Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058659
CDS Infomation

pacid=37437409 polypeptide=PGSC0003DMP400039510 locus=PGSC0003DMG400022788 ID=PGSC0003DMT400058659.v4.03 annot-version=v4.03
Sequence

ATGATGCTGGCTTTTGCAAGTCCTTCCTGCTGCAGTGTCCATACAAGTTCAACTTGCCAT
ACTTTACTTAGAGAACTGGAGCAAATATGGAAGGACATTGGAGAGACTGAAGCTGATAAA
GACCGTATGCTGTCGGAGCTGGAGAGAGAGTGTTTGGAAGTTTATCGAAGAAAAGTTGAA
GAAGCTGCAAATACAAAAGCATGTCTTCATCAATCTGTTGCAACCAAAGAAGCCGAGGTT
GCAACATTAATGGCTGCTCTTGGTGAACTCAATATTAATTCACTGAAACAGCCAGAGAAG
AAGTCAGCATCATTGAAGGAGCAACTAGCATTAGTTACACCACTTATCGATGATTTAAGA
GTTAAGAAAGATGAAAGAGTTAAGCAGTTTGCAGATGTAAAGACACAAATCGACAAGATA
ACTAGTGAGATTTCCGGGTATTCTAATATCATCAATGCCGTGAGTTCCTTAAATCTGGAA
GATCATGACTTGTCACTGAGAAACCTCTCCGAATACAAATCTCATCTTCGTGCTCTTCAA
AAGGAGAAGTCTGAGCGGATCCAAAAAGTTGTGGACTGTGTAAATGAGGTGCACTCTTTG
TGTGGTGTGCTGGGGCTGGATTTTGGCAAAACTGTGAGTGATGTGCATCCAAGCTTGCAT
GAAACAAGCCTGGGACAATCCACTAACATTAGCGTCAGCGCATTGGAAAGTCTTGAACAG
GCCATCTTCAGACTGAAGACAGAAAGAAAAGTTCGATATCAGAAGCTAAAAGATGTTGCT
GGATTGTTGTTTGAGCTTTGGACCTTAATGGATACAACCAGAGAAGAAAAGAGTAAGTTA
TCGAGGATCACTTGCGTTCTTCGTCTTTCTGAGGCAGAGGTTACAGAACCAGGTGCTCTT
TCTTTGGAGGTTATTCAACAGATATCGACAGAAGTGGAGAGGCTGACCAAATTGAAAGCA
AGCAGGATGAAGGAGTTGGTCATAAAAAGGAGAGCAGAGCTGGAGGACATATGCAACAAA
AACCATATCGATCCTGATCCAAGTACTTCAGCCGATAAATCTAGTGCAATGATAGACTCT
GGTCTTGTGGACCCTTGTGAACTCCTGGAAAATATTGAAGCACAAATAAACAAAGCAAAG
GATGAAGCTTTAAGTCGAAAAGATATAATGGATAAAATAGACTGGTGGCTTTTTGCTTGT
GAGGAGGAAAACTGGCTTGAAGATTATAACCAGGATTATAGACGTTACAGTGGTGGAAGA
GGTGCTCACATAAACTTAAAGCGGGCTGAGCAAGCTAGAATTAAAGTGACTAAAATTCCA
GTCGTGGTTAACGCTTTGATTAACAAGACACTAGCTTGGGAAGATGAGAAACAGAAATTG
TTTCTTTATGATGGGGTGAGATTGGTGTCAATATTGGAGGATTACAAAGTGGTTAGACAG
CAGAAAGAAGAGTCAAAGAAACGTGCTCGGGATCAGAAGAAACTCCATGATATGCTGCTG
GCAGAGAAGGAATCTGCATATGGTTCCAAACCTAGCCCGAGAAGAAGCAGCAGTTTTAGG
AAGGCAAATGGTTACCATGCCAATGGAAATGGATCTGTTACACCCTCGCCACGCAGGAGC
TCAATGTCTTGTGCAACTCCAGAGCTCTTAACACCCCGTTCCAACTCTGTGCGGCACAAT
GGTTATTTCAAGGAAATGACAAGGCTCTCTACCGGCCCTCTCAACTTTGTGGCTATGGCT
AAAGAAGATACCGTGTCATTCTCTTCTATTTCCGGTTCTGATCCAGAATCTCCACTTCAA
GCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400039510
PEP Infomation

pacid=37437409 transcript=PGSC0003DMT400058659 locus=PGSC0003DMG400022788 ID=PGSC0003DMT400058659.v4.03 annot-version=v4.03
Sequence

MMLAFASPSCCSVHTSSTCHTLLRELEQIWKDIGETEADKDRMLSELERECLEVYRRKVE
EAANTKACLHQSVATKEAEVATLMAALGELNINSLKQPEKKSASLKEQLALVTPLIDDLR
VKKDERVKQFADVKTQIDKITSEISGYSNIINAVSSLNLEDHDLSLRNLSEYKSHLRALQ
KEKSERIQKVVDCVNEVHSLCGVLGLDFGKTVSDVHPSLHETSLGQSTNISVSALESLEQ
AIFRLKTERKVRYQKLKDVAGLLFELWTLMDTTREEKSKLSRITCVLRLSEAEVTEPGAL
SLEVIQQISTEVERLTKLKASRMKELVIKRRAELEDICNKNHIDPDPSTSADKSSAMIDS
GLVDPCELLENIEAQINKAKDEALSRKDIMDKIDWWLFACEEENWLEDYNQDYRRYSGGR
GAHINLKRAEQARIKVTKIPVVVNALINKTLAWEDEKQKLFLYDGVRLVSILEDYKVVRQ
QKEESKKRARDQKKLHDMLLAEKESAYGSKPSPRRSSSFRKANGYHANGNGSVTPSPRRS
SMSCATPELLTPRSNSVRHNGYFKEMTRLSTGPLNFVAMAKEDTVSFSSISGSDPESPLQ
A*

Transcript Sequence

Transcript ID

PGSC0003DMT400058659
Transcript Infomation

pacid=37437409 locus=PGSC0003DMG400022788 ID=PGSC0003DMT400058659.v4.03 annot-version=v4.03
Sequence

ATGATGCTGGCTTTTGCAAGTCCTTCCTGCTGCAGTGTCCATACAAGTTCAACTTGCCAT
ACTTTACTTAGAGAACTGGAGCAAATATGGAAGGACATTGGAGAGACTGAAGCTGATAAA
GACCGTATGCTGTCGGAGCTGGAGAGAGAGTGTTTGGAAGTTTATCGAAGAAAAGTTGAA
GAAGCTGCAAATACAAAAGCATGTCTTCATCAATCTGTTGCAACCAAAGAAGCCGAGGTT
GCAACATTAATGGCTGCTCTTGGTGAACTCAATATTAATTCACTGAAACAGCCAGAGAAG
AAGTCAGCATCATTGAAGGAGCAACTAGCATTAGTTACACCACTTATCGATGATTTAAGA
GTTAAGAAAGATGAAAGAGTTAAGCAGTTTGCAGATGTAAAGACACAAATCGACAAGATA
ACTAGTGAGATTTCCGGGTATTCTAATATCATCAATGCCGTGAGTTCCTTAAATCTGGAA
GATCATGACTTGTCACTGAGAAACCTCTCCGAATACAAATCTCATCTTCGTGCTCTTCAA
AAGGAGAAGTCTGAGCGGATCCAAAAAGTTGTGGACTGTGTAAATGAGGTGCACTCTTTG
TGTGGTGTGCTGGGGCTGGATTTTGGCAAAACTGTGAGTGATGTGCATCCAAGCTTGCAT
GAAACAAGCCTGGGACAATCCACTAACATTAGCGTCAGCGCATTGGAAAGTCTTGAACAG
GCCATCTTCAGACTGAAGACAGAAAGAAAAGTTCGATATCAGAAGCTAAAAGATGTTGCT
GGATTGTTGTTTGAGCTTTGGACCTTAATGGATACAACCAGAGAAGAAAAGAGTAAGTTA
TCGAGGATCACTTGCGTTCTTCGTCTTTCTGAGGCAGAGGTTACAGAACCAGGTGCTCTT
TCTTTGGAGGTTATTCAACAGATATCGACAGAAGTGGAGAGGCTGACCAAATTGAAAGCA
AGCAGGATGAAGGAGTTGGTCATAAAAAGGAGAGCAGAGCTGGAGGACATATGCAACAAA
AACCATATCGATCCTGATCCAAGTACTTCAGCCGATAAATCTAGTGCAATGATAGACTCT
GGTCTTGTGGACCCTTGTGAACTCCTGGAAAATATTGAAGCACAAATAAACAAAGCAAAG
GATGAAGCTTTAAGTCGAAAAGATATAATGGATAAAATAGACTGGTGGCTTTTTGCTTGT
GAGGAGGAAAACTGGCTTGAAGATTATAACCAGGATTATAGACGTTACAGTGGTGGAAGA
GGTGCTCACATAAACTTAAAGCGGGCTGAGCAAGCTAGAATTAAAGTGACTAAAATTCCA
GTCGTGGTTAACGCTTTGATTAACAAGACACTAGCTTGGGAAGATGAGAAACAGAAATTG
TTTCTTTATGATGGGGTGAGATTGGTGTCAATATTGGAGGATTACAAAGTGGTTAGACAG
CAGAAAGAAGAGTCAAAGAAACGTGCTCGGGATCAGAAGAAACTCCATGATATGCTGCTG
GCAGAGAAGGAATCTGCATATGGTTCCAAACCTAGCCCGAGAAGAAGCAGCAGTTTTAGG
AAGGCAAATGGTTACCATGCCAATGGAAATGGATCTGTTACACCCTCGCCACGCAGGAGC
TCAATGTCTTGTGCAACTCCAGAGCTCTTAACACCCCGTTCCAACTCTGTGCGGCACAAT
GGTTATTTCAAGGAAATGACAAGGCTCTCTACCGGCCCTCTCAACTTTGTGGCTATGGCT
AAAGAAGATACCGTGTCATTCTCTTCTATTTCCGGTTCTGATCCAGAATCTCCACTTCAA
GCTTGA