Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058533
CDS Infomation

pacid=37470060 polypeptide=PGSC0003DMP400039420 locus=PGSC0003DMG402022737 ID=PGSC0003DMT400058533.v4.03 annot-version=v4.03
Sequence

ATGGGTTTCCCAGCTAATGGTTCATCACAAGATAAGCCATACAAGTTCTTGATCTATGGC
CGAACCGGTTGGATTGGTGGCTTACTCGGTAAGCTCTGTGAAGCTCAAGGCATAGAGTAC
GAATACGGGTCGGGTCGATTAGAGAATCGGAGCTCCTTAGAGTCCGACCTCACCACCGTC
AAGCCGACCCATGTGTTCAACGCCGCCGGTGTTACCGGCCGGCCAAATGTTGACTGGTGT
GAATCCCATAAGGTGGAGACCATCAGAGCTAATGTGGTCGGCACGCTGACGCTTGCTGAT
GTTTGTAGAGAGAAAGGGTTGATCCTTATCAACTATGCTACTGGGTGTATTTTTGAATAC
GATTCGGGTCATAAATTAGGGTCGGGTAACGGATTCAAGGAAGAGGATACTCCTAATTTC
ATCGGATCTTTCTATTCAAAGACTAAAGCTATGGTGGAGGAATTGCTGAAAAACTACGAC
AACGTCTGTACACTACGAGTCAGAATGCCCATCTCCGCAGACTTGACCAACCCCCGAAAC
TTCATCACCAAGATCAGTCGATATGAGAAGGTAGTAGACATCCCAAACTCGATGACAATC
TTGGATGAACTTCTCCCTATTTCCATCGAGATGGCAAAGAGAAACCTCACTGGCATATGG
AACTTCACAAATCCTGGAGTTGTTAGCCATAACGAGATCCTGGAGATGTACCGTGACTAT
ATTGACCCAAGCTTCAGCTGGAAGAACTTCACAATCGAGGAGCAAGCAAAGGTCATTGTC
GCTCCACGAAGCAACAATGAGCTCGATGCTTCGAAATTGAGCAAGGAATTCCCTGAAATG
AAGTCCATCAAGGAGTCCCTCATTGAGAATGTGTTCAAGCCAAATAGGAAGACACCAGTA
GCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400039420
PEP Infomation

pacid=37470060 transcript=PGSC0003DMT400058533 locus=PGSC0003DMG402022737 ID=PGSC0003DMT400058533.v4.03 annot-version=v4.03
Sequence

MGFPANGSSQDKPYKFLIYGRTGWIGGLLGKLCEAQGIEYEYGSGRLENRSSLESDLTTV
KPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREKGLILINYATGCIFEY
DSGHKLGSGNGFKEEDTPNFIGSFYSKTKAMVEELLKNYDNVCTLRVRMPISADLTNPRN
FITKISRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYRDY
IDPSFSWKNFTIEEQAKVIVAPRSNNELDASKLSKEFPEMKSIKESLIENVFKPNRKTPV
A*

Transcript Sequence

Transcript ID

PGSC0003DMT400058533
Transcript Infomation

pacid=37470060 locus=PGSC0003DMG402022737 ID=PGSC0003DMT400058533.v4.03 annot-version=v4.03
Sequence

ATGGGTTTCCCAGCTAATGGTTCATCACAAGATAAGCCATACAAGTTCTTGATCTATGGC
CGAACCGGTTGGATTGGTGGCTTACTCGGTAAGCTCTGTGAAGCTCAAGGCATAGAGTAC
GAATACGGGTCGGGTCGATTAGAGAATCGGAGCTCCTTAGAGTCCGACCTCACCACCGTC
AAGCCGACCCATGTGTTCAACGCCGCCGGTGTTACCGGCCGGCCAAATGTTGACTGGTGT
GAATCCCATAAGGTGGAGACCATCAGAGCTAATGTGGTCGGCACGCTGACGCTTGCTGAT
GTTTGTAGAGAGAAAGGGTTGATCCTTATCAACTATGCTACTGGGTGTATTTTTGAATAC
GATTCGGGTCATAAATTAGGGTCGGGTAACGGATTCAAGGAAGAGGATACTCCTAATTTC
ATCGGATCTTTCTATTCAAAGACTAAAGCTATGGTGGAGGAATTGCTGAAAAACTACGAC
AACGTCTGTACACTACGAGTCAGAATGCCCATCTCCGCAGACTTGACCAACCCCCGAAAC
TTCATCACCAAGATCAGTCGATATGAGAAGGTAGTAGACATCCCAAACTCGATGACAATC
TTGGATGAACTTCTCCCTATTTCCATCGAGATGGCAAAGAGAAACCTCACTGGCATATGG
AACTTCACAAATCCTGGAGTTGTTAGCCATAACGAGATCCTGGAGATGTACCGTGACTAT
ATTGACCCAAGCTTCAGCTGGAAGAACTTCACAATCGAGGAGCAAGCAAAGGTCATTGTC
GCTCCACGAAGCAACAATGAGCTCGATGCTTCGAAATTGAGCAAGGAATTCCCTGAAATG
AAGTCCATCAAGGAGTCCCTCATTGAGAATGTGTTCAAGCCAAATAGGAAGACACCAGTA
GCTTGA