Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058868
CDS Infomation

pacid=37465061 polypeptide=PGSC0003DMP400039655 locus=PGSC0003DMG400022869 ID=PGSC0003DMT400058868.v4.03 annot-version=v4.03
Sequence

ATGCAAAGATCACGTAGGGCTCTTCTGCAAAGAAGAGCTTTGGAGAAGGCAATTTACGGG
AGGGAACGGGCTTATAAATTTTCTCTATCTGCCGTTGCTGTTCTATGGACACTTGTTTTC
CTGTTGAACTTGTGGATTGGTCATGGTGATGTCAATGAAGAGGGCTCTGGAGATTTTCCT
GTTGCTGTAAGATTATATACAGAAAATAAACCTCAATATAGTAGAGACACTTGTTCTGCT
TTGCCCAGAACCGACAGTTCATCACAGGAAATCCAATTCGAAGATTCAGCCAAGATTTCA
TGTACACAGGCAGGGAAAAGTCAAGTTACAAATAGAGAATCAGCAGATGTTTTGCAAAAC
AGCAACGCTGGTTCTGCAATTCAAGAACAAGCTAGTGAAGGAAATCCACTTTCAGAAAAG
GATGCTTCAAAATCTGACAGATTTGCTCGTGCTGTGCCTCCAGGTCTTGATGAATTCAAA
AACAAAGCATTTAACGCCAAAAATCATAACAAAATTGGCCATGCTGAAGGAATTATACAT
AGGTTAGAGCCTGGAGGATCAGAATATAATTATGCTTCTGCTTCAAAAGGAGCCAAAGTC
CTGGCTTACAACAAGGAAGCAAAAGGTGCTTCCAACATCTTGGGCAGAGATAAGGACAAG
TACCTTCGTAATCCTTGTTCAGCTGAAGAGAAGTTTGTTGTCATCGAACTGTCAGAAGAA
ACCCTTGTGGATACAGTGGAGGTCGCAAATTTTGAACATCACTCATCTAACCTAAAAGAT
TTTGAGCTCCTTGGTAGTCCCATTTATCCTACAGACACATGGATCAAACTTGGAAATTTT
ACCGCTGTAAATGTAAGGCATGCTCAGAGGTTTCTTCTTCCAGAGCCAAAATGGGTAAGA
TATCTTAAACTGAATCTTCTGGGCCATTATGGTTCAGAGTTCTATTGTACCCTGAGCATT
TTGGAGGTGTACGGAGTCGATGCTGTTGAAATTATGCTTGACGATCTTATCTCTGATCAA
GATAAGTTGTTTGTACCTGAACAAACTAGTAATGAGGATAAATCTGTGCCCACTCAACAT
GTTTCTAATCATGGTGAAACTTTTCAAAATGCCAATGATGAAATGGAAAAGGATCTTCAG
GGAGTAATGACAACTGATGTGCCTGACCCAGTGGAAGAAATTCGTCGTCAACAGGTAAAT
AGGATGCCGGGGGACAGTCTGAAGATACTGATGAAAAAAGTGCGATCTCTGGATATCAAT
TTGTCAGTTTTGGAACGATACCTGGAAGAGTTAAATTCTAGATATGGAAAGATTTTCAAA
GACTTCGATTCTGAAATGGGAGAAAAAGATGTTCTTCTTCAAAATATTAGGTCCGACATA
AGGGGTTTATCTCACAGCAAGGATGCCTTAGGTAAAGAAGTTGTCGACCTAGTATCATGG
AAATCCCTTGTTTCCACACAGCTGGAAGAAATTATCAGGGGAAATGCTATTCTCAGGTAT
ATTTTTCTCCTAATAATAGAATCAACAAGTCTCACTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400039655
PEP Infomation

pacid=37465061 transcript=PGSC0003DMT400058868 locus=PGSC0003DMG400022869 ID=PGSC0003DMT400058868.v4.03 annot-version=v4.03
Sequence

MQRSRRALLQRRALEKAIYGRERAYKFSLSAVAVLWTLVFLLNLWIGHGDVNEEGSGDFP
VAVRLYTENKPQYSRDTCSALPRTDSSSQEIQFEDSAKISCTQAGKSQVTNRESADVLQN
SNAGSAIQEQASEGNPLSEKDASKSDRFARAVPPGLDEFKNKAFNAKNHNKIGHAEGIIH
RLEPGGSEYNYASASKGAKVLAYNKEAKGASNILGRDKDKYLRNPCSAEEKFVVIELSEE
TLVDTVEVANFEHHSSNLKDFELLGSPIYPTDTWIKLGNFTAVNVRHAQRFLLPEPKWVR
YLKLNLLGHYGSEFYCTLSILEVYGVDAVEIMLDDLISDQDKLFVPEQTSNEDKSVPTQH
VSNHGETFQNANDEMEKDLQGVMTTDVPDPVEEIRRQQVNRMPGDSLKILMKKVRSLDIN
LSVLERYLEELNSRYGKIFKDFDSEMGEKDVLLQNIRSDIRGLSHSKDALGKEVVDLVSW
KSLVSTQLEEIIRGNAILRYIFLLIIESTSLT*

Transcript Sequence

Transcript ID

PGSC0003DMT400058868
Transcript Infomation

pacid=37465061 locus=PGSC0003DMG400022869 ID=PGSC0003DMT400058868.v4.03 annot-version=v4.03
Sequence

ATGCAAAGATCACGTAGGGCTCTTCTGCAAAGAAGAGCTTTGGAGAAGGCAATTTACGGG
AGGGAACGGGCTTATAAATTTTCTCTATCTGCCGTTGCTGTTCTATGGACACTTGTTTTC
CTGTTGAACTTGTGGATTGGTCATGGTGATGTCAATGAAGAGGGCTCTGGAGATTTTCCT
GTTGCTGTAAGATTATATACAGAAAATAAACCTCAATATAGTAGAGACACTTGTTCTGCT
TTGCCCAGAACCGACAGTTCATCACAGGAAATCCAATTCGAAGATTCAGCCAAGATTTCA
TGTACACAGGCAGGGAAAAGTCAAGTTACAAATAGAGAATCAGCAGATGTTTTGCAAAAC
AGCAACGCTGGTTCTGCAATTCAAGAACAAGCTAGTGAAGGAAATCCACTTTCAGAAAAG
GATGCTTCAAAATCTGACAGATTTGCTCGTGCTGTGCCTCCAGGTCTTGATGAATTCAAA
AACAAAGCATTTAACGCCAAAAATCATAACAAAATTGGCCATGCTGAAGGAATTATACAT
AGGTTAGAGCCTGGAGGATCAGAATATAATTATGCTTCTGCTTCAAAAGGAGCCAAAGTC
CTGGCTTACAACAAGGAAGCAAAAGGTGCTTCCAACATCTTGGGCAGAGATAAGGACAAG
TACCTTCGTAATCCTTGTTCAGCTGAAGAGAAGTTTGTTGTCATCGAACTGTCAGAAGAA
ACCCTTGTGGATACAGTGGAGGTCGCAAATTTTGAACATCACTCATCTAACCTAAAAGAT
TTTGAGCTCCTTGGTAGTCCCATTTATCCTACAGACACATGGATCAAACTTGGAAATTTT
ACCGCTGTAAATGTAAGGCATGCTCAGAGGTTTCTTCTTCCAGAGCCAAAATGGGTAAGA
TATCTTAAACTGAATCTTCTGGGCCATTATGGTTCAGAGTTCTATTGTACCCTGAGCATT
TTGGAGGTGTACGGAGTCGATGCTGTTGAAATTATGCTTGACGATCTTATCTCTGATCAA
GATAAGTTGTTTGTACCTGAACAAACTAGTAATGAGGATAAATCTGTGCCCACTCAACAT
GTTTCTAATCATGGTGAAACTTTTCAAAATGCCAATGATGAAATGGAAAAGGATCTTCAG
GGAGTAATGACAACTGATGTGCCTGACCCAGTGGAAGAAATTCGTCGTCAACAGGTAAAT
AGGATGCCGGGGGACAGTCTGAAGATACTGATGAAAAAAGTGCGATCTCTGGATATCAAT
TTGTCAGTTTTGGAACGATACCTGGAAGAGTTAAATTCTAGATATGGAAAGATTTTCAAA
GACTTCGATTCTGAAATGGGAGAAAAAGATGTTCTTCTTCAAAATATTAGGTCCGACATA
AGGGGTTTATCTCACAGCAAGGATGCCTTAGGTAAAGAAGTTGTCGACCTAGTATCATGG
AAATCCCTTGTTTCCACACAGCTGGAAGAAATTATCAGGGGAAATGCTATTCTCAGGTAT
ATTTTTCTCCTAATAATAGAATCAACAAGTCTCACTTAG