Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058588
CDS Infomation

pacid=37471367 polypeptide=PGSC0003DMP400039460 locus=PGSC0003DMG400022760 ID=PGSC0003DMT400058588.v4.03 annot-version=v4.03
Sequence

ATGAGCAAAGAATTGTTGAGAATGAAAACTAAAAAGCCAAATGGGAATGGACTTTCATCT
TCAGGATGGGAAATGAGGCCAGGAGGAATGTTAGTACAAAAGAGAAGTTCTGATCATAAT
TCAAATCAAAGTTCAAATATTGTTGTTCCAATTATTAGACTCAAAGTCAAATATGGTTCA
TCTTATCATGAAGTCAAAATTAGCTCACAAGCAACTTTTGGGGAGTTGAAGAAAATGCTG
GCAGGGCCAACTGGATTACATACTGAAGATCAGAAAATATTTTACAAGGAAAAAGAAAAA
GATTCAAGAAATTTTCTTGATGTTTCTGGTATAAAAGATGGATCAAAACTTGTACTAATT
GAAGATGAAATAAGCAAAGAAAAAAGGTATCTTGAATCAAGAAGAAATGCAAAAATGGAA
AATGCATCAAAAGATATCACATCAATTAGACTTGAAATTGATAAACTAGCTAAACAGGTT
GCAAATGTTGAAATGGACATTTATGGTGGGAAAAAAGTAACAGAGACTTTGTTATTGAGT
TTGATTGAATTGTTAATGACACAATTGATTAAGTTGGATGGAATTACTGCTGATGGTGAT
CTCAAATTACAGAGAAGAATGCAGGTGAAAAGGGTGCAAAAATACATAGAGACTCTAGAC
ATGTTGAAAATAAGAAATTCAGCACTTGGAAATGACAATGCCAAAGTGTCAATGAACCAC
AAAAACAGAATATTCACAGGACAAATGCCAAAATCAATTTATTATCAACAAGAACAAAGG
AAGATGGGAAATTTTGCTGATGAGAGAAGCCCAGGGCCAGTCGTGGTGACAACAAAATGG
GAAACTTTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400039460
PEP Infomation

pacid=37471367 transcript=PGSC0003DMT400058588 locus=PGSC0003DMG400022760 ID=PGSC0003DMT400058588.v4.03 annot-version=v4.03
Sequence

MSKELLRMKTKKPNGNGLSSSGWEMRPGGMLVQKRSSDHNSNQSSNIVVPIIRLKVKYGS
SYHEVKISSQATFGELKKMLAGPTGLHTEDQKIFYKEKEKDSRNFLDVSGIKDGSKLVLI
EDEISKEKRYLESRRNAKMENASKDITSIRLEIDKLAKQVANVEMDIYGGKKVTETLLLS
LIELLMTQLIKLDGITADGDLKLQRRMQVKRVQKYIETLDMLKIRNSALGNDNAKVSMNH
KNRIFTGQMPKSIYYQQEQRKMGNFADERSPGPVVVTTKWETF*

Transcript Sequence

Transcript ID

PGSC0003DMT400058588
Transcript Infomation

pacid=37471367 locus=PGSC0003DMG400022760 ID=PGSC0003DMT400058588.v4.03 annot-version=v4.03
Sequence

ATGAGCAAAGAATTGTTGAGAATGAAAACTAAAAAGCCAAATGGGAATGGACTTTCATCT
TCAGGATGGGAAATGAGGCCAGGAGGAATGTTAGTACAAAAGAGAAGTTCTGATCATAAT
TCAAATCAAAGTTCAAATATTGTTGTTCCAATTATTAGACTCAAAGTCAAATATGGTTCA
TCTTATCATGAAGTCAAAATTAGCTCACAAGCAACTTTTGGGGAGTTGAAGAAAATGCTG
GCAGGGCCAACTGGATTACATACTGAAGATCAGAAAATATTTTACAAGGAAAAAGAAAAA
GATTCAAGAAATTTTCTTGATGTTTCTGGTATAAAAGATGGATCAAAACTTGTACTAATT
GAAGATGAAATAAGCAAAGAAAAAAGGTATCTTGAATCAAGAAGAAATGCAAAAATGGAA
AATGCATCAAAAGATATCACATCAATTAGACTTGAAATTGATAAACTAGCTAAACAGGTT
GCAAATGTTGAAATGGACATTTATGGTGGGAAAAAAGTAACAGAGACTTTGTTATTGAGT
TTGATTGAATTGTTAATGACACAATTGATTAAGTTGGATGGAATTACTGCTGATGGTGAT
CTCAAATTACAGAGAAGAATGCAGGTGAAAAGGGTGCAAAAATACATAGAGACTCTAGAC
ATGTTGAAAATAAGAAATTCAGCACTTGGAAATGACAATGCCAAAGTGTCAATGAACCAC
AAAAACAGAATATTCACAGGACAAATGCCAAAATCAATTTATTATCAACAAGAACAAAGG
AAGATGGGAAATTTTGCTGATGAGAGAAGCCCAGGGCCAGTCGTGGTGACAACAAAATGG
GAAACTTTCTAA