Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058945
CDS Infomation

pacid=37462623 polypeptide=PGSC0003DMP400039711 locus=PGSC0003DMG400022898 ID=PGSC0003DMT400058945.v4.03 annot-version=v4.03
Sequence

ATGGCGACGGCAACTATCGCCACTGCAGCAGGTGCTGCTGCGCTATTGTATTATACGTTA
AATAAGAAGTTGCAATCTTCTCCAACAACGGATGACGATGACGATGAATGTGGCAGTAGT
GGCCAAGATCATGCTCTACTAGGAGTTAATAGGGTTTCCAATAGACTTATACAGGCCCCT
GCTACATGGTTGGAGACAATTGCAACATTGTCCGAGACTCTTAGGTTTACTTACTCGGAG
ACCCTGGGCAAGTGGCCTATTGGGGATTTGGCTTTTGGCATCAGTTTTCTTTTGAAGCAG
CAGGGAAACATACATGTTAGTAGCATATTCTGTGTCGAAGACAGTGCCCAGTTAAAAGGT
TCTGATATTGCTGCAGAGCTTAAATGCCTCTTGCACTTGTTGACAGTTTGTTGGCATTTC
TCCAAAAAACCTTTCCCATTATTCTTGGAGGAGACAGGCTATTCCCAAGAAAGTGTACTA
CTACAAGAACCCAAAGCTGGAATTCTGAAGCCAGCTTTTACAATAATCGCAGATCACCGA
TCAAGATCTTTCCTCCTTGTAATACGTGGAACTCATAGTATTAAAGATACTTTGACAGCT
GCTACTGGTGCAGTTGTGCCTTTCCATCACACTATGGTACATGAGGGAGGAGTTAGCAAT
TTGGTGTTAGGCTATGCACATTGTGGAATGGTGGCGGCTGCTCGATGGATTGCAAAACTT
GCAACGCCTTGTCTTCTTAAAGCTCTTAGCATTTATCCTGAATACAAACTTAAGATTGTG
GGACACTCCTTGGGTGGAGGAACTGCAGCTATTTTAACTTATGTACTTCGTGAGCAGAAG
GAACTGTCAACAGCTACCTGTGTAGCATTTGCTCCAGCTGCCTGTATGACATGGGAATTA
GCTGAATCGGGGTGTGAATTTATTACCTCAGTAATCAATGGAGCTGATTTGGTCCCTACA
TTTTCAGCTGCTTCAGTGGACGATTTGCGTTCTGAGGTGACAACATCTGCTTGGTTGAAC
GATCTAAGAAATCAGATTGAGCATACTAGGATTCTTAGTACTGTTTATCGTTCTGCATCA
GCCCTGGGGTCTCGTCTTCCATCTATCGCCACTGCTAAAGCTAAGGTTGCAGGTGCTGGT
GCAATACTGCGGCCTGTTTCCAGTGGTACACAGGTTGTCATGAAGAGAGCGCAAAGTATG
GCCCAGGCAGCATTGTCACGACCTGCCATGCAACTGTCATCATGGTCATGCATGGGTCCA
AGACGTCGATCCACAGCTATTCAGGTTAATTCTGAAGAACGGCAAATCTCCTGTGGAACT
TCTTCCGGCGAAAATTCTGAAACATTCATTGTGGAATCCGAGGAGACAAGAAGTTCGACT
GTGATGGAACTTCCTGTATCTTCAACCGAGGGAGTCACGTGGAACTCGGAAATTGATCAA
TCTTTTGCAGATGGGATTAATATCCATAATAGCCTGGATCCCGATCTTGATGATAGTGAA
CATGGACCTGAAGACCGAATGACAGAAGTTGAGATGTGGCAACAACTAGAGCATGAACTG
TATGATCAGTCTGAAGGGGAAACTGATGTCGCGAAGGAGATTAGGGAAGAAGAAGCAGCA
GCCATTGCAGAGTCAGGTCAGAGCTCAAGTGAAAGCTCTGTTCCAAACACAAAGGAGGTG
CACAGATTCTTTCCTCCTGGAAAGATAATGCATATAGTTACTCTCCTCTCTGAGGAAGTC
GATCATGAAAGTGACAGCGATACATTGAGTGAGGACCATAACCAACCCAAGGATACAAAG
GTTGGTATCTTTCTCACTCCGAGATCATTGTACAGTAAAATAAGGCTGTCACAAACTATG
ATCAGTGATCATTTCATGCCGGTTTATAGAAGGCAGATAGAGAAACTAATTAGGGATCTT
GAGAACAACGATGCTTGTGACAAATCAATGGAATCTGAGGTTCAGTGTCAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400039711
PEP Infomation

pacid=37462623 transcript=PGSC0003DMT400058945 locus=PGSC0003DMG400022898 ID=PGSC0003DMT400058945.v4.03 annot-version=v4.03
Sequence

MATATIATAAGAAALLYYTLNKKLQSSPTTDDDDDECGSSGQDHALLGVNRVSNRLIQAP
ATWLETIATLSETLRFTYSETLGKWPIGDLAFGISFLLKQQGNIHVSSIFCVEDSAQLKG
SDIAAELKCLLHLLTVCWHFSKKPFPLFLEETGYSQESVLLQEPKAGILKPAFTIIADHR
SRSFLLVIRGTHSIKDTLTAATGAVVPFHHTMVHEGGVSNLVLGYAHCGMVAAARWIAKL
ATPCLLKALSIYPEYKLKIVGHSLGGGTAAILTYVLREQKELSTATCVAFAPAACMTWEL
AESGCEFITSVINGADLVPTFSAASVDDLRSEVTTSAWLNDLRNQIEHTRILSTVYRSAS
ALGSRLPSIATAKAKVAGAGAILRPVSSGTQVVMKRAQSMAQAALSRPAMQLSSWSCMGP
RRRSTAIQVNSEERQISCGTSSGENSETFIVESEETRSSTVMELPVSSTEGVTWNSEIDQ
SFADGINIHNSLDPDLDDSEHGPEDRMTEVEMWQQLEHELYDQSEGETDVAKEIREEEAA
AIAESGQSSSESSVPNTKEVHRFFPPGKIMHIVTLLSEEVDHESDSDTLSEDHNQPKDTK
VGIFLTPRSLYSKIRLSQTMISDHFMPVYRRQIEKLIRDLENNDACDKSMESEVQCQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400058945
Transcript Infomation

pacid=37462623 locus=PGSC0003DMG400022898 ID=PGSC0003DMT400058945.v4.03 annot-version=v4.03
Sequence

ATGGCGACGGCAACTATCGCCACTGCAGCAGGTGCTGCTGCGCTATTGTATTATACGTTA
AATAAGAAGTTGCAATCTTCTCCAACAACGGATGACGATGACGATGAATGTGGCAGTAGT
GGCCAAGATCATGCTCTACTAGGAGTTAATAGGGTTTCCAATAGACTTATACAGGCCCCT
GCTACATGGTTGGAGACAATTGCAACATTGTCCGAGACTCTTAGGTTTACTTACTCGGAG
ACCCTGGGCAAGTGGCCTATTGGGGATTTGGCTTTTGGCATCAGTTTTCTTTTGAAGCAG
CAGGGAAACATACATGTTAGTAGCATATTCTGTGTCGAAGACAGTGCCCAGTTAAAAGGT
TCTGATATTGCTGCAGAGCTTAAATGCCTCTTGCACTTGTTGACAGTTTGTTGGCATTTC
TCCAAAAAACCTTTCCCATTATTCTTGGAGGAGACAGGCTATTCCCAAGAAAGTGTACTA
CTACAAGAACCCAAAGCTGGAATTCTGAAGCCAGCTTTTACAATAATCGCAGATCACCGA
TCAAGATCTTTCCTCCTTGTAATACGTGGAACTCATAGTATTAAAGATACTTTGACAGCT
GCTACTGGTGCAGTTGTGCCTTTCCATCACACTATGGTACATGAGGGAGGAGTTAGCAAT
TTGGTGTTAGGCTATGCACATTGTGGAATGGTGGCGGCTGCTCGATGGATTGCAAAACTT
GCAACGCCTTGTCTTCTTAAAGCTCTTAGCATTTATCCTGAATACAAACTTAAGATTGTG
GGACACTCCTTGGGTGGAGGAACTGCAGCTATTTTAACTTATGTACTTCGTGAGCAGAAG
GAACTGTCAACAGCTACCTGTGTAGCATTTGCTCCAGCTGCCTGTATGACATGGGAATTA
GCTGAATCGGGGTGTGAATTTATTACCTCAGTAATCAATGGAGCTGATTTGGTCCCTACA
TTTTCAGCTGCTTCAGTGGACGATTTGCGTTCTGAGGTGACAACATCTGCTTGGTTGAAC
GATCTAAGAAATCAGATTGAGCATACTAGGATTCTTAGTACTGTTTATCGTTCTGCATCA
GCCCTGGGGTCTCGTCTTCCATCTATCGCCACTGCTAAAGCTAAGGTTGCAGGTGCTGGT
GCAATACTGCGGCCTGTTTCCAGTGGTACACAGGTTGTCATGAAGAGAGCGCAAAGTATG
GCCCAGGCAGCATTGTCACGACCTGCCATGCAACTGTCATCATGGTCATGCATGGGTCCA
AGACGTCGATCCACAGCTATTCAGGTTAATTCTGAAGAACGGCAAATCTCCTGTGGAACT
TCTTCCGGCGAAAATTCTGAAACATTCATTGTGGAATCCGAGGAGACAAGAAGTTCGACT
GTGATGGAACTTCCTGTATCTTCAACCGAGGGAGTCACGTGGAACTCGGAAATTGATCAA
TCTTTTGCAGATGGGATTAATATCCATAATAGCCTGGATCCCGATCTTGATGATAGTGAA
CATGGACCTGAAGACCGAATGACAGAAGTTGAGATGTGGCAACAACTAGAGCATGAACTG
TATGATCAGTCTGAAGGGGAAACTGATGTCGCGAAGGAGATTAGGGAAGAAGAAGCAGCA
GCCATTGCAGAGTCAGGTCAGAGCTCAAGTGAAAGCTCTGTTCCAAACACAAAGGAGGTG
CACAGATTCTTTCCTCCTGGAAAGATAATGCATATAGTTACTCTCCTCTCTGAGGAAGTC
GATCATGAAAGTGACAGCGATACATTGAGTGAGGACCATAACCAACCCAAGGATACAAAG
GTTGGTATCTTTCTCACTCCGAGATCATTGTACAGTAAAATAAGGCTGTCACAAACTATG
ATCAGTGATCATTTCATGCCGGTTTATAGAAGGCAGATAGAGAAACTAATTAGGGATCTT
GAGAACAACGATGCTTGTGACAAATCAATGGAATCTGAGGTTCAGTGTCAGTGA