Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058532
CDS Infomation

pacid=37469613 polypeptide=PGSC0003DMP400039419 locus=PGSC0003DMG401022737 ID=PGSC0003DMT400058532.v4.03 annot-version=v4.03
Sequence

ATGGCTCAATTCTCTTATTCTGAATCTATGTCTGGAAGTTCACAACATGGGGTCCAGGTT
GTCCCATTTAAGACATCAGCAGGATCACTTAGGGTATTGTTGTTGCATGGAAACTTGGAT
ATTTGGGTGAGGGAGGCTAGGAATTTGCCAAACATGGATTTATTTCATAAGAAATTGGAT
AACTTGTTGGGAGGATTGGCAAAACTTGGTAGTAAAAAAGAAGGATCTCCTAAAATTACT
AGTGATCCTTATGTCACAGTTTCAGTATCTAATGCTGTAGTTGCTAGGACCTATGTGATT
AACAATAGCGAAAATCCGGTATGGATGCAGCATTTTTATGTACCAGTGGCACATTATGCA
TCAGAAGTGCACTTTGTTGTTAAAGATAATGATGTTGTAGGATCACAAATTATTGGTGCT
GTGGGAATTTCTGTAGAGCAGCTATGTTCTGGTGCAATGATTGAGGGAACATTTCCAGTT
CTTAATAGTAGTGGGAAGCCATGTAAGGAGGGAGCTGTACTTACTCTATCAATTCAATTC
ACTCCAATGGAGAGGGTACCCCTTTATCATGGTGGTGTGGGGGGAGATCACGAGTATCAG
GGCGTGCCGGGGACTTACTTCCCTCTTAGAAGAGGTGGCAAAGTAACACTTTATCAGGAT
GCTCATGTACCTGAAGGCAGCCTCCCGAACTTGTGGCTTGAAAATAGAGTGCAGTATCAG
CATGGACAGTGCTGGCAGGATATATTTGATGCAATCACTCAAGCTCGTCGGTTGATTTAC
ATTACAGGATGGTCTGTCACCCACCTAGTTACACTTGTTCGGGATAATGACAATGCTGAG
AAGAGTATGTTGGGGGAAATTCTCAAGAGGAAGTCCCAGGAAGGTGTGAGAGTACTGCTG
CTCATATGGGATGATCCAACTTCTAAGAGCATTTTGGGATACAAAACTGAAGGAATAATG
GGAACTAATGATGAAGAAACTCGTCGCTATTTTAAGCATTCTTCAGTGCAAGTGCTACTT
TGCCCTCGTTCTGCTGGAAAAGGACACAGCTGGGCCAAAAAGCAGGAAACTGAAACAATA
TACACGCATCATCAGAAAACTGTAATAGTGGATGCAGATGCTGGTAATTACCAGAGAAAG
ATTATGGCTTTTGTTGGGGGACTTGATTTGTGCAAAGGGCGTTATGATACTCCAGCACAC
CATATCTTTAGAACGTTGCAAAATGTGCACAAGGATGACTTTCATCAGCCTAACTACACG
GGCCCTACTACTGGTTGTCCTAGAGAACCTTGGCATGATTTGCATAGTCGGATCGAGGGG
CCTGCTGCATATGATGTCCTAAGTAACTTTGAGGAGCGCTGGTTGAAGGCTTCAAAGCGC
CATGGACTTCAAAAGATGAAAGCTTCACATGATGATGCATTACTCAAACTTGACAGGATT
CCTGATATTTTGGGAATAGCTGATGCCCCTTGCCTAAGAGAAGATGATGCAGATACGTGG
CACGTTCAGATTTTCCGGTCAATCGACTCCAACTCTGTTAAAGGTTTCCCCAAAGATCCC
AAAGAAGCCACTAACAAGAATCTAGTGTGTGGTAAGAATGTGCTGATAGATATGAGCATA
CATACTGCCTACGTAAAGGCAATTCGAGCTGCCCAGCATTTCATCTACATCGAGAATCAG
TACTTCCTAGGGTCTTCCTATAATTGGAGTAATTACCAAAATTTAGGTGCAAATAACTTG
ATACCAATGGAAATTGCTCTAAAAATTGCCAACAAAATACGAGCAAATGAGAGGTTTGCA
GCATATATAGTTCTTCCTATGTGGCCAGAGGGTAATCCAACCAGTACTGCTACTCAGAGA
ATACTTTTTTGGCAGCACAATACCATGCAGATGATGTACGGAACTATTTACAAAGCTTTA
CAAGAGGTAGGACTGGAAAACACATATGAACCCCAGGACTATTTGATTTTCTTCTGCCTT
GGCAATCGTGAGGTTCCGGAAAATGGAATCACTACAGTTGTCAGAAGTTCGAAGCCAAAT
ACACCTCAGGAACTCACTCAGAAAAGTCGTCGTTTTATGATCTATGTCCACTCCAAAGGA
ATGATTGTAGACGATGAGTATGTCATATTGGGATCTGCAAACATCAATCAACGTTCTCTG
GAAGGCACCAGGGATACTGAAATTGCAATGGGCGCGTATCAGCCTCATCATACATGGGCC
AACAAACATGCTGGACCACATGCGCAGATATATGGATATAGGATGTCACTGTGGGCAGAG
CACACGGGAACTCTAGAGCAATGCTTTGAGCATCCAGAGAGCCTTGAATGCGTGAGACGG
ATAAGAGTATTTGGTGAACACAACTGGCTACAATACGCGGCTGATGAAGTAACTGAAATG
AAAGGCCACCTTCTTAAGTATCCTGTTGAAGTTGATCGAACGGGGAAAGTCAAGTCACTT
CCTGGCTGTGAAACTTTTCCAGATATCGGAGGGAAGATAATAGGTACATTCACCGGTGTT
CAAGAAAATCTCACCATCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400039419
PEP Infomation

pacid=37469613 transcript=PGSC0003DMT400058532 locus=PGSC0003DMG401022737 ID=PGSC0003DMT400058532.v4.03 annot-version=v4.03
Sequence

MAQFSYSESMSGSSQHGVQVVPFKTSAGSLRVLLLHGNLDIWVREARNLPNMDLFHKKLD
NLLGGLAKLGSKKEGSPKITSDPYVTVSVSNAVVARTYVINNSENPVWMQHFYVPVAHYA
SEVHFVVKDNDVVGSQIIGAVGISVEQLCSGAMIEGTFPVLNSSGKPCKEGAVLTLSIQF
TPMERVPLYHGGVGGDHEYQGVPGTYFPLRRGGKVTLYQDAHVPEGSLPNLWLENRVQYQ
HGQCWQDIFDAITQARRLIYITGWSVTHLVTLVRDNDNAEKSMLGEILKRKSQEGVRVLL
LIWDDPTSKSILGYKTEGIMGTNDEETRRYFKHSSVQVLLCPRSAGKGHSWAKKQETETI
YTHHQKTVIVDADAGNYQRKIMAFVGGLDLCKGRYDTPAHHIFRTLQNVHKDDFHQPNYT
GPTTGCPREPWHDLHSRIEGPAAYDVLSNFEERWLKASKRHGLQKMKASHDDALLKLDRI
PDILGIADAPCLREDDADTWHVQIFRSIDSNSVKGFPKDPKEATNKNLVCGKNVLIDMSI
HTAYVKAIRAAQHFIYIENQYFLGSSYNWSNYQNLGANNLIPMEIALKIANKIRANERFA
AYIVLPMWPEGNPTSTATQRILFWQHNTMQMMYGTIYKALQEVGLENTYEPQDYLIFFCL
GNREVPENGITTVVRSSKPNTPQELTQKSRRFMIYVHSKGMIVDDEYVILGSANINQRSL
EGTRDTEIAMGAYQPHHTWANKHAGPHAQIYGYRMSLWAEHTGTLEQCFEHPESLECVRR
IRVFGEHNWLQYAADEVTEMKGHLLKYPVEVDRTGKVKSLPGCETFPDIGGKIIGTFTGV
QENLTI*

Transcript Sequence

Transcript ID

PGSC0003DMT400058532
Transcript Infomation

pacid=37469613 locus=PGSC0003DMG401022737 ID=PGSC0003DMT400058532.v4.03 annot-version=v4.03
Sequence

ATGGCTCAATTCTCTTATTCTGAATCTATGTCTGGAAGTTCACAACATGGGGTCCAGGTT
GTCCCATTTAAGACATCAGCAGGATCACTTAGGGTATTGTTGTTGCATGGAAACTTGGAT
ATTTGGGTGAGGGAGGCTAGGAATTTGCCAAACATGGATTTATTTCATAAGAAATTGGAT
AACTTGTTGGGAGGATTGGCAAAACTTGGTAGTAAAAAAGAAGGATCTCCTAAAATTACT
AGTGATCCTTATGTCACAGTTTCAGTATCTAATGCTGTAGTTGCTAGGACCTATGTGATT
AACAATAGCGAAAATCCGGTATGGATGCAGCATTTTTATGTACCAGTGGCACATTATGCA
TCAGAAGTGCACTTTGTTGTTAAAGATAATGATGTTGTAGGATCACAAATTATTGGTGCT
GTGGGAATTTCTGTAGAGCAGCTATGTTCTGGTGCAATGATTGAGGGAACATTTCCAGTT
CTTAATAGTAGTGGGAAGCCATGTAAGGAGGGAGCTGTACTTACTCTATCAATTCAATTC
ACTCCAATGGAGAGGGTACCCCTTTATCATGGTGGTGTGGGGGGAGATCACGAGTATCAG
GGCGTGCCGGGGACTTACTTCCCTCTTAGAAGAGGTGGCAAAGTAACACTTTATCAGGAT
GCTCATGTACCTGAAGGCAGCCTCCCGAACTTGTGGCTTGAAAATAGAGTGCAGTATCAG
CATGGACAGTGCTGGCAGGATATATTTGATGCAATCACTCAAGCTCGTCGGTTGATTTAC
ATTACAGGATGGTCTGTCACCCACCTAGTTACACTTGTTCGGGATAATGACAATGCTGAG
AAGAGTATGTTGGGGGAAATTCTCAAGAGGAAGTCCCAGGAAGGTGTGAGAGTACTGCTG
CTCATATGGGATGATCCAACTTCTAAGAGCATTTTGGGATACAAAACTGAAGGAATAATG
GGAACTAATGATGAAGAAACTCGTCGCTATTTTAAGCATTCTTCAGTGCAAGTGCTACTT
TGCCCTCGTTCTGCTGGAAAAGGACACAGCTGGGCCAAAAAGCAGGAAACTGAAACAATA
TACACGCATCATCAGAAAACTGTAATAGTGGATGCAGATGCTGGTAATTACCAGAGAAAG
ATTATGGCTTTTGTTGGGGGACTTGATTTGTGCAAAGGGCGTTATGATACTCCAGCACAC
CATATCTTTAGAACGTTGCAAAATGTGCACAAGGATGACTTTCATCAGCCTAACTACACG
GGCCCTACTACTGGTTGTCCTAGAGAACCTTGGCATGATTTGCATAGTCGGATCGAGGGG
CCTGCTGCATATGATGTCCTAAGTAACTTTGAGGAGCGCTGGTTGAAGGCTTCAAAGCGC
CATGGACTTCAAAAGATGAAAGCTTCACATGATGATGCATTACTCAAACTTGACAGGATT
CCTGATATTTTGGGAATAGCTGATGCCCCTTGCCTAAGAGAAGATGATGCAGATACGTGG
CACGTTCAGATTTTCCGGTCAATCGACTCCAACTCTGTTAAAGGTTTCCCCAAAGATCCC
AAAGAAGCCACTAACAAGAATCTAGTGTGTGGTAAGAATGTGCTGATAGATATGAGCATA
CATACTGCCTACGTAAAGGCAATTCGAGCTGCCCAGCATTTCATCTACATCGAGAATCAG
TACTTCCTAGGGTCTTCCTATAATTGGAGTAATTACCAAAATTTAGGTGCAAATAACTTG
ATACCAATGGAAATTGCTCTAAAAATTGCCAACAAAATACGAGCAAATGAGAGGTTTGCA
GCATATATAGTTCTTCCTATGTGGCCAGAGGGTAATCCAACCAGTACTGCTACTCAGAGA
ATACTTTTTTGGCAGCACAATACCATGCAGATGATGTACGGAACTATTTACAAAGCTTTA
CAAGAGGTAGGACTGGAAAACACATATGAACCCCAGGACTATTTGATTTTCTTCTGCCTT
GGCAATCGTGAGGTTCCGGAAAATGGAATCACTACAGTTGTCAGAAGTTCGAAGCCAAAT
ACACCTCAGGAACTCACTCAGAAAAGTCGTCGTTTTATGATCTATGTCCACTCCAAAGGA
ATGATTGTAGACGATGAGTATGTCATATTGGGATCTGCAAACATCAATCAACGTTCTCTG
GAAGGCACCAGGGATACTGAAATTGCAATGGGCGCGTATCAGCCTCATCATACATGGGCC
AACAAACATGCTGGACCACATGCGCAGATATATGGATATAGGATGTCACTGTGGGCAGAG
CACACGGGAACTCTAGAGCAATGCTTTGAGCATCCAGAGAGCCTTGAATGCGTGAGACGG
ATAAGAGTATTTGGTGAACACAACTGGCTACAATACGCGGCTGATGAAGTAACTGAAATG
AAAGGCCACCTTCTTAAGTATCCTGTTGAAGTTGATCGAACGGGGAAAGTCAAGTCACTT
CCTGGCTGTGAAACTTTTCCAGATATCGGAGGGAAGATAATAGGTACATTCACCGGTGTT
CAAGAAAATCTCACCATCTGA