000 locus=PGSC0003DMG400022932 ID=PGSC0003DMT400059042.v4.03 annot-version=v4.03
Sequence

ATGTCTATGTTTCTTGCAATCAAAAGCCAGTGCCTTTTTCCTTATCAGAGTCATTTCAAG
AATCGCCCAATTGAACTTGTTTTGCCTCAGACTTTTTTTCCAAGATTCAGAAATGGACCC
AGATACCGCAATTGCATCCTGGCGAAAGCTGAAGACAAAGCCAGAGAAAATTCGGACCGG
CAGCTTGAGGAACTAACAACATCATCAGGAACATGTGATCCTTTGTGTTCAGTTGATGAA
ACAAGCTCACAAGAATTTGAAGCTACTTACCAACCGAAGACAGATTTCCTGAAGGCCTTT
GCCATTCTTGCTGCAGCTGTCACTGGTACAATAGCAATAAATCAATCATGGGTGGCTGCA
AATCAGGATATTGCAATGGCGTTGTTGTTTGGAGTAGGATATATGGGCATCATATTTGAA
GAGTCTCTTGCATTCAACAAAAGTGGAGTAGGACTTCTGATGGCCGTGAGTTTATGGGTC
ATCCGAAGCATTGGGGCCCCTTCAAATGACATAGCTCTTTCCCAGTTGTCACATGCGACT
GCTGAAGTTAGTGAAATAGTGTTCTTTTTGCTTGGTGCAATGACCATCGTTGAGATAGTT
GATGCTCATCAGGGATTTAAGCTGGTTACAGATAACATCACTACTCGCAAGCCAATAACT
CTGCTTTGGGTGGTAGGTTTTGTGACTTTCTTCCTCAGTTCAATCCTTGACAATCTGACT
TCTACAATTGTGATGGTCTCCTTATTGAGGAAACTGGCACCACCTTCAGAATACCGAAAG
CTTCTTGGCGCTGTTGTTGTTATAGCAGCAAATGCTGGTGGAGCATGGACTCCCATAGGT
GATGTTACAACTACAATGCTCTGGATACATGGCCAAATATCCACATTACCGACGATGAAG
GGTTTATTTTTACCATCAGTAGTTTCTCTAGCTGTTCCTTTGGCTCTGCTGTCCCTTACA
AGTGAAGTGAATGGGAAAGGACAAAATTCCGCTGAGGTTCTGGCATCCGAACAGATGGCT
CCTCGAGGACAGCTAGTTTTTGCAGTAGGACTTGGGGCTTTAGTGTTTGTACCAGTTTTC
AAGGCCTTGACTGGTCTACCACCGTACATGGGTATGCTGCTTGGACTGGGAGTTCTTTGG
ATAATCACAGATGCGATTCACTATGGAGAATCTGAAAGACAGCGGTTGAAAGTACCACAG
GCTTTATCACGCATTGACACTCAAGGAGCTCTTTTCTTCCTTGGAATCCTATTGTCCGTT
AGCAGCCTGGAAGCAGCAGGTATTCTGCGAGAATTGGCAAATTACCTTGATGCCCATATA
CCAAGTACTGAACTCATTGCAAGCTCAATCGGGGTTGTGTCAGCAATCATTGACAATGTT
CCTCTGGTTGCAGCCACCATGGGAATGTATGACCTATCTTCCTTTCCCCAAGATTCTGAA
TTCTGGCAGCTAATAGCATTTTGTGCCGGTACTGGCGGATCTATGCTAGTAATCGGTTCA
GCAGCTGGAGTAGCATTTATGGGAATGGAAAAAGTCGACTTCTTTTGGTATCTGAGAAAG
GTTAGTGGGTTTGCTTTTGCTGGTTATGCTGCCGGTATTGCTACGTATCTTGCAGTACAT
AATCTCAACATCTCACTCCCTACAGCTCTGGCTCAAATTCCTTTCCTTCATGGATCTTGA