Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058761
CDS Infomation

pacid=37476850 polypeptide=PGSC0003DMP400039584 locus=PGSC0003DMG400022829 ID=PGSC0003DMT400058761.v4.03 annot-version=v4.03
Sequence

ATGGCAGTTCGTACATTTCTAAACCGGAATGTGTCAGATCTGTGCGTAGGGAAGCCGGCG
TTAAAGCCATTGTCGGCGGCAGCCACCGTATCGGAAGCGTTAGCTCTGTTGAATAAATCA
AGCGAGCCTCATGTGAGCGTGTGGAGCTGTGACCATTCGAAGAATGTTGTGGAAGATGAA
TGTGAATATCGTTGTGTTGGGAAGATTTGCATGGTTGATGTGATTTGCTTTCTCTGTAAA
AATGAGAATTCGGATAATCCTTCGAAGGCTTTGGAGACATCCGTTTCACAGATTTTGCCC
AAAGGAAATTTAATTGTGAGGCATTTGGCGCCAAATTCAAGCTTGCTGGAGGCAATAGAT
TACATTCTTGAAGGCACCCAGAATCTGGTTATACCAGTCCAAAATTACATTGGCGGAAAA
TCAAGGAAAACTCAGAGTAAATCATCCTCCCTGAGTTGCAAACATCGCGATGGAGTTGAA
TACTGCTGGCTAACGCAAGAAGATGTTGTCCGCTTTCTTCTGAACTTTATTGGTGTGTTC
TCCCCTATCACCATTTCTTCAATTGAATCTCTCAACATCATAGATTGTAATGTGATGACT
ATTCGTTACCATGAACCTGCAATGTCTGCCTTAGATTCCCTTACTCTTGCACATGTTGAG
CAAACTTCAGTGGCAGTTGTTGATGATCTCGACAGATTAATTGGTGAAATCTCCCCTTCG
ACTCTTGCCTATTGTTATGAGACTGCAGCAGCAGCAGTCATGACACTTTCAGCTGGTGAT
CTGTTGGCTTACATCGACTGTGGTGGTCCTCCAGAGGACTTGGTTGATCTCGTGAAGGTG
ATATTACAAGAGAAAAAGCTTGGTGCATTATTGGAACTAATGGATGAAGAGTTGTCTTTG
TCTTCGTCATCATCATGTTCTGTTTCTAGTTGTTCTTTTGATGACGAGTTAGGGGTTTGC
AGAAATAATGGCTCAGGACGATATTCGTCAGCTAGAAGGGCAGAGGCCATCACTTGTTAT
TCAAACAGTTCATTGGTTGCTGTGATGATTCAAGCACTTGCACATCGTGCAAGTTCCGTT
TGGGTCATGCATGAGGATAACACTTTGATTGGCTGTGTAACTTTTAAAGGAATCCTCAAA
GTTTTCAGGAGCCTTGCAAATGCGAGGCCGATAACCAGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400039584
PEP Infomation

pacid=37476850 transcript=PGSC0003DMT400058761 locus=PGSC0003DMG400022829 ID=PGSC0003DMT400058761.v4.03 annot-version=v4.03
Sequence

MAVRTFLNRNVSDLCVGKPALKPLSAAATVSEALALLNKSSEPHVSVWSCDHSKNVVEDE
CEYRCVGKICMVDVICFLCKNENSDNPSKALETSVSQILPKGNLIVRHLAPNSSLLEAID
YILEGTQNLVIPVQNYIGGKSRKTQSKSSSLSCKHRDGVEYCWLTQEDVVRFLLNFIGVF
SPITISSIESLNIIDCNVMTIRYHEPAMSALDSLTLAHVEQTSVAVVDDLDRLIGEISPS
TLAYCYETAAAAVMTLSAGDLLAYIDCGGPPEDLVDLVKVILQEKKLGALLELMDEELSL
SSSSSCSVSSCSFDDELGVCRNNGSGRYSSARRAEAITCYSNSSLVAVMIQALAHRASSV
WVMHEDNTLIGCVTFKGILKVFRSLANARPITR*

Transcript Sequence

Transcript ID

PGSC0003DMT400058761
Transcript Infomation

pacid=37476850 locus=PGSC0003DMG400022829 ID=PGSC0003DMT400058761.v4.03 annot-version=v4.03
Sequence

ATGGCAGTTCGTACATTTCTAAACCGGAATGTGTCAGATCTGTGCGTAGGGAAGCCGGCG
TTAAAGCCATTGTCGGCGGCAGCCACCGTATCGGAAGCGTTAGCTCTGTTGAATAAATCA
AGCGAGCCTCATGTGAGCGTGTGGAGCTGTGACCATTCGAAGAATGTTGTGGAAGATGAA
TGTGAATATCGTTGTGTTGGGAAGATTTGCATGGTTGATGTGATTTGCTTTCTCTGTAAA
AATGAGAATTCGGATAATCCTTCGAAGGCTTTGGAGACATCCGTTTCACAGATTTTGCCC
AAAGGAAATTTAATTGTGAGGCATTTGGCGCCAAATTCAAGCTTGCTGGAGGCAATAGAT
TACATTCTTGAAGGCACCCAGAATCTGGTTATACCAGTCCAAAATTACATTGGCGGAAAA
TCAAGGAAAACTCAGAGTAAATCATCCTCCCTGAGTTGCAAACATCGCGATGGAGTTGAA
TACTGCTGGCTAACGCAAGAAGATGTTGTCCGCTTTCTTCTGAACTTTATTGGTGTGTTC
TCCCCTATCACCATTTCTTCAATTGAATCTCTCAACATCATAGATTGTAATGTGATGACT
ATTCGTTACCATGAACCTGCAATGTCTGCCTTAGATTCCCTTACTCTTGCACATGTTGAG
CAAACTTCAGTGGCAGTTGTTGATGATCTCGACAGATTAATTGGTGAAATCTCCCCTTCG
ACTCTTGCCTATTGTTATGAGACTGCAGCAGCAGCAGTCATGACACTTTCAGCTGGTGAT
CTGTTGGCTTACATCGACTGTGGTGGTCCTCCAGAGGACTTGGTTGATCTCGTGAAGGTG
ATATTACAAGAGAAAAAGCTTGGTGCATTATTGGAACTAATGGATGAAGAGTTGTCTTTG
TCTTCGTCATCATCATGTTCTGTTTCTAGTTGTTCTTTTGATGACGAGTTAGGGGTTTGC
AGAAATAATGGCTCAGGACGATATTCGTCAGCTAGAAGGGCAGAGGCCATCACTTGTTAT
TCAAACAGTTCATTGGTTGCTGTGATGATTCAAGCACTTGCACATCGTGCAAGTTCCGTT
TGGGTCATGCATGAGGATAACACTTTGATTGGCTGTGTAACTTTTAAAGGAATCCTCAAA
GTTTTCAGGAGCCTTGCAAATGCGAGGCCGATAACCAGATAA