Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058638
CDS Infomation

pacid=37435410 polypeptide=PGSC0003DMP400039499 locus=PGSC0003DMG400022782 ID=PGSC0003DMT400058638.v4.03 annot-version=v4.03
Sequence

ATGGCAACATTGTCACATTTTTGTGGGGTTAAAACTCCCTACCCTTCTGTACTCAAAAGA
AGCGTGCATTTCCCACAACTTGATTTTGTGGGTACTGTCCCCTTTGTTTCTACGCCAAGT
AAATCTGTGAAGGCTTCTTGTTGTGAAAGAGTGCAGAGACTGGTATGTAAAGCACAAGCA
GCTGATGTTAATCCTAAAGAGACCAAGAATGAATCTTTTGGTGAGGTTCCTGATGAATTG
ACCTGTGTTATGAAGTTTGGTGGCTCATCAGTAGCCTCAGCCGAAAGAATGAGGGAAGTA
GCTGATCTTATTCTTAGCTTTCCAGAAGAGAGACCTGTTATTGTTCTCTCTGCAATGGGA
AAGACAACAAACAACCTTTTGCTGGCTGGTGAAAAGGCTCAGAGTTGTGGTGTTTCCAAT
GTTTCTGATCTGCAAGAGCTGGATTTTATAAAGGAGCTCCATCTTAGGACAATAGACGAA
CTTGGAGTAGAGAGTTCTACCATTTCAAAGCATCTACTCGAACTGGAACAACTTTTGAAT
GGAATTGCTTTGATGAAAGAGTTGACTCCACGAGCAAGGGACTACTTGGTGTCCTTTGGA
GAGTGTATGTCCACAAGAATATTTACCGCATATCTGAATAAACTTGGTGTCAAATCCCGC
CAATATGATGCATTTGAGATGGGTATTATAACTACTGATGATTTCACTAATGCGGATATA
TTGGAAGCAACTTATCCTGCTGTTGCAAAGAGATTAACTGGTGATTGGATGAGTAGTCCT
GCAATCCCTATTGTCACTGGGTTTCTTGGGAAGGGTTGGAGGACTTGTGCTGTGACTACA
CTAGGTAGGGGTGGTAGTGACTTGACTGCTACAACAATCGGTAAAGCATTGGGATTACGT
GAAATTCAGGTCTGGAAGGATGTTGACGGTGTTTTGACATGTGATCCCAACATATATCCA
CGTGCTGAGACTGTGCCATATCTAACTTTTGATGAGGCAGCTGAACTTGCATACTTCGGC
GCACAGGTCCTTCATCCACAGTCAATGAGGCCTGCTAGAGAGGGTGATATTCCTGTTAGG
GTTAAAAACTCGTATAATCCTAAAGCTCCTGGTACTCTCATCGTTAAAACAAGAGATATG
AGTAAGGCGGTACTTACAAGTATCGTTCTTAAACGAAATGTAACCATGTTGGATATCGCA
AGTACCCGTATGCTTGGTCAATTTGGCTTCCTTGCAAAGGTTTTCTCCATCTTTGAAGAC
TTGGGGATATCTGTTGATGTCGTTGCGACAAGTGAAGTTAGTATTTCCTTGACATTGGAC
CCATCAAAACTTTGGAGCAGAGAACTAATTCAACAGGAGCTTGATAACGTTGTAGAAGAA
CTTGAGAAAATTGCAGTTGTGAAGCTACTTCAAAACAGATCAATCATCTCTCTGATTGGG
AACGTCCAGAGGTCCTCGTTGATTTTAGAAAAGGCTTTCCACGTTATGCATACCAATGGT
GTCAACGTTCAGATGATCTCTCAAGGTGCATCCAAGGTTAATATCTCATTGATAGTAAAT
GACAGTGAAGCGGAACAATGTGTAAGGGCTCTCCACCATTCCTTCTTCGAGAGTGATCTT
TCTGAACTAGTCTGGGAAAGTCCATCTGGAAATGGCTATGCTGCTACTACTACTACTACT
CCCTTGTCCACGCTGTCCAATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400039499
PEP Infomation

pacid=37435410 transcript=PGSC0003DMT400058638 locus=PGSC0003DMG400022782 ID=PGSC0003DMT400058638.v4.03 annot-version=v4.03
Sequence

MATLSHFCGVKTPYPSVLKRSVHFPQLDFVGTVPFVSTPSKSVKASCCERVQRLVCKAQA
ADVNPKETKNESFGEVPDELTCVMKFGGSSVASAERMREVADLILSFPEERPVIVLSAMG
KTTNNLLLAGEKAQSCGVSNVSDLQELDFIKELHLRTIDELGVESSTISKHLLELEQLLN
GIALMKELTPRARDYLVSFGECMSTRIFTAYLNKLGVKSRQYDAFEMGIITTDDFTNADI
LEATYPAVAKRLTGDWMSSPAIPIVTGFLGKGWRTCAVTTLGRGGSDLTATTIGKALGLR
EIQVWKDVDGVLTCDPNIYPRAETVPYLTFDEAAELAYFGAQVLHPQSMRPAREGDIPVR
VKNSYNPKAPGTLIVKTRDMSKAVLTSIVLKRNVTMLDIASTRMLGQFGFLAKVFSIFED
LGISVDVVATSEVSISLTLDPSKLWSRELIQQELDNVVEELEKIAVVKLLQNRSIISLIG
NVQRSSLILEKAFHVMHTNGVNVQMISQGASKVNISLIVNDSEAEQCVRALHHSFFESDL
SELVWESPSGNGYAATTTTTPLSTLSN*

Transcript Sequence

Transcript ID

PGSC0003DMT400058638
Transcript Infomation

pacid=37435410 locus=PGSC0003DMG400022782 ID=PGSC0003DMT400058638.v4.03 annot-version=v4.03
Sequence

ATGGCAACATTGTCACATTTTTGTGGGGTTAAAACTCCCTACCCTTCTGTACTCAAAAGA
AGCGTGCATTTCCCACAACTTGATTTTGTGGGTACTGTCCCCTTTGTTTCTACGCCAAGT
AAATCTGTGAAGGCTTCTTGTTGTGAAAGAGTGCAGAGACTGGTATGTAAAGCACAAGCA
GCTGATGTTAATCCTAAAGAGACCAAGAATGAATCTTTTGGTGAGGTTCCTGATGAATTG
ACCTGTGTTATGAAGTTTGGTGGCTCATCAGTAGCCTCAGCCGAAAGAATGAGGGAAGTA
GCTGATCTTATTCTTAGCTTTCCAGAAGAGAGACCTGTTATTGTTCTCTCTGCAATGGGA
AAGACAACAAACAACCTTTTGCTGGCTGGTGAAAAGGCTCAGAGTTGTGGTGTTTCCAAT
GTTTCTGATCTGCAAGAGCTGGATTTTATAAAGGAGCTCCATCTTAGGACAATAGACGAA
CTTGGAGTAGAGAGTTCTACCATTTCAAAGCATCTACTCGAACTGGAACAACTTTTGAAT
GGAATTGCTTTGATGAAAGAGTTGACTCCACGAGCAAGGGACTACTTGGTGTCCTTTGGA
GAGTGTATGTCCACAAGAATATTTACCGCATATCTGAATAAACTTGGTGTCAAATCCCGC
CAATATGATGCATTTGAGATGGGTATTATAACTACTGATGATTTCACTAATGCGGATATA
TTGGAAGCAACTTATCCTGCTGTTGCAAAGAGATTAACTGGTGATTGGATGAGTAGTCCT
GCAATCCCTATTGTCACTGGGTTTCTTGGGAAGGGTTGGAGGACTTGTGCTGTGACTACA
CTAGGTAGGGGTGGTAGTGACTTGACTGCTACAACAATCGGTAAAGCATTGGGATTACGT
GAAATTCAGGTCTGGAAGGATGTTGACGGTGTTTTGACATGTGATCCCAACATATATCCA
CGTGCTGAGACTGTGCCATATCTAACTTTTGATGAGGCAGCTGAACTTGCATACTTCGGC
GCACAGGTCCTTCATCCACAGTCAATGAGGCCTGCTAGAGAGGGTGATATTCCTGTTAGG
GTTAAAAACTCGTATAATCCTAAAGCTCCTGGTACTCTCATCGTTAAAACAAGAGATATG
AGTAAGGCGGTACTTACAAGTATCGTTCTTAAACGAAATGTAACCATGTTGGATATCGCA
AGTACCCGTATGCTTGGTCAATTTGGCTTCCTTGCAAAGGTTTTCTCCATCTTTGAAGAC
TTGGGGATATCTGTTGATGTCGTTGCGACAAGTGAAGTTAGTATTTCCTTGACATTGGAC
CCATCAAAACTTTGGAGCAGAGAACTAATTCAACAGGAGCTTGATAACGTTGTAGAAGAA
CTTGAGAAAATTGCAGTTGTGAAGCTACTTCAAAACAGATCAATCATCTCTCTGATTGGG
AACGTCCAGAGGTCCTCGTTGATTTTAGAAAAGGCTTTCCACGTTATGCATACCAATGGT
GTCAACGTTCAGATGATCTCTCAAGGTGCATCCAAGGTTAATATCTCATTGATAGTAAAT
GACAGTGAAGCGGAACAATGTGTAAGGGCTCTCCACCATTCCTTCTTCGAGAGTGATCTT
TCTGAACTAGTCTGGGAAAGTCCATCTGGAAATGGCTATGCTGCTACTACTACTACTACT
CCCTTGTCCACGCTGTCCAATTAA