Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058960
CDS Infomation

pacid=37460413 polypeptide=PGSC0003DMP400039724 locus=PGSC0003DMG401022901 ID=PGSC0003DMT400058960.v4.03 annot-version=v4.03
Sequence

ATGGCGGGTGAACCAGTTAATGTGAATGAATTTCAAGAGCTTGCTAGGAAAGTTCTTCCA
AAGATGTACTATGACTTCTTTGCTGGAGGAGCTGAGGATGAGTACACACTCAAAGAAAAT
ATCGAAGCATTTCATAGAATCACTATTCAGCCAAGAATACTAGTTGATGTGAGCAGAATA
GACATGTCAACTGTTATACTCGGTCACAAGACATCAGCTCCAATTATACTTGCCCCTTCT
GCTGCGCATCAATTGGCACATCCTGAAGGAGAAGTTGCAACAGCCAGAGGTGCTGCAGCA
TGTAATGTTATCATGGGACTGTCATTTATGTCTACATGCACAGTGGAGGAGGTTGCTTCA
AGCTGCAATGCTGTTCGCTTCTTTCAAATTTATGTTTACAAAAGGAGAGATGTAACAGAA
TTTATGGTACGTCGAGCTGAGAGCAACGGGTTCAGGGCTATAATTCTCACTGCTGATACT
CCAAGGCTTGGCAGAAGGGAGGCTGATATAAAGAATAAGATGATATCATTTCGGCTGAGG
AATTTTGAAGGTTTTATATCAACTGATGTTGTTTCAGACAAAGGCTCAAATCTTGCAGCA
TATGCTGAAGAAACTCTTGATCCGTCGCTTTGCTGGAAGGATATAGCGTGGCTAAAATCA
ATTACTAAGTTGCCAATTTTGATTAAGGGTGTTCTCAATGGTGAAGATGCAATGAAAGCA
ATTGAAGCAGGAGTTGTAGGAATTATCATCTCTAATCATGGAGCTCGACAACTAGATTAC
TCTCCAGCTACTATTTCTGTTCTTGAAGAGGTGGTCCAAGCTGTTCAAGGTAAAGTTCCA
GTTCTTCTCGATGGAGGAATTAGGCGAGGAACAGATATATTCAAGGCATTAGCACTAGGG
GCAAAAGCTGTTATGATTGGTCGACCAGTTATCTATGGCCTGGCTGCTAAGGGAGAATCT
GGAGTAAAGCAAGTTATTGAAATGCTAAAGAATGAACTTGAGCTGACCATGGCTCTTGCT
GGCTGCTGCACTGTGGATGATATTACGAGAAGCCATGTTAAGACAGAGAAAGAGAAGTTC
CTTTGTAGGATGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400039724
PEP Infomation

pacid=37460413 transcript=PGSC0003DMT400058960 locus=PGSC0003DMG401022901 ID=PGSC0003DMT400058960.v4.03 annot-version=v4.03
Sequence

MAGEPVNVNEFQELARKVLPKMYYDFFAGGAEDEYTLKENIEAFHRITIQPRILVDVSRI
DMSTVILGHKTSAPIILAPSAAHQLAHPEGEVATARGAAACNVIMGLSFMSTCTVEEVAS
SCNAVRFFQIYVYKRRDVTEFMVRRAESNGFRAIILTADTPRLGRREADIKNKMISFRLR
NFEGFISTDVVSDKGSNLAAYAEETLDPSLCWKDIAWLKSITKLPILIKGVLNGEDAMKA
IEAGVVGIIISNHGARQLDYSPATISVLEEVVQAVQGKVPVLLDGGIRRGTDIFKALALG
AKAVMIGRPVIYGLAAKGESGVKQVIEMLKNELELTMALAGCCTVDDITRSHVKTEKEKF
LCRM*

Transcript Sequence

Transcript ID

PGSC0003DMT400058960
Transcript Infomation

pacid=37460413 locus=PGSC0003DMG401022901 ID=PGSC0003DMT400058960.v4.03 annot-version=v4.03
Sequence

ATGGCGGGTGAACCAGTTAATGTGAATGAATTTCAAGAGCTTGCTAGGAAAGTTCTTCCA
AAGATGTACTATGACTTCTTTGCTGGAGGAGCTGAGGATGAGTACACACTCAAAGAAAAT
ATCGAAGCATTTCATAGAATCACTATTCAGCCAAGAATACTAGTTGATGTGAGCAGAATA
GACATGTCAACTGTTATACTCGGTCACAAGACATCAGCTCCAATTATACTTGCCCCTTCT
GCTGCGCATCAATTGGCACATCCTGAAGGAGAAGTTGCAACAGCCAGAGGTGCTGCAGCA
TGTAATGTTATCATGGGACTGTCATTTATGTCTACATGCACAGTGGAGGAGGTTGCTTCA
AGCTGCAATGCTGTTCGCTTCTTTCAAATTTATGTTTACAAAAGGAGAGATGTAACAGAA
TTTATGGTACGTCGAGCTGAGAGCAACGGGTTCAGGGCTATAATTCTCACTGCTGATACT
CCAAGGCTTGGCAGAAGGGAGGCTGATATAAAGAATAAGATGATATCATTTCGGCTGAGG
AATTTTGAAGGTTTTATATCAACTGATGTTGTTTCAGACAAAGGCTCAAATCTTGCAGCA
TATGCTGAAGAAACTCTTGATCCGTCGCTTTGCTGGAAGGATATAGCGTGGCTAAAATCA
ATTACTAAGTTGCCAATTTTGATTAAGGGTGTTCTCAATGGTGAAGATGCAATGAAAGCA
ATTGAAGCAGGAGTTGTAGGAATTATCATCTCTAATCATGGAGCTCGACAACTAGATTAC
TCTCCAGCTACTATTTCTGTTCTTGAAGAGGTGGTCCAAGCTGTTCAAGGTAAAGTTCCA
GTTCTTCTCGATGGAGGAATTAGGCGAGGAACAGATATATTCAAGGCATTAGCACTAGGG
GCAAAAGCTGTTATGATTGGTCGACCAGTTATCTATGGCCTGGCTGCTAAGGGAGAATCT
GGAGTAAAGCAAGTTATTGAAATGCTAAAGAATGAACTTGAGCTGACCATGGCTCTTGCT
GGCTGCTGCACTGTGGATGATATTACGAGAAGCCATGTTAAGACAGAGAAAGAGAAGTTC
CTTTGTAGGATGTAA