Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058923
CDS Infomation

pacid=37462264 polypeptide=PGSC0003DMP400039694 locus=PGSC0003DMG400022891 ID=PGSC0003DMT400058923.v4.03 annot-version=v4.03
Sequence

ATGGTGGCTTCTTCTGTGGCCTCTCCACTATGTACATGGCTCGTAGCAGCTTGCATGTCT
GTATCCAGCGAAAAGGATCAATTTTGGAAGCCTGCTTCTAATTTTCAGTCTTCCAAGTTG
ATGGGTAGGTCTGGTAGGAGAAGAAAAGCGATTACCAAGTGCAACAGTGGGAGCTTGATG
AATGGTTCTGTAATGAACAGTTCTTGGCATACTTGTTTTGGTTTTGAGCCCTGTGAGGAG
TATTATAAATCCGAGGGATTGTCTGCTTCTTTTTCGTCTTTATTTGCCGAAAATGCGTTT
TCTGTATTTGGGTTTAAGCAGGTGCCATTGAATCGAAGGCAGAGGAGAATGAGTTCTGCT
GCTCATTCTGGCAAACCCGTGGCTGTGGCCGTGCAACCTGCAATGGAAGCCACGGCAAAG
AAGAAACCTCTTATGAGGAACAGAAGAGTTGTTGTGACCGGGGTCGGTGTAGTATCACCA
ATCGGTCATGATCCAGACATGTTTTACAATAATCTTCTTGAAGGCATCAGCGGTATAAGT
CAGATTGAGGCTTTCGACTGTTCTGAATTTCCCAGTAGAATTGCTGGGGAAATCAAGGAA
TTTTCGACTAATGGGTGGGTTGCACCCAAACTTTCGAAAAGAGCAGATAAATTCATGCTC
TATATGCTTACTGCTGGAAAGAAAGCTTTGGCAGATGGTGGGATCACAGAAGATTTATTG
CAGGAATTAGATAAGGCTAGATGTGGGGTCCTAATTGGCTCAGCCCTTGGAGGGATGAAG
GTCTTCTATGATGGCATTGAGGCTTTACAGGTGTCGTACAAGAAGCTGAATCCTTTCTGT
GTACCTTTTTCAACATCCAATATGGGAGCTGCCATGCTTGCAATAGATTTGGGTTGGATG
GGTCCAAGCTACTCAATCTCCACTGCATGTGCAACAAGTAACTTCTGTATATTAAGTGCT
GCAAATCATATAATTAGAGGTGAAACAGATATGATGCTTTGTGGGGGGTCAGATTCGGCA
ATTATTCCTATAGGCTTGGGAGGTTTCACTGCTTGTGGAGTCCTGTCACAGAGGAATAGT
GATCCAACAAGGGCTTCACGTCCTTGGGATATGGACCGTGATGGATTTGTGATTGGGGAA
GGATCGGGCGTCTTACTTTTAGAAGAACTTGAACATGCAAAGAAGAGAAAGGCTAAAATA
TATGCCGAGTTTTTGGGTGGAAGCTTCACTTCTGATGCTTATCACATGATAGAGCCACAT
CCAGAAGGAAGTGGAGTTGTTCTCTGCATAGAAAAGGCCTTGGCTCAATCTGGGGTGAAA
CGTGAAGATGTCAACTATATCAATGCTCATGCTGCATCAACCCCAGCCGGTGACCTGAAC
GAATATCAGGCCATTCTGCATTGTTTTGGGAAGAACCCTGAACTTAAAATTAATTCAACA
AAGTCCATGACTGGTCATCTCCTTGGGGCTGCTGGTGCTGTGGAAGCCATCGCAACAGTC
AAGGCCATACATACAGGATGGATCCATCCAAACATCAATCTTGAGAACCCTGACAATGGC
TTGGATATGAATGTGCTGGTGGGCTCTAAGAAGGAGCGCTTGGATATCAAGGTTGCACTC
TCCAACTCATTTGGCTTTGGAGGACACAACTCATCTATTCTATTTGCTCCTTATAAGAAT
GTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400039694
PEP Infomation

pacid=37462264 transcript=PGSC0003DMT400058923 locus=PGSC0003DMG400022891 ID=PGSC0003DMT400058923.v4.03 annot-version=v4.03
Sequence

MVASSVASPLCTWLVAACMSVSSEKDQFWKPASNFQSSKLMGRSGRRRKAITKCNSGSLM
NGSVMNSSWHTCFGFEPCEEYYKSEGLSASFSSLFAENAFSVFGFKQVPLNRRQRRMSSA
AHSGKPVAVAVQPAMEATAKKKPLMRNRRVVVTGVGVVSPIGHDPDMFYNNLLEGISGIS
QIEAFDCSEFPSRIAGEIKEFSTNGWVAPKLSKRADKFMLYMLTAGKKALADGGITEDLL
QELDKARCGVLIGSALGGMKVFYDGIEALQVSYKKLNPFCVPFSTSNMGAAMLAIDLGWM
GPSYSISTACATSNFCILSAANHIIRGETDMMLCGGSDSAIIPIGLGGFTACGVLSQRNS
DPTRASRPWDMDRDGFVIGEGSGVLLLEELEHAKKRKAKIYAEFLGGSFTSDAYHMIEPH
PEGSGVVLCIEKALAQSGVKREDVNYINAHAASTPAGDLNEYQAILHCFGKNPELKINST
KSMTGHLLGAAGAVEAIATVKAIHTGWIHPNINLENPDNGLDMNVLVGSKKERLDIKVAL
SNSFGFGGHNSSILFAPYKNV*

Transcript Sequence

Transcript ID

PGSC0003DMT400058923
Transcript Infomation

pacid=37462264 locus=PGSC0003DMG400022891 ID=PGSC0003DMT400058923.v4.03 annot-version=v4.03
Sequence

ATGGTGGCTTCTTCTGTGGCCTCTCCACTATGTACATGGCTCGTAGCAGCTTGCATGTCT
GTATCCAGCGAAAAGGATCAATTTTGGAAGCCTGCTTCTAATTTTCAGTCTTCCAAGTTG
ATGGGTAGGTCTGGTAGGAGAAGAAAAGCGATTACCAAGTGCAACAGTGGGAGCTTGATG
AATGGTTCTGTAATGAACAGTTCTTGGCATACTTGTTTTGGTTTTGAGCCCTGTGAGGAG
TATTATAAATCCGAGGGATTGTCTGCTTCTTTTTCGTCTTTATTTGCCGAAAATGCGTTT
TCTGTATTTGGGTTTAAGCAGGTGCCATTGAATCGAAGGCAGAGGAGAATGAGTTCTGCT
GCTCATTCTGGCAAACCCGTGGCTGTGGCCGTGCAACCTGCAATGGAAGCCACGGCAAAG
AAGAAACCTCTTATGAGGAACAGAAGAGTTGTTGTGACCGGGGTCGGTGTAGTATCACCA
ATCGGTCATGATCCAGACATGTTTTACAATAATCTTCTTGAAGGCATCAGCGGTATAAGT
CAGATTGAGGCTTTCGACTGTTCTGAATTTCCCAGTAGAATTGCTGGGGAAATCAAGGAA
TTTTCGACTAATGGGTGGGTTGCACCCAAACTTTCGAAAAGAGCAGATAAATTCATGCTC
TATATGCTTACTGCTGGAAAGAAAGCTTTGGCAGATGGTGGGATCACAGAAGATTTATTG
CAGGAATTAGATAAGGCTAGATGTGGGGTCCTAATTGGCTCAGCCCTTGGAGGGATGAAG
GTCTTCTATGATGGCATTGAGGCTTTACAGGTGTCGTACAAGAAGCTGAATCCTTTCTGT
GTACCTTTTTCAACATCCAATATGGGAGCTGCCATGCTTGCAATAGATTTGGGTTGGATG
GGTCCAAGCTACTCAATCTCCACTGCATGTGCAACAAGTAACTTCTGTATATTAAGTGCT
GCAAATCATATAATTAGAGGTGAAACAGATATGATGCTTTGTGGGGGGTCAGATTCGGCA
ATTATTCCTATAGGCTTGGGAGGTTTCACTGCTTGTGGAGTCCTGTCACAGAGGAATAGT
GATCCAACAAGGGCTTCACGTCCTTGGGATATGGACCGTGATGGATTTGTGATTGGGGAA
GGATCGGGCGTCTTACTTTTAGAAGAACTTGAACATGCAAAGAAGAGAAAGGCTAAAATA
TATGCCGAGTTTTTGGGTGGAAGCTTCACTTCTGATGCTTATCACATGATAGAGCCACAT
CCAGAAGGAAGTGGAGTTGTTCTCTGCATAGAAAAGGCCTTGGCTCAATCTGGGGTGAAA
CGTGAAGATGTCAACTATATCAATGCTCATGCTGCATCAACCCCAGCCGGTGACCTGAAC
GAATATCAGGCCATTCTGCATTGTTTTGGGAAGAACCCTGAACTTAAAATTAATTCAACA
AAGTCCATGACTGGTCATCTCCTTGGGGCTGCTGGTGCTGTGGAAGCCATCGCAACAGTC
AAGGCCATACATACAGGATGGATCCATCCAAACATCAATCTTGAGAACCCTGACAATGGC
TTGGATATGAATGTGCTGGTGGGCTCTAAGAAGGAGCGCTTGGATATCAAGGTTGCACTC
TCCAACTCATTTGGCTTTGGAGGACACAACTCATCTATTCTATTTGCTCCTTATAAGAAT
GTCTAA