Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058976
CDS Infomation

pacid=37460473 polypeptide=PGSC0003DMP400039732 locus=PGSC0003DMG400022904 ID=PGSC0003DMT400058976.v4.03 annot-version=v4.03
Sequence

ATGGCAGCCCTCGTACCAGGAGTACTGATTAAGCTTCTCCAGAGTATGCATTCCAATAAA
AAGGTTCGTGGGGAATATAGATCAATCCTTTTACAAGTCATCAGCATTGTCCCTGCCTTG
AATGGTTCAGAACTATGGCCAAACCATGGTTTCTTTGTTAAAGTTTCGGATTCTTCTCAT
TCGACATATGTTACATTATCCAAAGAGGAGAATGAGCTCATATTGAACAACAAATTGCAA
CTTGGCCAGCTCTTTTATGTTGAAAGAATGGAGCCTGGAACTCCAGTTCCAGTTTTAGTA
GGGGTGAGGCCACTTCCAGGGCGACATCCATTTGTAGGTAACCCGAAGGATTTAATGCAA
ATGTTGGAACCATCTGAAGTCACTGTTCGAAATGCTCAGGAAGATGTAAATGGTTCGAAG
TTGAATGAATCGCCTGAATTGAACAAAGCGGACACTAAGAACAAATTTGTTATCAAAGAG
CAAAAGACGGTTGTTGCTTCCAGGTACATGCGAGGAGTATTAACCTCTAACACAAAGATT
GGAGGGCTTGATCAAGGTACTGGTGTGAAAGGCATTGAGAATGAGAGCAGTGGAGCTGCT
AAAAAGGCCGTACCTCTGAAAGAGAAACAATGCGAGCTTAAAGGTCAGACACGGTCTTCA
ACTCCTTTCCGCAGCCAGTCTGATGCATTTGTGATAAACTCAGGCATAAATAAGCATATG
AAAACTCCAATATTTTCAACATTGAAACTCACAACAAGCAAACAAGAAAGCATCAGAGAA
AACAGTCAATCCTCGGAAGCGTACATGCCCTGGTCCTCGCTACCAACCAACCTTGCAAAG
CCTGGGAAGGGGATACTTAGGAGGGGATTATTAGCTTCTTTAGTAGCAGCAGAAGCTCAA
GAAGAAGCGAAGGAAGCAGCAAAACTTCTTCATTGCCTCAGAATGTTTGCTGAACTGTGC
ACCTCAGCATCACCAGAATGTCCCCATATATCTCTCTCCAAGTTTTTCACGCTCAACAAT
CTCATTGAACTACCCAGTACTGTTAAAACAAAAGAGCTAACCCCAGATAATTTTGCCACC
AAATTATCTGTTCATGAGAAGGTGAAAGAAGGGAAGATGACATGTTTCTTGAATGGTAAA
GCTACAAGCAAGTCTTTGAAGCCTTCTGTGGAACTTTCTGGGGCTGAAAAGCTAGAGTGG
GCAAAAGGAGACGGTTCCAAAGACATCGTGGAACTAAGAGAGCTTCTGTTAAATGAAATA
CAGTCTTGGTTTCTCAAATTCTTGGAGGGAGCACTTGAAGTTGGGTTCTGGCAGAACAAG
CAGGAACAAAAAACGAAAGTAAGTGTACCACGCCAAACGGAGTCAAAAAATCAAATAGCT
TTCACATTATCACAGCTTAAGCATGCAAATGAATGGTTGGACAAGGTAAGGAGTACCTTA
TGCTCAGACAAAAACAATGTGGCTGATAGAGTTGATAGATTGAAGCAAAAACTCTACACT
TGTTTACTGCTTTACTTGGATTCAGCCGCTTCAGCTCTTGGAAAGCCGACCTCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400039732
PEP Infomation

pacid=37460473 transcript=PGSC0003DMT400058976 locus=PGSC0003DMG400022904 ID=PGSC0003DMT400058976.v4.03 annot-version=v4.03
Sequence

MAALVPGVLIKLLQSMHSNKKVRGEYRSILLQVISIVPALNGSELWPNHGFFVKVSDSSH
STYVTLSKEENELILNNKLQLGQLFYVERMEPGTPVPVLVGVRPLPGRHPFVGNPKDLMQ
MLEPSEVTVRNAQEDVNGSKLNESPELNKADTKNKFVIKEQKTVVASRYMRGVLTSNTKI
GGLDQGTGVKGIENESSGAAKKAVPLKEKQCELKGQTRSSTPFRSQSDAFVINSGINKHM
KTPIFSTLKLTTSKQESIRENSQSSEAYMPWSSLPTNLAKPGKGILRRGLLASLVAAEAQ
EEAKEAAKLLHCLRMFAELCTSASPECPHISLSKFFTLNNLIELPSTVKTKELTPDNFAT
KLSVHEKVKEGKMTCFLNGKATSKSLKPSVELSGAEKLEWAKGDGSKDIVELRELLLNEI
QSWFLKFLEGALEVGFWQNKQEQKTKVSVPRQTESKNQIAFTLSQLKHANEWLDKVRSTL
CSDKNNVADRVDRLKQKLYTCLLLYLDSAASALGKPTS*

Transcript Sequence

Transcript ID

PGSC0003DMT400058976
Transcript Infomation

pacid=37460473 locus=PGSC0003DMG400022904 ID=PGSC0003DMT400058976.v4.03 annot-version=v4.03
Sequence

ATGGCAGCCCTCGTACCAGGAGTACTGATTAAGCTTCTCCAGAGTATGCATTCCAATAAA
AAGGTTCGTGGGGAATATAGATCAATCCTTTTACAAGTCATCAGCATTGTCCCTGCCTTG
AATGGTTCAGAACTATGGCCAAACCATGGTTTCTTTGTTAAAGTTTCGGATTCTTCTCAT
TCGACATATGTTACATTATCCAAAGAGGAGAATGAGCTCATATTGAACAACAAATTGCAA
CTTGGCCAGCTCTTTTATGTTGAAAGAATGGAGCCTGGAACTCCAGTTCCAGTTTTAGTA
GGGGTGAGGCCACTTCCAGGGCGACATCCATTTGTAGGTAACCCGAAGGATTTAATGCAA
ATGTTGGAACCATCTGAAGTCACTGTTCGAAATGCTCAGGAAGATGTAAATGGTTCGAAG
TTGAATGAATCGCCTGAATTGAACAAAGCGGACACTAAGAACAAATTTGTTATCAAAGAG
CAAAAGACGGTTGTTGCTTCCAGGTACATGCGAGGAGTATTAACCTCTAACACAAAGATT
GGAGGGCTTGATCAAGGTACTGGTGTGAAAGGCATTGAGAATGAGAGCAGTGGAGCTGCT
AAAAAGGCCGTACCTCTGAAAGAGAAACAATGCGAGCTTAAAGGTCAGACACGGTCTTCA
ACTCCTTTCCGCAGCCAGTCTGATGCATTTGTGATAAACTCAGGCATAAATAAGCATATG
AAAACTCCAATATTTTCAACATTGAAACTCACAACAAGCAAACAAGAAAGCATCAGAGAA
AACAGTCAATCCTCGGAAGCGTACATGCCCTGGTCCTCGCTACCAACCAACCTTGCAAAG
CCTGGGAAGGGGATACTTAGGAGGGGATTATTAGCTTCTTTAGTAGCAGCAGAAGCTCAA
GAAGAAGCGAAGGAAGCAGCAAAACTTCTTCATTGCCTCAGAATGTTTGCTGAACTGTGC
ACCTCAGCATCACCAGAATGTCCCCATATATCTCTCTCCAAGTTTTTCACGCTCAACAAT
CTCATTGAACTACCCAGTACTGTTAAAACAAAAGAGCTAACCCCAGATAATTTTGCCACC
AAATTATCTGTTCATGAGAAGGTGAAAGAAGGGAAGATGACATGTTTCTTGAATGGTAAA
GCTACAAGCAAGTCTTTGAAGCCTTCTGTGGAACTTTCTGGGGCTGAAAAGCTAGAGTGG
GCAAAAGGAGACGGTTCCAAAGACATCGTGGAACTAAGAGAGCTTCTGTTAAATGAAATA
CAGTCTTGGTTTCTCAAATTCTTGGAGGGAGCACTTGAAGTTGGGTTCTGGCAGAACAAG
CAGGAACAAAAAACGAAAGTAAGTGTACCACGCCAAACGGAGTCAAAAAATCAAATAGCT
TTCACATTATCACAGCTTAAGCATGCAAATGAATGGTTGGACAAGGTAAGGAGTACCTTA
TGCTCAGACAAAAACAATGTGGCTGATAGAGTTGATAGATTGAAGCAAAAACTCTACACT
TGTTTACTGCTTTACTTGGATTCAGCCGCTTCAGCTCTTGGAAAGCCGACCTCATAG