Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058708
CDS Infomation

pacid=37478327 polypeptide=PGSC0003DMP400039543 locus=PGSC0003DMG400022806 ID=PGSC0003DMT400058708.v4.03 annot-version=v4.03
Sequence

ATGCAATCTGGGGAATGTTCTGTTGTGGCTCCTCATTCCCCACCCTGGAAGTTCTCTACA
TTTGAGGAAGATGAAATGCATGAAACCGAAAAAACATCCTCCATAGTAGTCTCGAAAAGT
TTTAATGCAAGTGCAACCAAAGGCTCCAGAGTTCACAATTCGTGTGGGGTGGCAGGCAAC
TTCGTTATAATGACAGCGCTCAGGAGCAAGATCCTCACTTTGAGAGATTTGCTTGACTTA
TCGCCGTGTTTTGGCTCTGCATCCCTAAATGAGTTGCTGATATTAACACTGAAGGATCTG
CATAAAATGCATCCTTCCGTCAACACAAATGTTCCATTGTCAAGTATTGATGGAGCAGGA
ATGGATCAGGCACTACAATGCTTTTGTGATACTTTGAAATCAATCGGGGCAATATGGACG
GGTGATGATGAATTCATAACGAAATTGGACGAGGAGTACAGTAATCTCCACATTGATCTA
AGACGTTATGGATTGGTATTGCTTGACGAGATGATTAAACTAGCCACTGAAAGGGTGTTT
GATATGATGGACGAGGATGACCAGACGAGAGATGAAAGTCCTTCATCCGATGCATTTGGG
AGGGCTCTTCCGGAGTCTCATTCGGACAACGAGTCTTCCCTCTCAAGCCCTCCACCTACC
CCAACTTCAGTCCTCTCCTCAGCAATTAGTGCTTCACTGAAGAGTGAACTCAAGGCTAAA
GAAACTGAGAAGTTGAATCCTATCGATGTAAAACGCCTCTATTTCGACTTGCTCCCTTAT
GCAATAGATCAAGATCCAAATTATGTTGTTCAGCTAGCAACCAACTTCAGTGAGCAAATA
TCAGAAGTACAAGCAAAGGTTGGTTCTGAAGTGAAAGCAGGGGATGCTTATGAATTTGGC
CAAGATTTCGAAATGTTGGACTCAGCAGATATTCTACTAACTGATATGGATAATGTATCA
GAAAACGGAGGAACTTGTCAGACTGGTTCTACAAATAATCAGCTATTGTCAAGTCGTGTC
TCGTTAGACTTGGTTTTACCTCCATCTACACTCCCCGAGTTGAGATCAAACATCGAAGAA
CAAGCTGCAGCTCCACTAGCACCATTCACATTATCTTCAAATGTCATAAAGTCACCATCT
TTGACATCAAGAAACATAGTTACACCTCCGTCTCCGCCCCCACTACCACCACATCCCATG
ATGGTGCCTCCACCACCTCCATTGCCACCTAAGACCACAACCAATATAATAACACTTCCA
CCTCCACCCCCTCCCATGACATCAGGAAATGTAATAGCACCTCCATCTCAGCCTCCGCCT
CCACCACCTCCATTGCCACCTAAGACAACAACACATATAATAACACTTCCACCTCCACCA
CCGCAGCCTCTCATGACATCCAGAAATGTAATATCACCTCCACCTCCACCTCCCATTGGA
TCAAAGGGTATGACACCTCCACCACCACCGATGGCTTCAAATGGAGCAGTGCCAGCACCA
CCTCCACCCATGCCAAAGGGAAAAGGACCGGCACCTCCACCACCAATAGGTTTTATAGGT
GTGTTACGAGTCAAGAGAGCAGCCACTAAATTGAAAAGATCAACGCAAATGGGTAATCTT
TATCGACTTCTCAAGCTCCAAGTTGAAGGCTCTAGTTTAGATAGTACATCACATCACAAA
ATGGGAAAAGTTGGTGCCTCAGCAGGAGGTAAACAGGGAATGGCTGATGCATTAGCAGAG
ATGACAAAGAGGTCAGCATATTTCCATCAAATTGAAGAGGATGTTAAAAATTACGCGAAA
ACAATCAAGGAGATAAACACAGCCATTACTTCTTTTAAAACATCAGATATGTCCGAGCTC
ATTAAGTTCCATGGATATGTAGAATCTCACCTTGAGAAATTAACCGATGAATCTCAGGTG
CTAGCAAGATTTGAAGATTTTCCTACGAAAAAGTTGGAAGAACTCAGAATGGGAGCAGCA
TTATATTCCAAGTTAGACACAATAGCCACTACTCTACGAAATTGGTCGATAGTCTCCCCT
GTTGGCGAACACCTTGACAAAGCTGAGAGTTACTTTAACAAGATCAAAGTAGAAATTGAC
ACATTGGAACGAACAAAAGACGAAGAGGCCAAGAAATTTATAAGCCATAACATTCATTTT
GATTTCGGAATCCTCATTCGTATCAAAGAACTAATGATAGATGTTTCCTCAAACTGCATG
GAACTTGCCATGAAGGAGAGTAGAGAAGCAAAGACAAAGGAAAACAGAAGAGGTGGATCG
AAAAATGGATCACGTAAACTGTTATGGAAGGCCTTCCAGTTCGCGTTCAGAGTCTATAGT
TTCGCTGGTGGACAAGATGATCGCGCTGACAAGTTGACAAGGGAGTTGGCTCAAGAAATA
CAAAGAGATCCTAACCAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400039543
PEP Infomation

pacid=37478327 transcript=PGSC0003DMT400058708 locus=PGSC0003DMG400022806 ID=PGSC0003DMT400058708.v4.03 annot-version=v4.03
Sequence

MQSGECSVVAPHSPPWKFSTFEEDEMHETEKTSSIVVSKSFNASATKGSRVHNSCGVAGN
FVIMTALRSKILTLRDLLDLSPCFGSASLNELLILTLKDLHKMHPSVNTNVPLSSIDGAG
MDQALQCFCDTLKSIGAIWTGDDEFITKLDEEYSNLHIDLRRYGLVLLDEMIKLATERVF
DMMDEDDQTRDESPSSDAFGRALPESHSDNESSLSSPPPTPTSVLSSAISASLKSELKAK
ETEKLNPIDVKRLYFDLLPYAIDQDPNYVVQLATNFSEQISEVQAKVGSEVKAGDAYEFG
QDFEMLDSADILLTDMDNVSENGGTCQTGSTNNQLLSSRVSLDLVLPPSTLPELRSNIEE
QAAAPLAPFTLSSNVIKSPSLTSRNIVTPPSPPPLPPHPMMVPPPPPLPPKTTTNIITLP
PPPPPMTSGNVIAPPSQPPPPPPPLPPKTTTHIITLPPPPPQPLMTSRNVISPPPPPPIG
SKGMTPPPPPMASNGAVPAPPPPMPKGKGPAPPPPIGFIGVLRVKRAATKLKRSTQMGNL
YRLLKLQVEGSSLDSTSHHKMGKVGASAGGKQGMADALAEMTKRSAYFHQIEEDVKNYAK
TIKEINTAITSFKTSDMSELIKFHGYVESHLEKLTDESQVLARFEDFPTKKLEELRMGAA
LYSKLDTIATTLRNWSIVSPVGEHLDKAESYFNKIKVEIDTLERTKDEEAKKFISHNIHF
DFGILIRIKELMIDVSSNCMELAMKESREAKTKENRRGGSKNGSRKLLWKAFQFAFRVYS
FAGGQDDRADKLTRELAQEIQRDPNQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400058708
Transcript Infomation

pacid=37478327 locus=PGSC0003DMG400022806 ID=PGSC0003DMT400058708.v4.03 annot-version=v4.03
Sequence

ATGCAATCTGGGGAATGTTCTGTTGTGGCTCCTCATTCCCCACCCTGGAAGTTCTCTACA
TTTGAGGAAGATGAAATGCATGAAACCGAAAAAACATCCTCCATAGTAGTCTCGAAAAGT
TTTAATGCAAGTGCAACCAAAGGCTCCAGAGTTCACAATTCGTGTGGGGTGGCAGGCAAC
TTCGTTATAATGACAGCGCTCAGGAGCAAGATCCTCACTTTGAGAGATTTGCTTGACTTA
TCGCCGTGTTTTGGCTCTGCATCCCTAAATGAGTTGCTGATATTAACACTGAAGGATCTG
CATAAAATGCATCCTTCCGTCAACACAAATGTTCCATTGTCAAGTATTGATGGAGCAGGA
ATGGATCAGGCACTACAATGCTTTTGTGATACTTTGAAATCAATCGGGGCAATATGGACG
GGTGATGATGAATTCATAACGAAATTGGACGAGGAGTACAGTAATCTCCACATTGATCTA
AGACGTTATGGATTGGTATTGCTTGACGAGATGATTAAACTAGCCACTGAAAGGGTGTTT
GATATGATGGACGAGGATGACCAGACGAGAGATGAAAGTCCTTCATCCGATGCATTTGGG
AGGGCTCTTCCGGAGTCTCATTCGGACAACGAGTCTTCCCTCTCAAGCCCTCCACCTACC
CCAACTTCAGTCCTCTCCTCAGCAATTAGTGCTTCACTGAAGAGTGAACTCAAGGCTAAA
GAAACTGAGAAGTTGAATCCTATCGATGTAAAACGCCTCTATTTCGACTTGCTCCCTTAT
GCAATAGATCAAGATCCAAATTATGTTGTTCAGCTAGCAACCAACTTCAGTGAGCAAATA
TCAGAAGTACAAGCAAAGGTTGGTTCTGAAGTGAAAGCAGGGGATGCTTATGAATTTGGC
CAAGATTTCGAAATGTTGGACTCAGCAGATATTCTACTAACTGATATGGATAATGTATCA
GAAAACGGAGGAACTTGTCAGACTGGTTCTACAAATAATCAGCTATTGTCAAGTCGTGTC
TCGTTAGACTTGGTTTTACCTCCATCTACACTCCCCGAGTTGAGATCAAACATCGAAGAA
CAAGCTGCAGCTCCACTAGCACCATTCACATTATCTTCAAATGTCATAAAGTCACCATCT
TTGACATCAAGAAACATAGTTACACCTCCGTCTCCGCCCCCACTACCACCACATCCCATG
ATGGTGCCTCCACCACCTCCATTGCCACCTAAGACCACAACCAATATAATAACACTTCCA
CCTCCACCCCCTCCCATGACATCAGGAAATGTAATAGCACCTCCATCTCAGCCTCCGCCT
CCACCACCTCCATTGCCACCTAAGACAACAACACATATAATAACACTTCCACCTCCACCA
CCGCAGCCTCTCATGACATCCAGAAATGTAATATCACCTCCACCTCCACCTCCCATTGGA
TCAAAGGGTATGACACCTCCACCACCACCGATGGCTTCAAATGGAGCAGTGCCAGCACCA
CCTCCACCCATGCCAAAGGGAAAAGGACCGGCACCTCCACCACCAATAGGTTTTATAGGT
GTGTTACGAGTCAAGAGAGCAGCCACTAAATTGAAAAGATCAACGCAAATGGGTAATCTT
TATCGACTTCTCAAGCTCCAAGTTGAAGGCTCTAGTTTAGATAGTACATCACATCACAAA
ATGGGAAAAGTTGGTGCCTCAGCAGGAGGTAAACAGGGAATGGCTGATGCATTAGCAGAG
ATGACAAAGAGGTCAGCATATTTCCATCAAATTGAAGAGGATGTTAAAAATTACGCGAAA
ACAATCAAGGAGATAAACACAGCCATTACTTCTTTTAAAACATCAGATATGTCCGAGCTC
ATTAAGTTCCATGGATATGTAGAATCTCACCTTGAGAAATTAACCGATGAATCTCAGGTG
CTAGCAAGATTTGAAGATTTTCCTACGAAAAAGTTGGAAGAACTCAGAATGGGAGCAGCA
TTATATTCCAAGTTAGACACAATAGCCACTACTCTACGAAATTGGTCGATAGTCTCCCCT
GTTGGCGAACACCTTGACAAAGCTGAGAGTTACTTTAACAAGATCAAAGTAGAAATTGAC
ACATTGGAACGAACAAAAGACGAAGAGGCCAAGAAATTTATAAGCCATAACATTCATTTT
GATTTCGGAATCCTCATTCGTATCAAAGAACTAATGATAGATGTTTCCTCAAACTGCATG
GAACTTGCCATGAAGGAGAGTAGAGAAGCAAAGACAAAGGAAAACAGAAGAGGTGGATCG
AAAAATGGATCACGTAAACTGTTATGGAAGGCCTTCCAGTTCGCGTTCAGAGTCTATAGT
TTCGCTGGTGGACAAGATGATCGCGCTGACAAGTTGACAAGGGAGTTGGCTCAAGAAATA
CAAAGAGATCCTAACCAATAG