Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058807
CDS Infomation

pacid=37435416 polypeptide=PGSC0003DMP400039614 locus=PGSC0003DMG400022850 ID=PGSC0003DMT400058807.v4.03 annot-version=v4.03
Sequence

ATGAGAACTCAATTAGTACTAAGTTGTCTTGTTTTTGTGTGTATTGTTCTTTGTGAAGTT
GTTGCAGGTGCAGGGAATGTACTCCGCAACAACTTCTATAAGAGCACTCGTTGTCCAAAT
GCTGAACAACTTATTAGAAATATTACTTGGAGCAAAGCTAAAAATGATGTTACATTGGGT
GCTAGATTGCTTCGACTCCACTACCATGATTGTTTCCTTAGGGGGTGTGATGCATCAGTA
TTGCTGGATACAGAGGGAACAGAACAATCAGAGAAGGAGGCTGGACCAAATCTCTCTTTG
GGTGGTTTCGATGTAATTGATGATATCAAGAGACAAGTTGAGGCTAAATGTCCTGGCATT
GTTTCTTGTGCTGACATTTTAGCTTTATCTGCTCGTGATGCTGTTTCTTTCCCTTTTAAA
ACTTCAATGTGGGAAGTGGAGACCGGAAGAAAAGATGGAAATGTTTCCCTTGCAAGTGAA
GTGAGCTCAAACTTACCTTTACCAGATTCAAATATTTCAACCCTTCAGCAACTCTTTGCA
AAGAAAGGCCTAAATGTCGATGATCTCGTTGCATTATCAGGTGCTCATACAATTGGTTTT
GCTCACTGTGGAGCATTCTCAAAAAGACTCTTCAATTTCACTGGCAAAGGTGACATGGAT
CCATCTCTCAATGCTACATATGCTGAATCTTTGAAGAAATCATGCACCAATCTAGCCAAT
ATAGTGGAAATGGACCCTATGAGCTCAACTTCATTTGATAGCAATTATTTCAACATTCTT
ATTAATCAGAATAAAGGATTGTTCCAATCAGATGCAGCACTTCTCAACGACACAAACTCA
GTAAATGTTGTCAAGAAATTGCAAAACGATAAGGCTTTCTTCGTTGAGTTTGGGAAATCC
ATGAAGAAAATGGGAGCCATTGAAGTTCTTACTGGAAATGCTGGACAAATCAGGAAGAAT
TGTCGCGTCAAAAACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400039614
PEP Infomation

pacid=37435416 transcript=PGSC0003DMT400058807 locus=PGSC0003DMG400022850 ID=PGSC0003DMT400058807.v4.03 annot-version=v4.03
Sequence

MRTQLVLSCLVFVCIVLCEVVAGAGNVLRNNFYKSTRCPNAEQLIRNITWSKAKNDVTLG
ARLLRLHYHDCFLRGCDASVLLDTEGTEQSEKEAGPNLSLGGFDVIDDIKRQVEAKCPGI
VSCADILALSARDAVSFPFKTSMWEVETGRKDGNVSLASEVSSNLPLPDSNISTLQQLFA
KKGLNVDDLVALSGAHTIGFAHCGAFSKRLFNFTGKGDMDPSLNATYAESLKKSCTNLAN
IVEMDPMSSTSFDSNYFNILINQNKGLFQSDAALLNDTNSVNVVKKLQNDKAFFVEFGKS
MKKMGAIEVLTGNAGQIRKNCRVKN*

Transcript Sequence

Transcript ID

PGSC0003DMT400058807
Transcript Infomation

pacid=37435416 locus=PGSC0003DMG400022850 ID=PGSC0003DMT400058807.v4.03 annot-version=v4.03
Sequence

ATGAGAACTCAATTAGTACTAAGTTGTCTTGTTTTTGTGTGTATTGTTCTTTGTGAAGTT
GTTGCAGGTGCAGGGAATGTACTCCGCAACAACTTCTATAAGAGCACTCGTTGTCCAAAT
GCTGAACAACTTATTAGAAATATTACTTGGAGCAAAGCTAAAAATGATGTTACATTGGGT
GCTAGATTGCTTCGACTCCACTACCATGATTGTTTCCTTAGGGGGTGTGATGCATCAGTA
TTGCTGGATACAGAGGGAACAGAACAATCAGAGAAGGAGGCTGGACCAAATCTCTCTTTG
GGTGGTTTCGATGTAATTGATGATATCAAGAGACAAGTTGAGGCTAAATGTCCTGGCATT
GTTTCTTGTGCTGACATTTTAGCTTTATCTGCTCGTGATGCTGTTTCTTTCCCTTTTAAA
ACTTCAATGTGGGAAGTGGAGACCGGAAGAAAAGATGGAAATGTTTCCCTTGCAAGTGAA
GTGAGCTCAAACTTACCTTTACCAGATTCAAATATTTCAACCCTTCAGCAACTCTTTGCA
AAGAAAGGCCTAAATGTCGATGATCTCGTTGCATTATCAGGTGCTCATACAATTGGTTTT
GCTCACTGTGGAGCATTCTCAAAAAGACTCTTCAATTTCACTGGCAAAGGTGACATGGAT
CCATCTCTCAATGCTACATATGCTGAATCTTTGAAGAAATCATGCACCAATCTAGCCAAT
ATAGTGGAAATGGACCCTATGAGCTCAACTTCATTTGATAGCAATTATTTCAACATTCTT
ATTAATCAGAATAAAGGATTGTTCCAATCAGATGCAGCACTTCTCAACGACACAAACTCA
GTAAATGTTGTCAAGAAATTGCAAAACGATAAGGCTTTCTTCGTTGAGTTTGGGAAATCC
ATGAAGAAAATGGGAGCCATTGAAGTTCTTACTGGAAATGCTGGACAAATCAGGAAGAAT
TGTCGCGTCAAAAACTAA