Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058566
CDS Infomation

pacid=37471163 polypeptide=PGSC0003DMP400039442 locus=PGSC0003DMG401022752 ID=PGSC0003DMT400058566.v4.03 annot-version=v4.03
Sequence

ATGAAGTTTGATTTGATTATTACTGCTCTTCTTGGAATTTTCCTCTTTCATGGATTTTGT
TCTTCTGAAAAAGCTCCAAATTACTCATTTATGCGCCAAGCTACTACAGCACCGGAGATA
TCACATTACGACTACATAATCATCGGCGGCGGCACCGCCGGCTGCCCATTAGCCGCCACG
CTCTCTCAGAAGTACCACGTACTTCTACTAGAGCGCGGCGGTTCGCCTTACGGAAATCCT
AATATCACATATTTATCGACATTCGGATCTGCACTTTCCGATCTCTCACCGAAATCGCCA
TCTCAGCGATTCATTTCCGAGGACGGTGTAATCAACGCGCGTGCACGCGTTTTGGGCGGC
GGAAGTTGTTTAAACGCCGGATTTTACTCACGTGCCGGCCCGAAGTATGTGAGCAGTGTT
GGATGGGACGGAAAGCTGGTGAACGAATCGTATGTTTGGGTGGAAAATAAAGTGGCGTTT
CAGCCGCCGGTGAGACAGTGGCAATCCGCCGTGCGCGACGGTCTTGTGGAGTCAGGGGTG
GTGCCGTACAATGGATTTACGTATGATCATATTAATGGAACTAAAATTGGGGGCACGATT
TTCGATGCCGCCGGACGTCGGCACACGGCTGCCGATCTACTTGAGTATGCTAACCCTAGT
GGAATCACTCTACTTTTGCATGCTACCGTTCACAAAATCATGTTCAAAACTAGAGGATTA
TCAAGACCAAAAGCTCATGGTGTAATATTTAGAGATGCATTAGGAAAAAAACACAAAGCA
TATTTAAGAAGAGGAGAAATGAATGAAGTAATAGTTTCATCTGGGGCACTTGGAAGCCCA
CAAATGTTAATGTTAAGTGGTGTAGGCCCATCAGAACATTTAAAGGCCCATAACATTACA
GTTGTATTGGACCAGCCCAATGTTGGACAAAGGATGATGGATAACCCAATGAATGCAATA
TTTGTGCCATCACCTGTACCTGTTGAAGTTTCTCTTATACAAGTTGTGGGTATTACAAGA
TTTGGAAGTTATATTGAAGCTGCCTCCGGCGAGAATTTCTCCGGTTATCGTAGTAGTCGG
AGTGATTATGGAATGTTCTCCCCGAAGATTGGACAGCTATCAACAGTGCCACCAAAGCAA
AGAACACCAGAAGCCTTAGAAAAGGCTATAAATTCAATGAATGCACTAGATGCAGCAGCA
TTTAGAGGAGGATTCATATTAGAAAAAATAATGGGCCCAATATCCACTGGACATTTGGAG
CTCCGAACCCGGAACCCGAATGACAACCCATCAATAACATTTAATTACTTCAAAGAGCCA
GAAGATTTACAAAGATGTGTAAATGGACTCAAAGTTATAGAAAATATAATTGAGTCCAAA
TCTTTTTCACAATTCAGATATGACTCAATTTCATTGCCAGCATTACTTAATTTGACTGCA
AGTGCCCCTGTCAATTTATTGCCTAAACATGACAATATTTCAGTCTCATTGGAACAATTT
TGTAAAGATACTGTTATGACAATTTGGCATTATCATGGAGGCTGTCAAGTTGGTAATGTT
GTTGATCAAGATTATAAGGTTATTGGTGTTGATAATTTGAGGGTTATTGATGGTTCAACT
TTTAATTATTCTCCTGGTACTAATCCTCAAGCCACTGTCATGATGCTTGGAAGGTATATG
GGAGTAAGGATAGTGAATGAGAGACTTGCTAAAGAGGAGTCAAATCATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400039442
PEP Infomation

pacid=37471163 transcript=PGSC0003DMT400058566 locus=PGSC0003DMG401022752 ID=PGSC0003DMT400058566.v4.03 annot-version=v4.03
Sequence

MKFDLIITALLGIFLFHGFCSSEKAPNYSFMRQATTAPEISHYDYIIIGGGTAGCPLAAT
LSQKYHVLLLERGGSPYGNPNITYLSTFGSALSDLSPKSPSQRFISEDGVINARARVLGG
GSCLNAGFYSRAGPKYVSSVGWDGKLVNESYVWVENKVAFQPPVRQWQSAVRDGLVESGV
VPYNGFTYDHINGTKIGGTIFDAAGRRHTAADLLEYANPSGITLLLHATVHKIMFKTRGL
SRPKAHGVIFRDALGKKHKAYLRRGEMNEVIVSSGALGSPQMLMLSGVGPSEHLKAHNIT
VVLDQPNVGQRMMDNPMNAIFVPSPVPVEVSLIQVVGITRFGSYIEAASGENFSGYRSSR
SDYGMFSPKIGQLSTVPPKQRTPEALEKAINSMNALDAAAFRGGFILEKIMGPISTGHLE
LRTRNPNDNPSITFNYFKEPEDLQRCVNGLKVIENIIESKSFSQFRYDSISLPALLNLTA
SAPVNLLPKHDNISVSLEQFCKDTVMTIWHYHGGCQVGNVVDQDYKVIGVDNLRVIDGST
FNYSPGTNPQATVMMLGRYMGVRIVNERLAKEESNH*

Transcript Sequence

Transcript ID

PGSC0003DMT400058566
Transcript Infomation

pacid=37471163 locus=PGSC0003DMG401022752 ID=PGSC0003DMT400058566.v4.03 annot-version=v4.03
Sequence

ATGAAGTTTGATTTGATTATTACTGCTCTTCTTGGAATTTTCCTCTTTCATGGATTTTGT
TCTTCTGAAAAAGCTCCAAATTACTCATTTATGCGCCAAGCTACTACAGCACCGGAGATA
TCACATTACGACTACATAATCATCGGCGGCGGCACCGCCGGCTGCCCATTAGCCGCCACG
CTCTCTCAGAAGTACCACGTACTTCTACTAGAGCGCGGCGGTTCGCCTTACGGAAATCCT
AATATCACATATTTATCGACATTCGGATCTGCACTTTCCGATCTCTCACCGAAATCGCCA
TCTCAGCGATTCATTTCCGAGGACGGTGTAATCAACGCGCGTGCACGCGTTTTGGGCGGC
GGAAGTTGTTTAAACGCCGGATTTTACTCACGTGCCGGCCCGAAGTATGTGAGCAGTGTT
GGATGGGACGGAAAGCTGGTGAACGAATCGTATGTTTGGGTGGAAAATAAAGTGGCGTTT
CAGCCGCCGGTGAGACAGTGGCAATCCGCCGTGCGCGACGGTCTTGTGGAGTCAGGGGTG
GTGCCGTACAATGGATTTACGTATGATCATATTAATGGAACTAAAATTGGGGGCACGATT
TTCGATGCCGCCGGACGTCGGCACACGGCTGCCGATCTACTTGAGTATGCTAACCCTAGT
GGAATCACTCTACTTTTGCATGCTACCGTTCACAAAATCATGTTCAAAACTAGAGGATTA
TCAAGACCAAAAGCTCATGGTGTAATATTTAGAGATGCATTAGGAAAAAAACACAAAGCA
TATTTAAGAAGAGGAGAAATGAATGAAGTAATAGTTTCATCTGGGGCACTTGGAAGCCCA
CAAATGTTAATGTTAAGTGGTGTAGGCCCATCAGAACATTTAAAGGCCCATAACATTACA
GTTGTATTGGACCAGCCCAATGTTGGACAAAGGATGATGGATAACCCAATGAATGCAATA
TTTGTGCCATCACCTGTACCTGTTGAAGTTTCTCTTATACAAGTTGTGGGTATTACAAGA
TTTGGAAGTTATATTGAAGCTGCCTCCGGCGAGAATTTCTCCGGTTATCGTAGTAGTCGG
AGTGATTATGGAATGTTCTCCCCGAAGATTGGACAGCTATCAACAGTGCCACCAAAGCAA
AGAACACCAGAAGCCTTAGAAAAGGCTATAAATTCAATGAATGCACTAGATGCAGCAGCA
TTTAGAGGAGGATTCATATTAGAAAAAATAATGGGCCCAATATCCACTGGACATTTGGAG
CTCCGAACCCGGAACCCGAATGACAACCCATCAATAACATTTAATTACTTCAAAGAGCCA
GAAGATTTACAAAGATGTGTAAATGGACTCAAAGTTATAGAAAATATAATTGAGTCCAAA
TCTTTTTCACAATTCAGATATGACTCAATTTCATTGCCAGCATTACTTAATTTGACTGCA
AGTGCCCCTGTCAATTTATTGCCTAAACATGACAATATTTCAGTCTCATTGGAACAATTT
TGTAAAGATACTGTTATGACAATTTGGCATTATCATGGAGGCTGTCAAGTTGGTAATGTT
GTTGATCAAGATTATAAGGTTATTGGTGTTGATAATTTGAGGGTTATTGATGGTTCAACT
TTTAATTATTCTCCTGGTACTAATCCTCAAGCCACTGTCATGATGCTTGGAAGGTATATG
GGAGTAAGGATAGTGAATGAGAGACTTGCTAAAGAGGAGTCAAATCATTAA