Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058947
CDS Infomation

pacid=37459348 polypeptide=PGSC0003DMP400039713 locus=PGSC0003DMG400022899 ID=PGSC0003DMT400058947.v4.03 annot-version=v4.03
Sequence

ATGGAAGCACCAGAGAACGACGCCGTAGCGTTCGAGTCAGCTGAGAAGATAATTCTCCGG
TGGGATTCTACGGTGTCGGAAGAAGCTAGAGAGAAAATGATATTTGACGGCGATCGTTAC
GAGATCAATCGGTATTTGCACGCCGTCGATGAAATCCAACGGTCAATGGAGTCCACAACA
CTCTCCGACGACCAAGATAAAGCTAATAGTGCGATCCAGATCGCCATGGCTCGGCTTGAG
GATGAGTTTCGCAGCATACTTGTTGCTCACACAAATGCAATCGAGGCTGATTCGTTAACT
GACCCTAGTCCTTCTCCAGTCCACTCCGGCGAATTCCAGGTGCCTGAAGAAGACTACCAT
GATACTCCTACTGACGATGATTCGTTCACCAAAGATTTGGAACATCAAGAGAGTAGCAGC
AGCAGCTATCGATCTACTAGCAGCATCCGCGAAGTTGATCTCATGCCGCCCGTAGCAATA
TATGATCTCCGGAGTATCGCCGAGCGAATGATTTCCGCTGGATATCTCCGGGAGTGTATT
CAGGTCTACGGTAGTGTACGGAAGTCCGCTGTGGAGTCGAGCTTCCGCAAGCTTGGAATA
GAGAAACTCAGCATCGGAGATATCCAGAGACTTGATTGGGAGACTTTGGAAACAAAGATC
CGAAGATGGATACGAGCTGCCAAAGTATGCGTTCGTATACTCTTCGCTAGCGAGAAGAAA
CTCTGTGAGCAAATCTTCGAGAGTTTGGGCACGGCGACTGATGATGCTTGCTTTATGGAG
ACTATTAAAGGACCAGCTATACAGCTGTTCAATTTCGCTGAAGCCATTAGCATTAGCCGG
CGATCGCCTGAGAAGTTGTTTAAGATATTGGATCTTCATGACGCTTTATCCGATTTACTG
CCTGATGTTGAAATTGTTTTCGAGTCAAAATCTTCAGAATCAATTAGAGTTCAAGCAGTA
GAGATATTGTCTAGGTTAGGGGAGGCTGCTAGAGGGATACTGTCGGAATTTGAGAATGCT
GTACTCCGTGAACCTTCGAAGGTCCCCGTTCCAGGAGGGACAATTCATCCCTTAACTAGG
TATGTGATGAACTATATAAGTCTAATTTCGGACTATAAGAAGACAATGGGTGAATTGATT
GTTTCACAGCCATCGACGGGATCAAGGTATTCAAGTGATCCTAACACCCCTGATATGGAC
TTTGCGGACCTAGAAGGGCTGACACCATTAGCGCTTCATTTGATTTGGATTATTGTCATT
TTGCAGTTCAATTTGGAAGGTAAGTCTAAGCACTATAGAGATACCTCTTTGGCTCATTTA
TTCATGATGAACAATGTCCATTATATTGTTCATAAGACTAAAGGGTCACCTGAGTTGGGG
GAAATGATTGTAGATGATTTCTTGAGAAAATTAACGGGGAAATTTAGACAAGCTGCTACC
AGTTACCAGAGAGCAACCTGGGTGAGGGTTTTGCATTGTTTGAGAGATGAGGGACTACAT
GTGAGTGGCAGTTTTTCATCGGGTGTGTCCAAGAGTGCATTGAGAGAGCGTTTCAAGACG
TTCAACGCCTTGTTTGAAGAAGTGCACAGGACTCAGTCCACATGGTTGATACCAGATACA
CAGCTCAGGGAGGAGCTGCGCATTTCCATAGCCGAAAAGTTGATTCCTGCCTATAGATCA
TTTCTTGGACGGTTCAGGAGCCATATAGAAAGCGGAAGGCATCCAGAAAACTATATCAAG
TATACTGTGGAGGACCTAGAGAATGCTGTCTTAGATTTCTTTGAGGGGTACGCTGTGTCA
CAGCACTTGAGAAGAAGATCTCAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400039713
PEP Infomation

pacid=37459348 transcript=PGSC0003DMT400058947 locus=PGSC0003DMG400022899 ID=PGSC0003DMT400058947.v4.03 annot-version=v4.03
Sequence

MEAPENDAVAFESAEKIILRWDSTVSEEAREKMIFDGDRYEINRYLHAVDEIQRSMESTT
LSDDQDKANSAIQIAMARLEDEFRSILVAHTNAIEADSLTDPSPSPVHSGEFQVPEEDYH
DTPTDDDSFTKDLEHQESSSSSYRSTSSIREVDLMPPVAIYDLRSIAERMISAGYLRECI
QVYGSVRKSAVESSFRKLGIEKLSIGDIQRLDWETLETKIRRWIRAAKVCVRILFASEKK
LCEQIFESLGTATDDACFMETIKGPAIQLFNFAEAISISRRSPEKLFKILDLHDALSDLL
PDVEIVFESKSSESIRVQAVEILSRLGEAARGILSEFENAVLREPSKVPVPGGTIHPLTR
YVMNYISLISDYKKTMGELIVSQPSTGSRYSSDPNTPDMDFADLEGLTPLALHLIWIIVI
LQFNLEGKSKHYRDTSLAHLFMMNNVHYIVHKTKGSPELGEMIVDDFLRKLTGKFRQAAT
SYQRATWVRVLHCLRDEGLHVSGSFSSGVSKSALRERFKTFNALFEEVHRTQSTWLIPDT
QLREELRISIAEKLIPAYRSFLGRFRSHIESGRHPENYIKYTVEDLENAVLDFFEGYAVS
QHLRRRSQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400058947
Transcript Infomation

pacid=37459348 locus=PGSC0003DMG400022899 ID=PGSC0003DMT400058947.v4.03 annot-version=v4.03
Sequence

ATGGAAGCACCAGAGAACGACGCCGTAGCGTTCGAGTCAGCTGAGAAGATAATTCTCCGG
TGGGATTCTACGGTGTCGGAAGAAGCTAGAGAGAAAATGATATTTGACGGCGATCGTTAC
GAGATCAATCGGTATTTGCACGCCGTCGATGAAATCCAACGGTCAATGGAGTCCACAACA
CTCTCCGACGACCAAGATAAAGCTAATAGTGCGATCCAGATCGCCATGGCTCGGCTTGAG
GATGAGTTTCGCAGCATACTTGTTGCTCACACAAATGCAATCGAGGCTGATTCGTTAACT
GACCCTAGTCCTTCTCCAGTCCACTCCGGCGAATTCCAGGTGCCTGAAGAAGACTACCAT
GATACTCCTACTGACGATGATTCGTTCACCAAAGATTTGGAACATCAAGAGAGTAGCAGC
AGCAGCTATCGATCTACTAGCAGCATCCGCGAAGTTGATCTCATGCCGCCCGTAGCAATA
TATGATCTCCGGAGTATCGCCGAGCGAATGATTTCCGCTGGATATCTCCGGGAGTGTATT
CAGGTCTACGGTAGTGTACGGAAGTCCGCTGTGGAGTCGAGCTTCCGCAAGCTTGGAATA
GAGAAACTCAGCATCGGAGATATCCAGAGACTTGATTGGGAGACTTTGGAAACAAAGATC
CGAAGATGGATACGAGCTGCCAAAGTATGCGTTCGTATACTCTTCGCTAGCGAGAAGAAA
CTCTGTGAGCAAATCTTCGAGAGTTTGGGCACGGCGACTGATGATGCTTGCTTTATGGAG
ACTATTAAAGGACCAGCTATACAGCTGTTCAATTTCGCTGAAGCCATTAGCATTAGCCGG
CGATCGCCTGAGAAGTTGTTTAAGATATTGGATCTTCATGACGCTTTATCCGATTTACTG
CCTGATGTTGAAATTGTTTTCGAGTCAAAATCTTCAGAATCAATTAGAGTTCAAGCAGTA
GAGATATTGTCTAGGTTAGGGGAGGCTGCTAGAGGGATACTGTCGGAATTTGAGAATGCT
GTACTCCGTGAACCTTCGAAGGTCCCCGTTCCAGGAGGGACAATTCATCCCTTAACTAGG
TATGTGATGAACTATATAAGTCTAATTTCGGACTATAAGAAGACAATGGGTGAATTGATT
GTTTCACAGCCATCGACGGGATCAAGGTATTCAAGTGATCCTAACACCCCTGATATGGAC
TTTGCGGACCTAGAAGGGCTGACACCATTAGCGCTTCATTTGATTTGGATTATTGTCATT
TTGCAGTTCAATTTGGAAGGTAAGTCTAAGCACTATAGAGATACCTCTTTGGCTCATTTA
TTCATGATGAACAATGTCCATTATATTGTTCATAAGACTAAAGGGTCACCTGAGTTGGGG
GAAATGATTGTAGATGATTTCTTGAGAAAATTAACGGGGAAATTTAGACAAGCTGCTACC
AGTTACCAGAGAGCAACCTGGGTGAGGGTTTTGCATTGTTTGAGAGATGAGGGACTACAT
GTGAGTGGCAGTTTTTCATCGGGTGTGTCCAAGAGTGCATTGAGAGAGCGTTTCAAGACG
TTCAACGCCTTGTTTGAAGAAGTGCACAGGACTCAGTCCACATGGTTGATACCAGATACA
CAGCTCAGGGAGGAGCTGCGCATTTCCATAGCCGAAAAGTTGATTCCTGCCTATAGATCA
TTTCTTGGACGGTTCAGGAGCCATATAGAAAGCGGAAGGCATCCAGAAAACTATATCAAG
TATACTGTGGAGGACCTAGAGAATGCTGTCTTAGATTTCTTTGAGGGGTACGCTGTGTCA
CAGCACTTGAGAAGAAGATCTCAGTGA