Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058647
CDS Infomation

pacid=37439359 polypeptide=PGSC0003DMP400039503 locus=PGSC0003DMG400022785 ID=PGSC0003DMT400058647.v4.03 annot-version=v4.03
Sequence

ATGGCGGCGTATGCTGCTGTGAATTCACTTTTGCATACGCTGGATAATCTATCTCAAACT
CATACATCACATTCTCTTCTTTACAAAAAAAAGCAAACTGAAGTCCTCAGTGACAAGTAC
ACCTTCCTTAAAACCTTTCTTGAGGATTTTACTAATATTTTCCATGAAGATGTAAAGATG
AAGCATCTCGAAAGGATAATCCAAGAAGCTGCTAATGGAGTGGAAGATACTATTGACTCA
CATGTATATGATAGCTCTGCCTTAGTACAAAGCAAGCGAGTACGAAGAAAGGCTTATACG
ATCTTTCATCAAAACTTGGAATATGCAATTGAGGAAATTGGTTTGATACAAAAAGAGGTT
ATGAAAAAGATAAAGGTCAACAAGTTCAACAGCAAAATCTCTCATTCAAGAGATACTTCA
TCTCAGATCCCTATGGATCAAAAAGATGTAATCATTGGACTGGATGAAGACTTGCTAAAG
ATAAAAGATCGACTCATCGTGCAATCATCAAGACTCGAAGTTGTCCCCATTATAGGGATG
GGTGGGAGGAAGTATCTTATTGTCCTAGATGATATGTGGTCTATCAAGGCTTGGCAGCAT
GTGAGGAGATCATTTCCAGATGATCGTAATGGAAGTCGAATCGTGTTGACCACAAGGCTT
GTAGATGTTGCATCTTGTGTTTGCTCTGGCAATTCCCTTCACCAGATGCGTTTTCTGAGC
ATGGAGGAAAGCTGGGATCTTTTAAGCGGTAAGGTCTTTGGGAATGGTAGTTACCCTCCG
GACAAAATCTCACATTCAAGAGATACTTCCTCACTGCTCCCTTTGTATCAAAAAGATATA
ATCGTTGGACTGGATGAAGACTTGCTGAAGATAAAAGAACGACTCACCGTGCAATCGTCA
AGACTCGAAGTTGTCCCCATTATAGGGATGGGTGGTATTGGCAAGACCACACTGGCTAGA
AGAGTTTATGATGATTCCTTGATTGCATACCATTTTTATGTCCGAGCATGGGCAAATGTA
TCTCAAGAATTTGACACTAGAGAAATTTTTCTTGGTATTCTTCGCTCCATTGGCATGGTC
AACGATGAAGAAGAAAGAAACAGTACTACTGAGCAATTGGCTGAAAGAGNNNNNNNNNNN
NNNGTCAACGATGAAGTAGAAAGAAACAGTACTAATGAGCAATTGGCTGAAAGAGTTTAT
CGAAGTTTAAAAGGGATGAAGTATCTTATTGTCCTAGATGATATGTGGTCCATCAAGGCT
TGGCAGCATGTGAGGAGATCATTTCCAGATGATCGTAATGGAAGTCGAATCGTGTTGACC
ACAAGGCTTGTAGATGTTGCATCTTGTGTTTGCTCTGGCAATTCCCTTCACCAGATGCGT
TTTCTGAGCATGGAGGAAAGCTGGGATCTTTTAAGCGGTAAGGTCTTTGGGAATGGTAGT
TACCCTCCGGAATTGGAGAAAATTGGGAGGTACATTGGCCATCAGTGTCAAGGGTTGCCA
CTTGCAGTTGTTGCAATTGGTGGACTACTTTCCAAGATGAGCAAGGAAACAAGTTCTTGG
GAGAATGTTGCAGAAAAGGTAGGATCACTTATGACAAGTGACACTATGGATTGCTTGAAC
ATACTTTCTTTGAGCTACAACCACTTGCCTCAGTACTTGAAAACATGCTTCCTTTATATG
GGAGTTTTTGCAGAAACTCGTGAGATCCCGGTCTGGAAGTTAATAAAGTTATGGATTGCT
GAGGGCTTCGTCAAGAAAGTTAATCATAAAAATCTAGAAGATGTGGCAGAGGAAAATTTG
AGGGAGTTGGTTGATAGAAGTTTGGTTTGGTGGGAAGCATACTTCACTAGGAAAAATCAA
GACTTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400039503
PEP Infomation

pacid=37439359 transcript=PGSC0003DMT400058647 locus=PGSC0003DMG400022785 ID=PGSC0003DMT400058647.v4.03 annot-version=v4.03
Sequence

MAAYAAVNSLLHTLDNLSQTHTSHSLLYKKKQTEVLSDKYTFLKTFLEDFTNIFHEDVKM
KHLERIIQEAANGVEDTIDSHVYDSSALVQSKRVRRKAYTIFHQNLEYAIEEIGLIQKEV
MKKIKVNKFNSKISHSRDTSSQIPMDQKDVIIGLDEDLLKIKDRLIVQSSRLEVVPIIGM
GGRKYLIVLDDMWSIKAWQHVRRSFPDDRNGSRIVLTTRLVDVASCVCSGNSLHQMRFLS
MEESWDLLSGKVFGNGSYPPDKISHSRDTSSLLPLYQKDIIVGLDEDLLKIKERLTVQSS
RLEVVPIIGMGGIGKTTLARRVYDDSLIAYHFYVRAWANVSQEFDTREIFLGILRSIGMV
NDEEERNSTTEQLAERVNDEVERNSTNEQLAERVYRSLKGMKYLIVLDDMWSIKAWQHVR
RSFPDDRNGSRIVLTTRLVDVASCVCSGNSLHQMRFLSMEESWDLLSGKVFGNGSYPPEL
EKIGRYIGHQCQGLPLAVVAIGGLLSKMSKETSSWENVAEKVGSLMTSDTMDCLNILSLS
YNHLPQYLKTCFLYMGVFAETREIPVWKLIKLWIAEGFVKKVNHKNLEDVAEENLRELVD
RSLVWWEAYFTRKNQDL*

Transcript Sequence

Transcript ID

PGSC0003DMT400058647
Transcript Infomation

pacid=37439359 locus=PGSC0003DMG400022785 ID=PGSC0003DMT400058647.v4.03 annot-version=v4.03
Sequence

ATGGCGGCGTATGCTGCTGTGAATTCACTTTTGCATACGCTGGATAATCTATCTCAAACT
CATACATCACATTCTCTTCTTTACAAAAAAAAGCAAACTGAAGTCCTCAGTGACAAGTAC
ACCTTCCTTAAAACCTTTCTTGAGGATTTTACTAATATTTTCCATGAAGATGTAAAGATG
AAGCATCTCGAAAGGATAATCCAAGAAGCTGCTAATGGAGTGGAAGATACTATTGACTCA
CATGTATATGATAGCTCTGCCTTAGTACAAAGCAAGCGAGTACGAAGAAAGGCTTATACG
ATCTTTCATCAAAACTTGGAATATGCAATTGAGGAAATTGGTTTGATACAAAAAGAGGTT
ATGAAAAAGATAAAGGTCAACAAGTTCAACAGCAAAATCTCTCATTCAAGAGATACTTCA
TCTCAGATCCCTATGGATCAAAAAGATGTAATCATTGGACTGGATGAAGACTTGCTAAAG
ATAAAAGATCGACTCATCGTGCAATCATCAAGACTCGAAGTTGTCCCCATTATAGGGATG
GGTGGGAGGAAGTATCTTATTGTCCTAGATGATATGTGGTCTATCAAGGCTTGGCAGCAT
GTGAGGAGATCATTTCCAGATGATCGTAATGGAAGTCGAATCGTGTTGACCACAAGGCTT
GTAGATGTTGCATCTTGTGTTTGCTCTGGCAATTCCCTTCACCAGATGCGTTTTCTGAGC
ATGGAGGAAAGCTGGGATCTTTTAAGCGGTAAGGTCTTTGGGAATGGTAGTTACCCTCCG
GACAAAATCTCACATTCAAGAGATACTTCCTCACTGCTCCCTTTGTATCAAAAAGATATA
ATCGTTGGACTGGATGAAGACTTGCTGAAGATAAAAGAACGACTCACCGTGCAATCGTCA
AGACTCGAAGTTGTCCCCATTATAGGGATGGGTGGTATTGGCAAGACCACACTGGCTAGA
AGAGTTTATGATGATTCCTTGATTGCATACCATTTTTATGTCCGAGCATGGGCAAATGTA
TCTCAAGAATTTGACACTAGAGAAATTTTTCTTGGTATTCTTCGCTCCATTGGCATGGTC
AACGATGAAGAAGAAAGAAACAGTACTACTGAGCAATTGGCTGAAAGAGNNNNNNNNNNN
NNNGTCAACGATGAAGTAGAAAGAAACAGTACTAATGAGCAATTGGCTGAAAGAGTTTAT
CGAAGTTTAAAAGGGATGAAGTATCTTATTGTCCTAGATGATATGTGGTCCATCAAGGCT
TGGCAGCATGTGAGGAGATCATTTCCAGATGATCGTAATGGAAGTCGAATCGTGTTGACC
ACAAGGCTTGTAGATGTTGCATCTTGTGTTTGCTCTGGCAATTCCCTTCACCAGATGCGT
TTTCTGAGCATGGAGGAAAGCTGGGATCTTTTAAGCGGTAAGGTCTTTGGGAATGGTAGT
TACCCTCCGGAATTGGAGAAAATTGGGAGGTACATTGGCCATCAGTGTCAAGGGTTGCCA
CTTGCAGTTGTTGCAATTGGTGGACTACTTTCCAAGATGAGCAAGGAAACAAGTTCTTGG
GAGAATGTTGCAGAAAAGGTAGGATCACTTATGACAAGTGACACTATGGATTGCTTGAAC
ATACTTTCTTTGAGCTACAACCACTTGCCTCAGTACTTGAAAACATGCTTCCTTTATATG
GGAGTTTTTGCAGAAACTCGTGAGATCCCGGTCTGGAAGTTAATAAAGTTATGGATTGCT
GAGGGCTTCGTCAAGAAAGTTAATCATAAAAATCTAGAAGATGTGGCAGAGGAAAATTTG
AGGGAGTTGGTTGATAGAAGTTTGGTTTGGTGGGAAGCATACTTCACTAGGAAAAATCAA
GACTTGTAA