Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058545
CDS Infomation

pacid=37468058 polypeptide=PGSC0003DMP400039429 locus=PGSC0003DMG400022743 ID=PGSC0003DMT400058545.v4.03 annot-version=v4.03
Sequence

ATGGCTCAACCATTTGAAATTCTTTTCCTGCTTCCATTTTTCCTCTTGCCCTTAACTTTT
TTCCTCTTCAAAGTTTTCAGATCATCCAAAATCACACAACTTCCACCAGGACCAACACCA
TGGCCAGTCATAGGAAACATTTTTCATATGGGAAAAATGCCTCATATAACTCTGACAAAT
TTTGCAAAAATATATGGCCCTCTTATGTCCCTAAGGCTTGGAACTCAATGCCTAGTTGTT
GGATCATCATCATCTGCTGCTATAGAAATCCTCAAAACCCATGATAGAATTCTGTCAGGA
AGACATGTTCCAAATGCTATGCCAGCAAAAAGATCAGATCTTGACAAGATATCAATGGGC
TGGAATTCTGAATGTCACAATGAATGGAGATGCTTGAGGACTTTATGCAAAACTGAGCTT
TTCTCAGGCAAAGTATTGGAGTCTCAAGCTTATTTGAGGGAGAAAAAAGTGATGGAATTG
GTAGAATTCTTGAGGTCAAAAGAAGGTCAAGTGGTGAATATTGGAGAGCTAGTCTTTGCA
ACTGTTTTGAACATGTTGAGTAATGTTCTGATATCTAAAGATATGGTTAATTTGGAGAAA
GAAACAGAAGATGGTGGGATTAGAAATCTAATAAGGGGATTAGTTGAAGCAGTCTCAGCT
CCAAATTTATCTGATTTTTATCCAGTTTTAGGTAAATTAGATCTTCAAGGTCTGCGAAAA
AGAGCTAGATATGTAATGACAAAGATTCGTTCCAACTGGGAACCGATTCTTGAAGAAAGA
AGGAAAAATAAAGTGAGTGGCTCTTCTAGCCAACAAGATTTCTTGGAAGCTCTCCTTGAT
AATGGTCTTACCAATGATTGTATCCACCAGCTATTCGTGGAGTTAGTCGCTGCTGGTTCA
GACACCAGTACCTCAACAATTGAGTGGGCGATGGCAGAACTGATAAAAAATGTAGAGTCA
ATGAAGAAAGTTCAAGAGGAGCTCGAGATAGAACTCAGTGAAAGTGATTACCCAAACGAA
TCTCAATTGCTGCAGATGTCCTATGTCCAAGCCTGTATGAAGGAAACACTTAGGTTGCAT
CCTCCAGCACCATTTCTGCTTCCACATCGTGCTATCGAAACCTGCCAAGTGATGAGTTAC
ACAATTCCTAAAGACGCTCAAATCTTGGTTAATGTCTGGGCTATCACAAGGGATCCTTTG
ATATGGGAAGACCCAGAGATGTTTAGACCACAGAGGTTTCTGAGTTCCGATATGGACTTC
AAAGGGAATGACTTTGAGTTCTTACCCTTCGGTGCAGGAAGGAGAATATGCCCAGGCTTG
CCAATGGCTGCAATAAAAGTTCCTTTAGTCCTTGCTTCGCTTGTTCATTTCTTTGATTGG
GAGCTTCCTCATGGAAAACGTCCCACCGAGCTAGACATGACTGAAAAGTTTGGAGTAACA
CTGCAAAAGAAAGAACCGCTGCTTCTGATTCCCAAGGCCAGAAAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400039429
PEP Infomation

pacid=37468058 transcript=PGSC0003DMT400058545 locus=PGSC0003DMG400022743 ID=PGSC0003DMT400058545.v4.03 annot-version=v4.03
Sequence

MAQPFEILFLLPFFLLPLTFFLFKVFRSSKITQLPPGPTPWPVIGNIFHMGKMPHITLTN
FAKIYGPLMSLRLGTQCLVVGSSSSAAIEILKTHDRILSGRHVPNAMPAKRSDLDKISMG
WNSECHNEWRCLRTLCKTELFSGKVLESQAYLREKKVMELVEFLRSKEGQVVNIGELVFA
TVLNMLSNVLISKDMVNLEKETEDGGIRNLIRGLVEAVSAPNLSDFYPVLGKLDLQGLRK
RARYVMTKIRSNWEPILEERRKNKVSGSSSQQDFLEALLDNGLTNDCIHQLFVELVAAGS
DTSTSTIEWAMAELIKNVESMKKVQEELEIELSESDYPNESQLLQMSYVQACMKETLRLH
PPAPFLLPHRAIETCQVMSYTIPKDAQILVNVWAITRDPLIWEDPEMFRPQRFLSSDMDF
KGNDFEFLPFGAGRRICPGLPMAAIKVPLVLASLVHFFDWELPHGKRPTELDMTEKFGVT
LQKKEPLLLIPKARK*

Transcript Sequence

Transcript ID

PGSC0003DMT400058545
Transcript Infomation

pacid=37468058 locus=PGSC0003DMG400022743 ID=PGSC0003DMT400058545.v4.03 annot-version=v4.03
Sequence

ATGGCTCAACCATTTGAAATTCTTTTCCTGCTTCCATTTTTCCTCTTGCCCTTAACTTTT
TTCCTCTTCAAAGTTTTCAGATCATCCAAAATCACACAACTTCCACCAGGACCAACACCA
TGGCCAGTCATAGGAAACATTTTTCATATGGGAAAAATGCCTCATATAACTCTGACAAAT
TTTGCAAAAATATATGGCCCTCTTATGTCCCTAAGGCTTGGAACTCAATGCCTAGTTGTT
GGATCATCATCATCTGCTGCTATAGAAATCCTCAAAACCCATGATAGAATTCTGTCAGGA
AGACATGTTCCAAATGCTATGCCAGCAAAAAGATCAGATCTTGACAAGATATCAATGGGC
TGGAATTCTGAATGTCACAATGAATGGAGATGCTTGAGGACTTTATGCAAAACTGAGCTT
TTCTCAGGCAAAGTATTGGAGTCTCAAGCTTATTTGAGGGAGAAAAAAGTGATGGAATTG
GTAGAATTCTTGAGGTCAAAAGAAGGTCAAGTGGTGAATATTGGAGAGCTAGTCTTTGCA
ACTGTTTTGAACATGTTGAGTAATGTTCTGATATCTAAAGATATGGTTAATTTGGAGAAA
GAAACAGAAGATGGTGGGATTAGAAATCTAATAAGGGGATTAGTTGAAGCAGTCTCAGCT
CCAAATTTATCTGATTTTTATCCAGTTTTAGGTAAATTAGATCTTCAAGGTCTGCGAAAA
AGAGCTAGATATGTAATGACAAAGATTCGTTCCAACTGGGAACCGATTCTTGAAGAAAGA
AGGAAAAATAAAGTGAGTGGCTCTTCTAGCCAACAAGATTTCTTGGAAGCTCTCCTTGAT
AATGGTCTTACCAATGATTGTATCCACCAGCTATTCGTGGAGTTAGTCGCTGCTGGTTCA
GACACCAGTACCTCAACAATTGAGTGGGCGATGGCAGAACTGATAAAAAATGTAGAGTCA
ATGAAGAAAGTTCAAGAGGAGCTCGAGATAGAACTCAGTGAAAGTGATTACCCAAACGAA
TCTCAATTGCTGCAGATGTCCTATGTCCAAGCCTGTATGAAGGAAACACTTAGGTTGCAT
CCTCCAGCACCATTTCTGCTTCCACATCGTGCTATCGAAACCTGCCAAGTGATGAGTTAC
ACAATTCCTAAAGACGCTCAAATCTTGGTTAATGTCTGGGCTATCACAAGGGATCCTTTG
ATATGGGAAGACCCAGAGATGTTTAGACCACAGAGGTTTCTGAGTTCCGATATGGACTTC
AAAGGGAATGACTTTGAGTTCTTACCCTTCGGTGCAGGAAGGAGAATATGCCCAGGCTTG
CCAATGGCTGCAATAAAAGTTCCTTTAGTCCTTGCTTCGCTTGTTCATTTCTTTGATTGG
GAGCTTCCTCATGGAAAACGTCCCACCGAGCTAGACATGACTGAAAAGTTTGGAGTAACA
CTGCAAAAGAAAGAACCGCTGCTTCTGATTCCCAAGGCCAGAAAATGA