Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058565
CDS Infomation

pacid=37470829 polypeptide=PGSC0003DMP400039441 locus=PGSC0003DMG400022751 ID=PGSC0003DMT400058565.v4.03 annot-version=v4.03
Sequence

ATGCAATCACCTTGTTTCAACTGTATTTGCTGCCAGAATTCCCATGGAGATAAAAACCCC
ACCTCTAAAATCAGCATAATCATCACTTGTCATCGCGAATTCATCGATGCAGTAGCTTCA
TCCATCCAGCCAAATTCCCAATTCACTAACCATGAGTGTTTGCCTTCTTGTGCAGAACTA
TTTGCCAACTTACAAGAAGCGTATCCACATTACAGTCAGACTAATCTTGCTGATGAAATT
CGAGCTAACGAATACTATCACCTCACTCTTTCGAAACATGTTTGTTTTGATTACATTGGA
AATGGCCTTTTTTCTTACTACCAACAACAGAACATGATCAAATCTCATCCAATTCACGAT
TCAATCGCCTCTTCATCATCAGCTCCACCTCCTCCTCCTCCTCCTCCTACTCACAACGAA
CCTTTCTTTAACATTTCGTATAAGTCAGTGAGTTTAACTACTCAATTGCTCTACGGAGGG
CAAGAATCCGATATAGAACGTAAAATGAGGAAAAGGATTATGAAGTACATGAATATCTCT
AACCATGACTACTCAATGGTCTTTACAGCTAACCAATCTTCTGCATTTAAGCTCTTGGCT
GACTCTTATCCCTTTGAGTCTAATCCTAACCTCCTTACAGCTTACGATCATGAAAATGAA
GCAGTGGAAGGGATGATCGATAACGCTAAGAAAAAAGGGGCTAAAGTGGTATCAGCAGAG
TTCTCATGGCCTAATTTGAGAATCAATTCAAGAAAACTGCGAAAAACGCTTAGTGTCAAG
AAGAAACAGGGGTTATTTGTTTTCCCTCTTCAGTCTAAAGTAACGGGAACAAGATATTCG
TATCAATGGATGAATATTGCACAAGAAAACGGATGGCATGTCGTGTTTGATGCATCTGCT
TTAGGTCCCAAAGACATGGAAACATTAGGCTTGTCGATTTTTCAGCCTGATTTTCTCATT
TGCAATTTCTACAAAGTGTTTGGTGAAAATCCTTCTGGTTTTTGTTGTTTGTTCGTGAAA
AACTCAACCATATCACAGTTGAACAAATCATTCACTAGCTTGGGAATTATTCGTCTTGTT
CCAGTCGACGCGAAATCATTTGAACACAAAAACGACTCCTCTTCTTCAATTTCATCAGAA
TACAATCAAGAAAACTCTGTTTCAGAATTCCAAGAAATCGAACAAGTGTCTGATCAAGAA
CCAAAGAAAATAACCACATTGTTCGAAATACTGAATTGGGGTAACAAATCCAAACAGAAG
ACTCTTTCAACGACAACTACGAGCTCAAATGAACTGGAATGCAGAGGATTAGATCATGCT
GATAAACTCGGCTTAATACTAACAAGTAGCAGAGCAAGGTACCTTATAAACTGGCTAATA
AACGCGTTAACGCGTCTTCAACATCCTCATACTGAAGATATTCATATTCCTTTAGTGAAA
ATTTATGGATCAAAGATACATTTCAATAGAGGACCAGCTGTGGCATTCAATGTGTTTGAT
TGGAAAGGCCAAAAGATTGATCCAACACTAGTACAAAAGCTTGCGGATCGACACAACATA
TCACTTTCTTGCGCATTTTTGAAACATATATGGTTTTCAAAAATGTATGATGATGAAAAA
AACACAATCTTGGAGAGTTGTGATGATGATAATTATAATAATAAGAAGAAGAAGAAGAAG
GGGAAATTGAGTTGTGGTGTATCAGTTATTAGTGTTTCAATTGGAATGATGACAAATTTT
GAAGATTTGTATAAGTTATGGAGTTTTATAGCTAGATTTTTGGATGCTGATTTTGTTGAG
AAAGAGAAATGGAGATATAAGGCACTTAATCAAACAACTATTGAGGTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400039441
PEP Infomation

pacid=37470829 transcript=PGSC0003DMT400058565 locus=PGSC0003DMG400022751 ID=PGSC0003DMT400058565.v4.03 annot-version=v4.03
Sequence

MQSPCFNCICCQNSHGDKNPTSKISIIITCHREFIDAVASSIQPNSQFTNHECLPSCAEL
FANLQEAYPHYSQTNLADEIRANEYYHLTLSKHVCFDYIGNGLFSYYQQQNMIKSHPIHD
SIASSSSAPPPPPPPPTHNEPFFNISYKSVSLTTQLLYGGQESDIERKMRKRIMKYMNIS
NHDYSMVFTANQSSAFKLLADSYPFESNPNLLTAYDHENEAVEGMIDNAKKKGAKVVSAE
FSWPNLRINSRKLRKTLSVKKKQGLFVFPLQSKVTGTRYSYQWMNIAQENGWHVVFDASA
LGPKDMETLGLSIFQPDFLICNFYKVFGENPSGFCCLFVKNSTISQLNKSFTSLGIIRLV
PVDAKSFEHKNDSSSSISSEYNQENSVSEFQEIEQVSDQEPKKITTLFEILNWGNKSKQK
TLSTTTTSSNELECRGLDHADKLGLILTSSRARYLINWLINALTRLQHPHTEDIHIPLVK
IYGSKIHFNRGPAVAFNVFDWKGQKIDPTLVQKLADRHNISLSCAFLKHIWFSKMYDDEK
NTILESCDDDNYNNKKKKKKGKLSCGVSVISVSIGMMTNFEDLYKLWSFIARFLDADFVE
KEKWRYKALNQTTIEV*

Transcript Sequence

Transcript ID

PGSC0003DMT400058565
Transcript Infomation

pacid=37470829 locus=PGSC0003DMG400022751 ID=PGSC0003DMT400058565.v4.03 annot-version=v4.03
Sequence

ATGCAATCACCTTGTTTCAACTGTATTTGCTGCCAGAATTCCCATGGAGATAAAAACCCC
ACCTCTAAAATCAGCATAATCATCACTTGTCATCGCGAATTCATCGATGCAGTAGCTTCA
TCCATCCAGCCAAATTCCCAATTCACTAACCATGAGTGTTTGCCTTCTTGTGCAGAACTA
TTTGCCAACTTACAAGAAGCGTATCCACATTACAGTCAGACTAATCTTGCTGATGAAATT
CGAGCTAACGAATACTATCACCTCACTCTTTCGAAACATGTTTGTTTTGATTACATTGGA
AATGGCCTTTTTTCTTACTACCAACAACAGAACATGATCAAATCTCATCCAATTCACGAT
TCAATCGCCTCTTCATCATCAGCTCCACCTCCTCCTCCTCCTCCTCCTACTCACAACGAA
CCTTTCTTTAACATTTCGTATAAGTCAGTGAGTTTAACTACTCAATTGCTCTACGGAGGG
CAAGAATCCGATATAGAACGTAAAATGAGGAAAAGGATTATGAAGTACATGAATATCTCT
AACCATGACTACTCAATGGTCTTTACAGCTAACCAATCTTCTGCATTTAAGCTCTTGGCT
GACTCTTATCCCTTTGAGTCTAATCCTAACCTCCTTACAGCTTACGATCATGAAAATGAA
GCAGTGGAAGGGATGATCGATAACGCTAAGAAAAAAGGGGCTAAAGTGGTATCAGCAGAG
TTCTCATGGCCTAATTTGAGAATCAATTCAAGAAAACTGCGAAAAACGCTTAGTGTCAAG
AAGAAACAGGGGTTATTTGTTTTCCCTCTTCAGTCTAAAGTAACGGGAACAAGATATTCG
TATCAATGGATGAATATTGCACAAGAAAACGGATGGCATGTCGTGTTTGATGCATCTGCT
TTAGGTCCCAAAGACATGGAAACATTAGGCTTGTCGATTTTTCAGCCTGATTTTCTCATT
TGCAATTTCTACAAAGTGTTTGGTGAAAATCCTTCTGGTTTTTGTTGTTTGTTCGTGAAA
AACTCAACCATATCACAGTTGAACAAATCATTCACTAGCTTGGGAATTATTCGTCTTGTT
CCAGTCGACGCGAAATCATTTGAACACAAAAACGACTCCTCTTCTTCAATTTCATCAGAA
TACAATCAAGAAAACTCTGTTTCAGAATTCCAAGAAATCGAACAAGTGTCTGATCAAGAA
CCAAAGAAAATAACCACATTGTTCGAAATACTGAATTGGGGTAACAAATCCAAACAGAAG
ACTCTTTCAACGACAACTACGAGCTCAAATGAACTGGAATGCAGAGGATTAGATCATGCT
GATAAACTCGGCTTAATACTAACAAGTAGCAGAGCAAGGTACCTTATAAACTGGCTAATA
AACGCGTTAACGCGTCTTCAACATCCTCATACTGAAGATATTCATATTCCTTTAGTGAAA
ATTTATGGATCAAAGATACATTTCAATAGAGGACCAGCTGTGGCATTCAATGTGTTTGAT
TGGAAAGGCCAAAAGATTGATCCAACACTAGTACAAAAGCTTGCGGATCGACACAACATA
TCACTTTCTTGCGCATTTTTGAAACATATATGGTTTTCAAAAATGTATGATGATGAAAAA
AACACAATCTTGGAGAGTTGTGATGATGATAATTATAATAATAAGAAGAAGAAGAAGAAG
GGGAAATTGAGTTGTGGTGTATCAGTTATTAGTGTTTCAATTGGAATGATGACAAATTTT
GAAGATTTGTATAAGTTATGGAGTTTTATAGCTAGATTTTTGGATGCTGATTTTGTTGAG
AAAGAGAAATGGAGATATAAGGCACTTAATCAAACAACTATTGAGGTGTAG