Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058602
CDS Infomation

pacid=37437317 polypeptide=PGSC0003DMP400039472 locus=PGSC0003DMG400022766 ID=PGSC0003DMT400058602.v4.03 annot-version=v4.03
Sequence

ATGTTCAACTCCAGAAATTCTCAAGATTTGGCTGTGTTGGAAGGAAGTGTTGTTGGTCTC
GAGAAAGATACTGATCGAGATGGATTTGTTCTGGTACGAGTCCCCAATTTACGGAGCCCT
CTTAGGGTAAATGCATCAACCATAGAGAGGGTTACATGTGGTTTGGCAACTGGGGATTGG
GTGCGCTTGGTCAATGAAAGTAAGAATCACTTCTCTGTGGGTATCTTACACTCCGTGCAG
CGTGATGGAAGCATCACTGTTGGTATTTTAGGCTTGGAAACATTATGGAGAGGACATTCT
TCTGAAGTCGAAAAAGTTGACCCATATTTACTGGGACAATTCGTGCAATTGAAATCAAAT
GTTGAAACTCCCCGGTTTGAATGGCCTAAGAAATGGGGAGGAGGATGGGCTACTGGGAGA
ATATCACAGATACTTCCAAATGGTTGTCTTGTCGTTCAATTTCCAGGGAGGTTGGTATTC
GGTGATGAACCTAACACTTTCTTGGCTGATCCAGATGAGATGATCGAAGTATCATTTGAT
ACATGTCCTGGCATTATCAAAAAGTATCAGCACCTCGAGGATTTTCACTGGTGTATTCGA
CCACTTTCTATTGTGTTTAGCCTACTTACAGCAGCAAAGCTTGGTGTATCTGTAGGAAAG
TGCATTAATGCGAAGCTGAAGAAGGACTCGAAGGATCATCGTACTAAGGATGGTGAGGTT
GGTGGCAAGCCAGCCTGGCTTCGGCCAAATATCCTGTTTAAAGAAGGTGCTGCTACTGCT
AGGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400039472
PEP Infomation

pacid=37437317 transcript=PGSC0003DMT400058602 locus=PGSC0003DMG400022766 ID=PGSC0003DMT400058602.v4.03 annot-version=v4.03
Sequence

MFNSRNSQDLAVLEGSVVGLEKDTDRDGFVLVRVPNLRSPLRVNASTIERVTCGLATGDW
VRLVNESKNHFSVGILHSVQRDGSITVGILGLETLWRGHSSEVEKVDPYLLGQFVQLKSN
VETPRFEWPKKWGGGWATGRISQILPNGCLVVQFPGRLVFGDEPNTFLADPDEMIEVSFD
TCPGIIKKYQHLEDFHWCIRPLSIVFSLLTAAKLGVSVGKCINAKLKKDSKDHRTKDGEV
GGKPAWLRPNILFKEGAATAR*

Transcript Sequence

Transcript ID

PGSC0003DMT400058602
Transcript Infomation

pacid=37437317 locus=PGSC0003DMG400022766 ID=PGSC0003DMT400058602.v4.03 annot-version=v4.03
Sequence

ATGTTCAACTCCAGAAATTCTCAAGATTTGGCTGTGTTGGAAGGAAGTGTTGTTGGTCTC
GAGAAAGATACTGATCGAGATGGATTTGTTCTGGTACGAGTCCCCAATTTACGGAGCCCT
CTTAGGGTAAATGCATCAACCATAGAGAGGGTTACATGTGGTTTGGCAACTGGGGATTGG
GTGCGCTTGGTCAATGAAAGTAAGAATCACTTCTCTGTGGGTATCTTACACTCCGTGCAG
CGTGATGGAAGCATCACTGTTGGTATTTTAGGCTTGGAAACATTATGGAGAGGACATTCT
TCTGAAGTCGAAAAAGTTGACCCATATTTACTGGGACAATTCGTGCAATTGAAATCAAAT
GTTGAAACTCCCCGGTTTGAATGGCCTAAGAAATGGGGAGGAGGATGGGCTACTGGGAGA
ATATCACAGATACTTCCAAATGGTTGTCTTGTCGTTCAATTTCCAGGGAGGTTGGTATTC
GGTGATGAACCTAACACTTTCTTGGCTGATCCAGATGAGATGATCGAAGTATCATTTGAT
ACATGTCCTGGCATTATCAAAAAGTATCAGCACCTCGAGGATTTTCACTGGTGTATTCGA
CCACTTTCTATTGTGTTTAGCCTACTTACAGCAGCAAAGCTTGGTGTATCTGTAGGAAAG
TGCATTAATGCGAAGCTGAAGAAGGACTCGAAGGATCATCGTACTAAGGATGGTGAGGTT
GGTGGCAAGCCAGCCTGGCTTCGGCCAAATATCCTGTTTAAAGAAGGTGCTGCTACTGCT
AGGTAA