Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058816
CDS Infomation

pacid=37438369 polypeptide=PGSC0003DMP400039621 locus=PGSC0003DMG400022853 ID=PGSC0003DMT400058816.v4.03 annot-version=v4.03
Sequence

ATGGAGGCACCTAGAGCAACAGAAGCAGCACCCATTCCATTTTCAGATAATGTTCCTCCT
GCTTCTCCTAGGATATCACAGGCTGATTTTCAGAAAAGGGAACCCTCGAATATGGTTGCC
GGTTTGGGCCCAAGCATGAAAAAAGCAGATCTTTCCCTTCAAATACCTCCAAGACATGCA
GGCATTGGAACTGGCAGAAAGTATTCACCTCGTTCACCAGGTCCAACAGGAGGTTTTCTT
CGGGCTTTAAGCTTTAAGAAGAAAGTTGCTTCATCTGATGGTGAGAGAAGCTCTCTCCTC
AGTTCAGATCATAAGGTAGTTCCAGGAAGCCCTCTGGCAGCAAACTTCTTCTCCTGCAAT
TGGCAAAAATGTGCCTCTCTACCTGTGACCCCTGCTTCAAATTCATCTCCCTCAGTTTCC
ACGCCTATATCTGCTAGGACACATGGTGAACAACAAAGGTCAAATTCATCGCGGACTGGG
GCATCTAAAGCTTGTATGTCAAGGTCCCTTTCTGTGCCTGGGAGAAATTTTGTCATTGTT
AGATCAATGTCCTTTGCTACCCATGAAGAGCATGTTCCAGATACTGGAGATGTTTGTAGG
ATCTGTCTGGAGGCATGTGATGAAGGCAATACTTTCCAGATGGAGTGCAGCTGCAAAGGT
GACCTAAGACTTGTTCACGAGGAATGTGCGATCAAGTGGTTTAGCGTGAAAGGGAACAAA
ATTTGTGATGTTTGTCGACAGGAAGTTTCTAATTTACCTGTAACTTTGCTGCGGATTCCC
AGTACTAGTCAACAAGATAACAGATCGGAGCACAACAATTCTGGAAGAATAAGTGCTTGG
CAGGACTTTGTGGTGCTTGTTTTGATCAGCACAATATGCTATTTCTTCTTCCTTGAGCAG
TTATTGGTTCATGACATGAAAACTCAGGCGCTTGTGATTGCTGCACCATTTGCATTTACA
CTCGGTCTTTTGGCATCCATTTTTGCCGTCATCCTAGCTATTAAAGAGTACATATGGTCG
TATGCCGCTTTAGAGTTTGCTCTTGTTGCTGTTTCTCTACATGTTTTATACTCTATGCTT
CAATTGCAGGCAATCTATTCTATAATGGTAGCATCAGTTTTGGGCTTTGGTGCTACTATG
AGTATCAACGCAATGTACATCCGGTACTATTCTTGGCGATTCCAAATTGCAGAAAATTCT
AGCCCTGCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400039621
PEP Infomation

pacid=37438369 transcript=PGSC0003DMT400058816 locus=PGSC0003DMG400022853 ID=PGSC0003DMT400058816.v4.03 annot-version=v4.03
Sequence

MEAPRATEAAPIPFSDNVPPASPRISQADFQKREPSNMVAGLGPSMKKADLSLQIPPRHA
GIGTGRKYSPRSPGPTGGFLRALSFKKKVASSDGERSSLLSSDHKVVPGSPLAANFFSCN
WQKCASLPVTPASNSSPSVSTPISARTHGEQQRSNSSRTGASKACMSRSLSVPGRNFVIV
RSMSFATHEEHVPDTGDVCRICLEACDEGNTFQMECSCKGDLRLVHEECAIKWFSVKGNK
ICDVCRQEVSNLPVTLLRIPSTSQQDNRSEHNNSGRISAWQDFVVLVLISTICYFFFLEQ
LLVHDMKTQALVIAAPFAFTLGLLASIFAVILAIKEYIWSYAALEFALVAVSLHVLYSML
QLQAIYSIMVASVLGFGATMSINAMYIRYYSWRFQIAENSSPA*

Transcript Sequence

Transcript ID

PGSC0003DMT400058816
Transcript Infomation

pacid=37438369 locus=PGSC0003DMG400022853 ID=PGSC0003DMT400058816.v4.03 annot-version=v4.03
Sequence

ATGGAGGCACCTAGAGCAACAGAAGCAGCACCCATTCCATTTTCAGATAATGTTCCTCCT
GCTTCTCCTAGGATATCACAGGCTGATTTTCAGAAAAGGGAACCCTCGAATATGGTTGCC
GGTTTGGGCCCAAGCATGAAAAAAGCAGATCTTTCCCTTCAAATACCTCCAAGACATGCA
GGCATTGGAACTGGCAGAAAGTATTCACCTCGTTCACCAGGTCCAACAGGAGGTTTTCTT
CGGGCTTTAAGCTTTAAGAAGAAAGTTGCTTCATCTGATGGTGAGAGAAGCTCTCTCCTC
AGTTCAGATCATAAGGTAGTTCCAGGAAGCCCTCTGGCAGCAAACTTCTTCTCCTGCAAT
TGGCAAAAATGTGCCTCTCTACCTGTGACCCCTGCTTCAAATTCATCTCCCTCAGTTTCC
ACGCCTATATCTGCTAGGACACATGGTGAACAACAAAGGTCAAATTCATCGCGGACTGGG
GCATCTAAAGCTTGTATGTCAAGGTCCCTTTCTGTGCCTGGGAGAAATTTTGTCATTGTT
AGATCAATGTCCTTTGCTACCCATGAAGAGCATGTTCCAGATACTGGAGATGTTTGTAGG
ATCTGTCTGGAGGCATGTGATGAAGGCAATACTTTCCAGATGGAGTGCAGCTGCAAAGGT
GACCTAAGACTTGTTCACGAGGAATGTGCGATCAAGTGGTTTAGCGTGAAAGGGAACAAA
ATTTGTGATGTTTGTCGACAGGAAGTTTCTAATTTACCTGTAACTTTGCTGCGGATTCCC
AGTACTAGTCAACAAGATAACAGATCGGAGCACAACAATTCTGGAAGAATAAGTGCTTGG
CAGGACTTTGTGGTGCTTGTTTTGATCAGCACAATATGCTATTTCTTCTTCCTTGAGCAG
TTATTGGTTCATGACATGAAAACTCAGGCGCTTGTGATTGCTGCACCATTTGCATTTACA
CTCGGTCTTTTGGCATCCATTTTTGCCGTCATCCTAGCTATTAAAGAGTACATATGGTCG
TATGCCGCTTTAGAGTTTGCTCTTGTTGCTGTTTCTCTACATGTTTTATACTCTATGCTT
CAATTGCAGGCAATCTATTCTATAATGGTAGCATCAGTTTTGGGCTTTGGTGCTACTATG
AGTATCAACGCAATGTACATCCGGTACTATTCTTGGCGATTCCAAATTGCAGAAAATTCT
AGCCCTGCATGA