Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058521
CDS Infomation

pacid=37469921 polypeptide=PGSC0003DMP400039411 locus=PGSC0003DMG400022731 ID=PGSC0003DMT400058521.v4.03 annot-version=v4.03
Sequence

ATGGCCACCAAACTTGGATTCAGTATAACAAGCTCTAAACTTTTTCATGCCCCTTTTAAA
AGACCAATCTTTTCTTCTTCTTCTTCACCAAGGCTCCCATTGATCCCTTTTGTTGCCAGT
AGGAAGTTGTCTATTAGAAGAAAGTTGTTGATTCTTTCCCCTAAGGCTGCTGCTGACCAG
CCAGGTCAGGTCAAAGAGGAAGCGGAAGAGGACACCAAAATTTTGCAGTATTGTAGTCTT
GACAGGAAAGAAAAGAAATCTATGGGTGAAATGGAACAAGAGTTTCTCCAAGCACTACAA
TCATTCTATTATGAAGGAAAGGCCATAATGTCGAATGAGGAATTTGATAACCTCAAGGAA
GAACTTATGTGGGAAGGGAGCAGCGTTGTCATGCTAAGTGCCGATGAACAGAGATTTTTG
GAAGCTTCTATGGCTTATGTATCTGGGAATCCGATTTTGACAGATCAAGAGTTTGACAAG
CTGAAGTTGAAACTTAAGATGGATGGCAGTGATATTGTGGTTGAGGGTCCACGATGCAGT
CTCCGTAGTAGAAAGGTTTACAGTGACCTTTATATTGATTATCTGAAGATGTTCTTGCTA
AATGTCCCTGCAGCTGTTGTTGCGCTTGGATTGTTTTTTTTCCTCGATGATTTAACTGGA
TTTGAGATCACTTATCTTTTGGAGCTTCCAGAGCCATTCAGCTTCATTTTCGTGTGGTTT
GCTGCATTGCCCTTCATATTGTGGCTATCCTTTACATTTACAAACATTATCGTTAAAGAT
TTTCTGATCTTAAAGGGCCCCTGTCCGAATTGTGGAACAGATAACACTTCCTTCTTCGGT
ACCATATTATCTGTGTCTAGTGGAGGTAAAACCAACAAAGTGAAATGCACAAATTGTGCT
ACGGAGATGATCTATGATTCAGCCACACGCTTAATCACATTGCCGGAAGGAAGTAGCGCA
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400039411
PEP Infomation

pacid=37469921 transcript=PGSC0003DMT400058521 locus=PGSC0003DMG400022731 ID=PGSC0003DMT400058521.v4.03 annot-version=v4.03
Sequence

MATKLGFSITSSKLFHAPFKRPIFSSSSSPRLPLIPFVASRKLSIRRKLLILSPKAAADQ
PGQVKEEAEEDTKILQYCSLDRKEKKSMGEMEQEFLQALQSFYYEGKAIMSNEEFDNLKE
ELMWEGSSVVMLSADEQRFLEASMAYVSGNPILTDQEFDKLKLKLKMDGSDIVVEGPRCS
LRSRKVYSDLYIDYLKMFLLNVPAAVVALGLFFFLDDLTGFEITYLLELPEPFSFIFVWF
AALPFILWLSFTFTNIIVKDFLILKGPCPNCGTDNTSFFGTILSVSSGGKTNKVKCTNCA
TEMIYDSATRLITLPEGSSA*

Transcript Sequence

Transcript ID

PGSC0003DMT400058521
Transcript Infomation

pacid=37469921 locus=PGSC0003DMG400022731 ID=PGSC0003DMT400058521.v4.03 annot-version=v4.03
Sequence

ATGGCCACCAAACTTGGATTCAGTATAACAAGCTCTAAACTTTTTCATGCCCCTTTTAAA
AGACCAATCTTTTCTTCTTCTTCTTCACCAAGGCTCCCATTGATCCCTTTTGTTGCCAGT
AGGAAGTTGTCTATTAGAAGAAAGTTGTTGATTCTTTCCCCTAAGGCTGCTGCTGACCAG
CCAGGTCAGGTCAAAGAGGAAGCGGAAGAGGACACCAAAATTTTGCAGTATTGTAGTCTT
GACAGGAAAGAAAAGAAATCTATGGGTGAAATGGAACAAGAGTTTCTCCAAGCACTACAA
TCATTCTATTATGAAGGAAAGGCCATAATGTCGAATGAGGAATTTGATAACCTCAAGGAA
GAACTTATGTGGGAAGGGAGCAGCGTTGTCATGCTAAGTGCCGATGAACAGAGATTTTTG
GAAGCTTCTATGGCTTATGTATCTGGGAATCCGATTTTGACAGATCAAGAGTTTGACAAG
CTGAAGTTGAAACTTAAGATGGATGGCAGTGATATTGTGGTTGAGGGTCCACGATGCAGT
CTCCGTAGTAGAAAGGTTTACAGTGACCTTTATATTGATTATCTGAAGATGTTCTTGCTA
AATGTCCCTGCAGCTGTTGTTGCGCTTGGATTGTTTTTTTTCCTCGATGATTTAACTGGA
TTTGAGATCACTTATCTTTTGGAGCTTCCAGAGCCATTCAGCTTCATTTTCGTGTGGTTT
GCTGCATTGCCCTTCATATTGTGGCTATCCTTTACATTTACAAACATTATCGTTAAAGAT
TTTCTGATCTTAAAGGGCCCCTGTCCGAATTGTGGAACAGATAACACTTCCTTCTTCGGT
ACCATATTATCTGTGTCTAGTGGAGGTAAAACCAACAAAGTGAAATGCACAAATTGTGCT
ACGGAGATGATCTATGATTCAGCCACACGCTTAATCACATTGCCGGAAGGAAGTAGCGCA
TGA