Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058948
CDS Infomation

pacid=37462872 polypeptide=PGSC0003DMP400039714 locus=PGSC0003DMG400022900 ID=PGSC0003DMT400058948.v4.03 annot-version=v4.03
Sequence

ATGGACATTTTTCGTGTTATGATCAAAACATGCCTTCTTTGCATCGTCTTCTTGATCAAT
TACCCCGTGAAAATAATTTCAGTTTCCGATACTGATGCTTTGTTGAAGCTGAAACAATCA
TTTACAAATGCAGCGTCATTGGAATCCTGGAAACCTGGAACGGATCCGTGTGACAAAAAT
ATACGTTGGTTGGGTGTTTTTTGTCAGAAAAAAATGGTTACTGGACTTCTTCTTGCAGAA
ACGAATTTATCTGGAATTATAGACGTTGAGGCATTATCACAAATGCCTGCTCTGCGTACA
CTTAGTTTTCAAAGCAATTTATTTTCTGGACCAATTCCGGAATTCAATCGAATGGGTGCT
TTAAAAGGTCTTTATTTGTCGGAAAATCAATTTTCTGGTGAAATTCCATCAAATTACTTC
GAAAAAATGTTGTCGTTGAAGAAGTTATGGCTCTCCGACAACAAATTTTCGGGTGAAATT
CCGTCTTCATTAATGGAGCTGCAATATCTCATTGAATTGCACCTGGAGAACAATCAGTTC
ACAGGTCCAATACCGCCAATCTCGAAGCAGTCAACATTAGAATCAATCGATCTTTCTAAT
AATAACTTGAAAGGGGAAATCCCTGTTTCGTTATCAAGATTCAATGAGAGTTCGTTTAAG
GGGAATTCCGAGCTTTGTGGTGAAAAATTAGGCAAAGCTTGTAATCCAACCATAAATAGC
AGCAACGACAACAACACTAATAATAACGCAAATAATGGCACTCAACAAAGTCCGGATAGT
AATTCGAATAAAAGCATCTCAATGTGGATTATGATATCATCAGTTGTTCTTTTATTGATC
ATGATCATAGTAATATATCTCATATGTCGCTACCAACAAAATCGCCGTGCTTCAATTGAA
AGTTTTGATGAGCCATCACTTGGGAGGCGAATTTCGAGTGATAGCAAGAAGTCATTTGAA
CTAAGTAGACGTGGCAGTTCGATTAGAAAAGGATCGATAATGGGAAAACGTGTAGGAGAT
TTGACAATGGTGAATGATGATAAAGGTGAGTTTGGTTTAGCAGATTTGATGAAAGCTGCT
GCAGAGGTGTTAGGGAATGGGCCATTGGGTTCTTCTTATAAGGCTATGATGTCAAATGGA
TTGACAGTTGTGGTAAAGAGGATCAAAGAAATGAACAAGATCGGAAAAGATGGTTTCGAT
GCAGAGGTTAAACGTTTAGGAAGATTGAGACATAAAAATATTCTAACACTTTTGGCTTAC
CATCATCGCAAGGAAGAGAAGTTGTTTGTGTATGAGTACATTCCCAAAGGAAGCTTGCTG
TACATATTGCACGGTGAAAGAGGGCTGCCCCATGCTGAGCTCACCTGGCCAGTGCGTCTA
AATATTATACAAGGAGTAGCTGAAGGACTAAATTATCTTCACACTGAACTTGCTTCTTCT
GATTTGCCCCATGGCGATTTGAAATCGAGCAATATACTCATAAGCACAAACCACGAGCCA
ATACTCACAGGTTACGGATTCTGCACCTTAATGAACAACGCGCATGCAGTTCAAGCACTA
ATCGCGTTCAAGTCACCAGAAGCAGTACAAAATAACCAAGTTACACCCAAATGCGATGTT
TATTGCCTTGGAATTGTGATTCTTGAGATAATAACAGGGAAGTACCCGTCTATATATCTT
AATACCGGTAAAGGAGGGATAGACATAGCACAATGGGCGAAATCCGCGATTGCTGAGGGA
AGAGAAACTGAATTATGTGATCCAGATATAATAGCAAGCGCGAAAGATTCAATGAGTTCA
ATTAAGGAACTAATTCACATTAGTGCAGCATGTGTAGAGAGTAATCCACAACAGAGGATA
AATATTAGAGAAGTCATTAGAAGAATTGAAGAAATACAACAACAAAACGGAGTAGGCCAA
ACAGGACAAACAACAACAACAACGCCTCAGTCTCAAACGGGACAAGCAATTGAGATAATG
CAGTCTCCAAGAGATGGAGATGCTGAAATACAAGTGTCGGAATCCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400039714
PEP Infomation

pacid=37462872 transcript=PGSC0003DMT400058948 locus=PGSC0003DMG400022900 ID=PGSC0003DMT400058948.v4.03 annot-version=v4.03
Sequence

MDIFRVMIKTCLLCIVFLINYPVKIISVSDTDALLKLKQSFTNAASLESWKPGTDPCDKN
IRWLGVFCQKKMVTGLLLAETNLSGIIDVEALSQMPALRTLSFQSNLFSGPIPEFNRMGA
LKGLYLSENQFSGEIPSNYFEKMLSLKKLWLSDNKFSGEIPSSLMELQYLIELHLENNQF
TGPIPPISKQSTLESIDLSNNNLKGEIPVSLSRFNESSFKGNSELCGEKLGKACNPTINS
SNDNNTNNNANNGTQQSPDSNSNKSISMWIMISSVVLLLIMIIVIYLICRYQQNRRASIE
SFDEPSLGRRISSDSKKSFELSRRGSSIRKGSIMGKRVGDLTMVNDDKGEFGLADLMKAA
AEVLGNGPLGSSYKAMMSNGLTVVVKRIKEMNKIGKDGFDAEVKRLGRLRHKNILTLLAY
HHRKEEKLFVYEYIPKGSLLYILHGERGLPHAELTWPVRLNIIQGVAEGLNYLHTELASS
DLPHGDLKSSNILISTNHEPILTGYGFCTLMNNAHAVQALIAFKSPEAVQNNQVTPKCDV
YCLGIVILEIITGKYPSIYLNTGKGGIDIAQWAKSAIAEGRETELCDPDIIASAKDSMSS
IKELIHISAACVESNPQQRINIREVIRRIEEIQQQNGVGQTGQTTTTTPQSQTGQAIEIM
QSPRDGDAEIQVSES*

Transcript Sequence

Transcript ID

PGSC0003DMT400058948
Transcript Infomation

pacid=37462872 locus=PGSC0003DMG400022900 ID=PGSC0003DMT400058948.v4.03 annot-version=v4.03
Sequence

ATGGACATTTTTCGTGTTATGATCAAAACATGCCTTCTTTGCATCGTCTTCTTGATCAAT
TACCCCGTGAAAATAATTTCAGTTTCCGATACTGATGCTTTGTTGAAGCTGAAACAATCA
TTTACAAATGCAGCGTCATTGGAATCCTGGAAACCTGGAACGGATCCGTGTGACAAAAAT
ATACGTTGGTTGGGTGTTTTTTGTCAGAAAAAAATGGTTACTGGACTTCTTCTTGCAGAA
ACGAATTTATCTGGAATTATAGACGTTGAGGCATTATCACAAATGCCTGCTCTGCGTACA
CTTAGTTTTCAAAGCAATTTATTTTCTGGACCAATTCCGGAATTCAATCGAATGGGTGCT
TTAAAAGGTCTTTATTTGTCGGAAAATCAATTTTCTGGTGAAATTCCATCAAATTACTTC
GAAAAAATGTTGTCGTTGAAGAAGTTATGGCTCTCCGACAACAAATTTTCGGGTGAAATT
CCGTCTTCATTAATGGAGCTGCAATATCTCATTGAATTGCACCTGGAGAACAATCAGTTC
ACAGGTCCAATACCGCCAATCTCGAAGCAGTCAACATTAGAATCAATCGATCTTTCTAAT
AATAACTTGAAAGGGGAAATCCCTGTTTCGTTATCAAGATTCAATGAGAGTTCGTTTAAG
GGGAATTCCGAGCTTTGTGGTGAAAAATTAGGCAAAGCTTGTAATCCAACCATAAATAGC
AGCAACGACAACAACACTAATAATAACGCAAATAATGGCACTCAACAAAGTCCGGATAGT
AATTCGAATAAAAGCATCTCAATGTGGATTATGATATCATCAGTTGTTCTTTTATTGATC
ATGATCATAGTAATATATCTCATATGTCGCTACCAACAAAATCGCCGTGCTTCAATTGAA
AGTTTTGATGAGCCATCACTTGGGAGGCGAATTTCGAGTGATAGCAAGAAGTCATTTGAA
CTAAGTAGACGTGGCAGTTCGATTAGAAAAGGATCGATAATGGGAAAACGTGTAGGAGAT
TTGACAATGGTGAATGATGATAAAGGTGAGTTTGGTTTAGCAGATTTGATGAAAGCTGCT
GCAGAGGTGTTAGGGAATGGGCCATTGGGTTCTTCTTATAAGGCTATGATGTCAAATGGA
TTGACAGTTGTGGTAAAGAGGATCAAAGAAATGAACAAGATCGGAAAAGATGGTTTCGAT
GCAGAGGTTAAACGTTTAGGAAGATTGAGACATAAAAATATTCTAACACTTTTGGCTTAC
CATCATCGCAAGGAAGAGAAGTTGTTTGTGTATGAGTACATTCCCAAAGGAAGCTTGCTG
TACATATTGCACGGTGAAAGAGGGCTGCCCCATGCTGAGCTCACCTGGCCAGTGCGTCTA
AATATTATACAAGGAGTAGCTGAAGGACTAAATTATCTTCACACTGAACTTGCTTCTTCT
GATTTGCCCCATGGCGATTTGAAATCGAGCAATATACTCATAAGCACAAACCACGAGCCA
ATACTCACAGGTTACGGATTCTGCACCTTAATGAACAACGCGCATGCAGTTCAAGCACTA
ATCGCGTTCAAGTCACCAGAAGCAGTACAAAATAACCAAGTTACACCCAAATGCGATGTT
TATTGCCTTGGAATTGTGATTCTTGAGATAATAACAGGGAAGTACCCGTCTATATATCTT
AATACCGGTAAAGGAGGGATAGACATAGCACAATGGGCGAAATCCGCGATTGCTGAGGGA
AGAGAAACTGAATTATGTGATCCAGATATAATAGCAAGCGCGAAAGATTCAATGAGTTCA
ATTAAGGAACTAATTCACATTAGTGCAGCATGTGTAGAGAGTAATCCACAACAGAGGATA
AATATTAGAGAAGTCATTAGAAGAATTGAAGAAATACAACAACAAAACGGAGTAGGCCAA
ACAGGACAAACAACAACAACAACGCCTCAGTCTCAAACGGGACAAGCAATTGAGATAATG
CAGTCTCCAAGAGATGGAGATGCTGAAATACAAGTGTCGGAATCCTAA