Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058621
CDS Infomation

pacid=37439080 polypeptide=PGSC0003DMP400039486 locus=PGSC0003DMG400022775 ID=PGSC0003DMT400058621.v4.03 annot-version=v4.03
Sequence

ATGATTGCAACATGGAGAAAAAAGAGAACAGAGAAAAGGGTAATAAAGAGAGGATTTATG
AAGAAAACAATCATGGAGTTAGTGATACCAAGCCAATTTACATGTCCAATTTCATTAGAT
TTAATGAAAGATCCAGTGACTTTATCAACAGGGATTACGTATGATCGAGAAAACATCGAA
AAATGGATTAATGAAGGTGGGAATCAAACATGTCCTATCACAAATCAAGACTTGAAGTCA
TATGGAAGTGGCATTACTACTATTGATCCTGTTTTAATTCCAAATCACAACATTCGAAAA
ATGATTCAACAATGGTGTGTTGAAAATAAGGAACATGGGATTGATAGGATTCCAACTCCA
AGAATCCCCGTTTCATCGTCTGATGTCTCTGAATTACTCGCGAAAATAACTAATTCGAGT
AAGTTAGAGATGCAAGACTCAAGATTATGCGAAGAATTAGTCACTAGAGTGAAGAATTTA
GCTAGTGAAAGTGATCGAAACAAATGTTGTTTCATCACTAATGGCATAGGAAAGGTGTTA
TCATCAGCATTTCTTGAACTATCAAAGGGAAAAAACGCGAAAAATGCTTCAACAGAGGAA
GTGATCTTGTCAACCTTGACACTTTTTTTGCCTTTGGATGTTAAGTCCAAGACAATTCTT
GGGTCGATTTCATCGTTACGTTGCATAGCATGGTTCTTGAAGAATGGGAGTTTATCAAGT
AGGAGGAATGCAGTTCTTGTCCTTAGAGAAATTATGAAATTGGAAGAAAAAGAAAAGGTT
GAAATCTTGTTGAATATTGAAGGTGCTTTAGAAGGGCTAGTGAAGTTAGTAAAAGAGCCA
ATTTGTCCTAATACTACAAAAGCTTCTTTATTAACAATTTATCATATGGTTAATAATTCA
TCATCACAATCATCAAGATCAAGATTTGTTGATGTGGGGTTAGTTGAATTGTTGATAGAA
ATACTTGTGGATTGTGACAAAAGCATATGTGAAAAGGCATTAGGTGTTTTGGATGGGATT
TTGAGCTATGAAGAAGGGGTGAAAAGGGCTTATAATTATGCACTTAGTGTGCCTGTTTTG
GTGAAGAAATTGTTGAGAGTTTCAGATTTGGCTACTGAATTTTCAGTTTCAATTTTATGG
AAGATATGCAAGAATGAAAATAATGGAGATTGTGGTGTTCTTGTTGAAGCACTTCAAGTT
GGTGCATTTCAAAAGCTTTTGTTGATGCTACAAGTTGGTTGTAGTGAAATAACAAAAGAG
AAAGCTAGTGAATTGTTGAAGTTGTTGAATGTGCATAGAGATAGAGCAGAGTGTGTTGAT
TCTTTGGACTTCAAGAGTCTCAAAAGGACATTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400039486
PEP Infomation

pacid=37439080 transcript=PGSC0003DMT400058621 locus=PGSC0003DMG400022775 ID=PGSC0003DMT400058621.v4.03 annot-version=v4.03
Sequence

MIATWRKKRTEKRVIKRGFMKKTIMELVIPSQFTCPISLDLMKDPVTLSTGITYDRENIE
KWINEGGNQTCPITNQDLKSYGSGITTIDPVLIPNHNIRKMIQQWCVENKEHGIDRIPTP
RIPVSSSDVSELLAKITNSSKLEMQDSRLCEELVTRVKNLASESDRNKCCFITNGIGKVL
SSAFLELSKGKNAKNASTEEVILSTLTLFLPLDVKSKTILGSISSLRCIAWFLKNGSLSS
RRNAVLVLREIMKLEEKEKVEILLNIEGALEGLVKLVKEPICPNTTKASLLTIYHMVNNS
SSQSSRSRFVDVGLVELLIEILVDCDKSICEKALGVLDGILSYEEGVKRAYNYALSVPVL
VKKLLRVSDLATEFSVSILWKICKNENNGDCGVLVEALQVGAFQKLLLMLQVGCSEITKE
KASELLKLLNVHRDRAECVDSLDFKSLKRTF*

Transcript Sequence

Transcript ID

PGSC0003DMT400058621
Transcript Infomation

pacid=37439080 locus=PGSC0003DMG400022775 ID=PGSC0003DMT400058621.v4.03 annot-version=v4.03
Sequence

ATGATTGCAACATGGAGAAAAAAGAGAACAGAGAAAAGGGTAATAAAGAGAGGATTTATG
AAGAAAACAATCATGGAGTTAGTGATACCAAGCCAATTTACATGTCCAATTTCATTAGAT
TTAATGAAAGATCCAGTGACTTTATCAACAGGGATTACGTATGATCGAGAAAACATCGAA
AAATGGATTAATGAAGGTGGGAATCAAACATGTCCTATCACAAATCAAGACTTGAAGTCA
TATGGAAGTGGCATTACTACTATTGATCCTGTTTTAATTCCAAATCACAACATTCGAAAA
ATGATTCAACAATGGTGTGTTGAAAATAAGGAACATGGGATTGATAGGATTCCAACTCCA
AGAATCCCCGTTTCATCGTCTGATGTCTCTGAATTACTCGCGAAAATAACTAATTCGAGT
AAGTTAGAGATGCAAGACTCAAGATTATGCGAAGAATTAGTCACTAGAGTGAAGAATTTA
GCTAGTGAAAGTGATCGAAACAAATGTTGTTTCATCACTAATGGCATAGGAAAGGTGTTA
TCATCAGCATTTCTTGAACTATCAAAGGGAAAAAACGCGAAAAATGCTTCAACAGAGGAA
GTGATCTTGTCAACCTTGACACTTTTTTTGCCTTTGGATGTTAAGTCCAAGACAATTCTT
GGGTCGATTTCATCGTTACGTTGCATAGCATGGTTCTTGAAGAATGGGAGTTTATCAAGT
AGGAGGAATGCAGTTCTTGTCCTTAGAGAAATTATGAAATTGGAAGAAAAAGAAAAGGTT
GAAATCTTGTTGAATATTGAAGGTGCTTTAGAAGGGCTAGTGAAGTTAGTAAAAGAGCCA
ATTTGTCCTAATACTACAAAAGCTTCTTTATTAACAATTTATCATATGGTTAATAATTCA
TCATCACAATCATCAAGATCAAGATTTGTTGATGTGGGGTTAGTTGAATTGTTGATAGAA
ATACTTGTGGATTGTGACAAAAGCATATGTGAAAAGGCATTAGGTGTTTTGGATGGGATT
TTGAGCTATGAAGAAGGGGTGAAAAGGGCTTATAATTATGCACTTAGTGTGCCTGTTTTG
GTGAAGAAATTGTTGAGAGTTTCAGATTTGGCTACTGAATTTTCAGTTTCAATTTTATGG
AAGATATGCAAGAATGAAAATAATGGAGATTGTGGTGTTCTTGTTGAAGCACTTCAAGTT
GGTGCATTTCAAAAGCTTTTGTTGATGCTACAAGTTGGTTGTAGTGAAATAACAAAAGAG
AAAGCTAGTGAATTGTTGAAGTTGTTGAATGTGCATAGAGATAGAGCAGAGTGTGTTGAT
TCTTTGGACTTCAAGAGTCTCAAAAGGACATTTTGA