Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058897
CDS Infomation

pacid=37460290 polypeptide=PGSC0003DMP400039675 locus=PGSC0003DMG400022885 ID=PGSC0003DMT400058897.v4.03 annot-version=v4.03
Sequence

ATGGGAAAGATACTCCCAGAAGGAATTGGGGAGGTTCAAGAAGTCATTGATATGTGTGAT
TTTGCTGTGGGATTGAGTCGACAACTGAATGGATCCGTTATTCCTTCTGAACGTCCTAAC
CACATGATGTTGGAGATGTGGAATCCTCTCGGGATAGTTGGTGTAATCACGGCTTTCAAC
TTCCCATGTGCTGTACTTGGATGGAATGCATGTATCGCACTGGTCTGTGGCAATTGTGTT
GTCTGGAAAGGTGCTCCAACAACACCATTGGTTACCATTGCGATGACAAAAATTGTGGCT
AGTGTATTGGAGAAAAACAATTTACCTGGTTCAATTTTTACTGCCTTCTGCGGTGGAGCT
GATGTTGGTCAAGCAATAGCAAAGGACACACGAATTCCTCTAGTTTCATTCACTGGGAGT
TCAAAGGTTGGTCTTGCAGTTCAGCAAACAGTAAGTCAGAGATTTGGAAAATGTCTATTA
GAATTAAGTGGAAATAATGCCATCATAATAATGGATGATGCGGACATTAAACTTGCTGTT
CGCTCTGTTTTATTTGCTGCTGTTGGTACGGCTGGTCAGCGCTGTACAACATGCCGGAGA
CTGCTTGTGCACGAATCAATATATGAGAAGGTACTTGAACCACTAGTTGATGTTTACAAG
CAAGTTAAGATAGGGGATCCTTTAGAAAAAGGTACCTTACTTGGGCCATTGCATACTTGT
ACTTCTAGGGAAAATTTCGAGAAGGGAATCCACAATATCAAGTCCCAGGGTGGAAAGATC
CTTACAGGTGGTTCAGTCGTAGAATCTGAGGGTAATTTTGTGCATCCAACAATTGTTGAA
ATTTCTTCAAAAGCTGAAATTGTGAAGGAAGAATTGTTTGCTCCAGTTCTGTATGTAATG
AAGTTTAAGACTTTCGAAGAAGCAGTTGAAATCAACAACTCTGTCCCTCAAGGTTTAAGT
AGTTCCATCTTCACCCGAAATCCAGAAAATATATTTAAGTGGATTGGACCTCAAGGAAGT
GATTGTGGCATCGTCAATGTGAATATCCCAACAAATGGAGCTGAAATTGGCGGTGCTTTT
GGAGGTGAGAAAGGTACTGGTGGTGGCCGTGAGGCAGGAAGTGATTCTTGGAAACAATAT
ATGAGACGCTCAACTTGTACAATCAACTATGGGAGTGAATTACCATTGGCTCAAGGAATC
AATTTTGGCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400039675
PEP Infomation

pacid=37460290 transcript=PGSC0003DMT400058897 locus=PGSC0003DMG400022885 ID=PGSC0003DMT400058897.v4.03 annot-version=v4.03
Sequence

MGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLEMWNPLGIVGVITAFN
FPCAVLGWNACIALVCGNCVVWKGAPTTPLVTIAMTKIVASVLEKNNLPGSIFTAFCGGA
DVGQAIAKDTRIPLVSFTGSSKVGLAVQQTVSQRFGKCLLELSGNNAIIIMDDADIKLAV
RSVLFAAVGTAGQRCTTCRRLLVHESIYEKVLEPLVDVYKQVKIGDPLEKGTLLGPLHTC
TSRENFEKGIHNIKSQGGKILTGGSVVESEGNFVHPTIVEISSKAEIVKEELFAPVLYVM
KFKTFEEAVEINNSVPQGLSSSIFTRNPENIFKWIGPQGSDCGIVNVNIPTNGAEIGGAF
GGEKGTGGGREAGSDSWKQYMRRSTCTINYGSELPLAQGINFG*

Transcript Sequence

Transcript ID

PGSC0003DMT400058897
Transcript Infomation

pacid=37460290 locus=PGSC0003DMG400022885 ID=PGSC0003DMT400058897.v4.03 annot-version=v4.03
Sequence

ATGGGAAAGATACTCCCAGAAGGAATTGGGGAGGTTCAAGAAGTCATTGATATGTGTGAT
TTTGCTGTGGGATTGAGTCGACAACTGAATGGATCCGTTATTCCTTCTGAACGTCCTAAC
CACATGATGTTGGAGATGTGGAATCCTCTCGGGATAGTTGGTGTAATCACGGCTTTCAAC
TTCCCATGTGCTGTACTTGGATGGAATGCATGTATCGCACTGGTCTGTGGCAATTGTGTT
GTCTGGAAAGGTGCTCCAACAACACCATTGGTTACCATTGCGATGACAAAAATTGTGGCT
AGTGTATTGGAGAAAAACAATTTACCTGGTTCAATTTTTACTGCCTTCTGCGGTGGAGCT
GATGTTGGTCAAGCAATAGCAAAGGACACACGAATTCCTCTAGTTTCATTCACTGGGAGT
TCAAAGGTTGGTCTTGCAGTTCAGCAAACAGTAAGTCAGAGATTTGGAAAATGTCTATTA
GAATTAAGTGGAAATAATGCCATCATAATAATGGATGATGCGGACATTAAACTTGCTGTT
CGCTCTGTTTTATTTGCTGCTGTTGGTACGGCTGGTCAGCGCTGTACAACATGCCGGAGA
CTGCTTGTGCACGAATCAATATATGAGAAGGTACTTGAACCACTAGTTGATGTTTACAAG
CAAGTTAAGATAGGGGATCCTTTAGAAAAAGGTACCTTACTTGGGCCATTGCATACTTGT
ACTTCTAGGGAAAATTTCGAGAAGGGAATCCACAATATCAAGTCCCAGGGTGGAAAGATC
CTTACAGGTGGTTCAGTCGTAGAATCTGAGGGTAATTTTGTGCATCCAACAATTGTTGAA
ATTTCTTCAAAAGCTGAAATTGTGAAGGAAGAATTGTTTGCTCCAGTTCTGTATGTAATG
AAGTTTAAGACTTTCGAAGAAGCAGTTGAAATCAACAACTCTGTCCCTCAAGGTTTAAGT
AGTTCCATCTTCACCCGAAATCCAGAAAATATATTTAAGTGGATTGGACCTCAAGGAAGT
GATTGTGGCATCGTCAATGTGAATATCCCAACAAATGGAGCTGAAATTGGCGGTGCTTTT
GGAGGTGAGAAAGGTACTGGTGGTGGCCGTGAGGCAGGAAGTGATTCTTGGAAACAATAT
ATGAGACGCTCAACTTGTACAATCAACTATGGGAGTGAATTACCATTGGCTCAAGGAATC
AATTTTGGCTAG