Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058696
CDS Infomation

pacid=37437329 polypeptide=PGSC0003DMP400039538 locus=PGSC0003DMG401022797 ID=PGSC0003DMT400058696.v4.03 annot-version=v4.03
Sequence

ATGGACAGAAATCAAGAAATTGCATTGGCTAAAATGAGGAAATCAGTTGAAAAGCCTGGA
TCTTCCACTGAAAGTTATGGTGAGAAGACATTAATGAGGTTCTTGATTGCGAGATCAATG
GACCCAGAGAAAGCTGCAAAGATGTTTTGTCAGTGGAAAAAATGGAGGGCTGAGATGGTT
CCACTTGGTTACATCTCTGATTCTGAAGTTGCAAATGAATTAGCAGCTGAAAAACTTTAT
TTGCAGGGATTGTCCAAGAGTGGACACCCTATTGTGATAGTCAAAGTTAACAAGCATTTT
CCTTCCAAAGATCAAGTTCAATTCAAGAAATTCGTCATTCATCTACTAGACAAAACAATT
GCAAGTTCATTCAAAGGTAGGGAAATAGGAAATGAGAAACTTATTGCAATTCTTGATCTC
AAGAATATTACCTATAGCAATGTTGATACTCGTGGATTGATAACTGGTTTTCAGTTTTTA
CAGGCATACTACCCTGAGCGCTTAGCGGCTTGTTACCTTTTACACATGCCACAATTCTTT
GTCACCATATGGCGATTTATTTGTCGCTTCCTTGAAAAGGCAACTCAAGAGAAGATGAGG
ATTGTTACAAGTGAAGAAGAAAAGGAAGAGTTCATCCGAGAGGTCGGTGAAGATGTCTTA
CCGGAGGAGTATGGAGGGCGCGCTAAACTTGTACTTATGCAGGATGTTGCTGTGAGCTAC
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400039538
PEP Infomation

pacid=37437329 transcript=PGSC0003DMT400058696 locus=PGSC0003DMG401022797 ID=PGSC0003DMT400058696.v4.03 annot-version=v4.03
Sequence

MDRNQEIALAKMRKSVEKPGSSTESYGEKTLMRFLIARSMDPEKAAKMFCQWKKWRAEMV
PLGYISDSEVANELAAEKLYLQGLSKSGHPIVIVKVNKHFPSKDQVQFKKFVIHLLDKTI
ASSFKGREIGNEKLIAILDLKNITYSNVDTRGLITGFQFLQAYYPERLAACYLLHMPQFF
VTIWRFICRFLEKATQEKMRIVTSEEEKEEFIREVGEDVLPEEYGGRAKLVLMQDVAVSY
*

Transcript Sequence

Transcript ID

PGSC0003DMT400058696
Transcript Infomation

pacid=37437329 locus=PGSC0003DMG401022797 ID=PGSC0003DMT400058696.v4.03 annot-version=v4.03
Sequence

ATGGACAGAAATCAAGAAATTGCATTGGCTAAAATGAGGAAATCAGTTGAAAAGCCTGGA
TCTTCCACTGAAAGTTATGGTGAGAAGACATTAATGAGGTTCTTGATTGCGAGATCAATG
GACCCAGAGAAAGCTGCAAAGATGTTTTGTCAGTGGAAAAAATGGAGGGCTGAGATGGTT
CCACTTGGTTACATCTCTGATTCTGAAGTTGCAAATGAATTAGCAGCTGAAAAACTTTAT
TTGCAGGGATTGTCCAAGAGTGGACACCCTATTGTGATAGTCAAAGTTAACAAGCATTTT
CCTTCCAAAGATCAAGTTCAATTCAAGAAATTCGTCATTCATCTACTAGACAAAACAATT
GCAAGTTCATTCAAAGGTAGGGAAATAGGAAATGAGAAACTTATTGCAATTCTTGATCTC
AAGAATATTACCTATAGCAATGTTGATACTCGTGGATTGATAACTGGTTTTCAGTTTTTA
CAGGCATACTACCCTGAGCGCTTAGCGGCTTGTTACCTTTTACACATGCCACAATTCTTT
GTCACCATATGGCGATTTATTTGTCGCTTCCTTGAAAAGGCAACTCAAGAGAAGATGAGG
ATTGTTACAAGTGAAGAAGAAAAGGAAGAGTTCATCCGAGAGGTCGGTGAAGATGTCTTA
CCGGAGGAGTATGGAGGGCGCGCTAAACTTGTACTTATGCAGGATGTTGCTGTGAGCTAC
TAA