Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058515
CDS Infomation

pacid=37470371 polypeptide=PGSC0003DMP400039407 locus=PGSC0003DMG400022728 ID=PGSC0003DMT400058515.v4.03 annot-version=v4.03
Sequence

ATGAATTACATTTTTATTTTCTCTATTGCTTTCTTGTTGAGTTTGCATTTGACAGTTGCA
CAACGTTCAACTGCATTGCAAACTTACCTTGTTCATGTAAACAAGCCAGATGCCCGAATT
CTTGCTAACTCGGTTGATCTAGAAAGCTACTACAACTCCTTTTTACCGGAAGTGTTGGCT
GGTACAGAGGGGCCATCGCGCATTATTCACTCCTATCACCATGTGGCTATTGGCTTTGCG
GTCAGATTGTCAGCTGAGGAGGTAAAAGAAATGGAAAAGAAAGATGGTTTTGTGTCCGCG
AGGGTTGAGAAGATTTTAGCTTTGCATACAACGCATACTCCAAACTTCTTGGGGTTGTAT
CGGAATGTGGGGTTCTGGCAAGAATCAAATTATGGTAAGGGTGTGATTATTGGGGTTCTA
GACACTGGGATTACTCCGAGTCATCCATCTTTTAGTGATGAGAACATGCCATCTCCACCG
GCAAAGTGGAAAGGGAAATGTGAGTTCACAGGAAATGTGACGTGTAACAAGAAGATCATT
GGCGCGAGGAATTTGGTGAGTGGTTCAAGTGATCCACCTTTTGATGAGGAAGGTCATGGT
ACTCATACTTCAAGTACGGCAGCTGGTAACTTTGTCGATGATGCAAGTTTGTTTGGCAAT
GCCAATGGCACAGCAGCCGGTATGGCCCCTCTTGCTCACATTGCTATGTACAAGGTGTGT
ACAGAAGGTTGTTCAGATGTTGATATACTGGCTGCATTAGATGCTGCAATAGATGACGGT
GTTGACGTGCTATCTCTCTCCATAGGAGGATTTTCTGATCCGTTTTATGAAGATAGTATT
GCCACTGGGGCATTTGCTGCAATGCAAAAGGGTATCTTTGTGAGTGCTTCTGCTGGTAAT
GAAGGTCCGTTGAATTCTACATTATCTAATGAGGCCCCTTGGATTCTCACAGTTGGCGCT
AGCACCCATGATAGGAAGATAGTGGCAACAGCTGTGCTAGGGAATGGACAAGAATATGAT
GGTGAATCGTCTTTTCAGCCCACGAGTTTTCCTCATACTTTATTGCCCTTGGTATACCCT
GGCCTGTCCGATCAAGAAGCTGCACTCTGTTCATCAGGATCCCTTAATAACACCGATGTC
AAAGGCAAGGTTGTCGTGTGTGACAGAGGTGGCGGTGTAGCAAGACTTGAGAAAAGCCAG
ACAGTAAAGGATGCCGGTGGTGCTGCCATGATTCTTGCCAACCTAGAGATTGACGGAGAT
GGCACATTTGCTGATGCTCATGTTCTTCCTGCGACACACGTGGGTTATACTGCTGGAGAA
AGTATTAAAGCATACATAAACTCAACCTCCACACCCTCGGCTGGAATCCTTTTCAAAGGC
ACAAGTATAGGCTTTAAGAGTTCACCATCTGTATCATCTTTTTCCTCCAGGGGTCCTAAC
TTGGCAAGTCCAGGCATAGTCAAACCAGACATTATCGGTCCTGGAGTGAACGTCCTTGCA
GCATGGCCCGTCTCAGTAGAGAACAAAACTGGCACTGATTTGACATTTAACATCATCTCA
GGAACCTCAATGTCATGTCCTCACCTTAGTGGCATTGCAGCTCTGCTTAAAAGTGCACAC
CCTGATTGGTCACCAGCTGCTATTAAATCCGCGATAATGACTACAGCTGATCAATTCAAC
CTCGAAGGTCAACCCATCCTTGATCAGAGGGGTCTACCTGCTGATATTTTTGCCACTGGT
GCCGGCCATGTAAATCCATCAAAAGCAAGTGATCCCGGACTTATTTATGACATCAAAGTA
GAGAACTACATCCAATATCTATGTGGTCTAGGCTACAAGGATAAAGATATTGAACTCCTT
GTGCAACAAACAATCAAGTGTTCACTACAATCAAGTATATCCGAGGCAGAACTGAACTAT
CCTTCTTTCTCCATTATACTTGGACCACAGACTCAGAATTATACAAGAACAGTTACAAAC
GTTGGTGATGCAAGCTCAACTTACACCGTTAACATCACTCAAATTCAAGGAGTCGATGTA
GTTGTTGAGCCCGCCACCCTTGTCTTCACCCAGGTAAACCAACAGGCAACATATTCAGTA
TCATTTACCCAAACGGGGTTAATCACAGACCGCTTTGTTCAAGGAGCTTTATCATGGATC
TCTAACAAGTATGTTGTAAGAATTCCAATATCTGTTAAATTGGAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400039407
PEP Infomation

pacid=37470371 transcript=PGSC0003DMT400058515 locus=PGSC0003DMG400022728 ID=PGSC0003DMT400058515.v4.03 annot-version=v4.03
Sequence

MNYIFIFSIAFLLSLHLTVAQRSTALQTYLVHVNKPDARILANSVDLESYYNSFLPEVLA
GTEGPSRIIHSYHHVAIGFAVRLSAEEVKEMEKKDGFVSARVEKILALHTTHTPNFLGLY
RNVGFWQESNYGKGVIIGVLDTGITPSHPSFSDENMPSPPAKWKGKCEFTGNVTCNKKII
GARNLVSGSSDPPFDEEGHGTHTSSTAAGNFVDDASLFGNANGTAAGMAPLAHIAMYKVC
TEGCSDVDILAALDAAIDDGVDVLSLSIGGFSDPFYEDSIATGAFAAMQKGIFVSASAGN
EGPLNSTLSNEAPWILTVGASTHDRKIVATAVLGNGQEYDGESSFQPTSFPHTLLPLVYP
GLSDQEAALCSSGSLNNTDVKGKVVVCDRGGGVARLEKSQTVKDAGGAAMILANLEIDGD
GTFADAHVLPATHVGYTAGESIKAYINSTSTPSAGILFKGTSIGFKSSPSVSSFSSRGPN
LASPGIVKPDIIGPGVNVLAAWPVSVENKTGTDLTFNIISGTSMSCPHLSGIAALLKSAH
PDWSPAAIKSAIMTTADQFNLEGQPILDQRGLPADIFATGAGHVNPSKASDPGLIYDIKV
ENYIQYLCGLGYKDKDIELLVQQTIKCSLQSSISEAELNYPSFSIILGPQTQNYTRTVTN
VGDASSTYTVNITQIQGVDVVVEPATLVFTQVNQQATYSVSFTQTGLITDRFVQGALSWI
SNKYVVRIPISVKLE*

Transcript Sequence

Transcript ID

PGSC0003DMT400058515
Transcript Infomation

pacid=37470371 locus=PGSC0003DMG400022728 ID=PGSC0003DMT400058515.v4.03 annot-version=v4.03
Sequence

ATGAATTACATTTTTATTTTCTCTATTGCTTTCTTGTTGAGTTTGCATTTGACAGTTGCA
CAACGTTCAACTGCATTGCAAACTTACCTTGTTCATGTAAACAAGCCAGATGCCCGAATT
CTTGCTAACTCGGTTGATCTAGAAAGCTACTACAACTCCTTTTTACCGGAAGTGTTGGCT
GGTACAGAGGGGCCATCGCGCATTATTCACTCCTATCACCATGTGGCTATTGGCTTTGCG
GTCAGATTGTCAGCTGAGGAGGTAAAAGAAATGGAAAAGAAAGATGGTTTTGTGTCCGCG
AGGGTTGAGAAGATTTTAGCTTTGCATACAACGCATACTCCAAACTTCTTGGGGTTGTAT
CGGAATGTGGGGTTCTGGCAAGAATCAAATTATGGTAAGGGTGTGATTATTGGGGTTCTA
GACACTGGGATTACTCCGAGTCATCCATCTTTTAGTGATGAGAACATGCCATCTCCACCG
GCAAAGTGGAAAGGGAAATGTGAGTTCACAGGAAATGTGACGTGTAACAAGAAGATCATT
GGCGCGAGGAATTTGGTGAGTGGTTCAAGTGATCCACCTTTTGATGAGGAAGGTCATGGT
ACTCATACTTCAAGTACGGCAGCTGGTAACTTTGTCGATGATGCAAGTTTGTTTGGCAAT
GCCAATGGCACAGCAGCCGGTATGGCCCCTCTTGCTCACATTGCTATGTACAAGGTGTGT
ACAGAAGGTTGTTCAGATGTTGATATACTGGCTGCATTAGATGCTGCAATAGATGACGGT
GTTGACGTGCTATCTCTCTCCATAGGAGGATTTTCTGATCCGTTTTATGAAGATAGTATT
GCCACTGGGGCATTTGCTGCAATGCAAAAGGGTATCTTTGTGAGTGCTTCTGCTGGTAAT
GAAGGTCCGTTGAATTCTACATTATCTAATGAGGCCCCTTGGATTCTCACAGTTGGCGCT
AGCACCCATGATAGGAAGATAGTGGCAACAGCTGTGCTAGGGAATGGACAAGAATATGAT
GGTGAATCGTCTTTTCAGCCCACGAGTTTTCCTCATACTTTATTGCCCTTGGTATACCCT
GGCCTGTCCGATCAAGAAGCTGCACTCTGTTCATCAGGATCCCTTAATAACACCGATGTC
AAAGGCAAGGTTGTCGTGTGTGACAGAGGTGGCGGTGTAGCAAGACTTGAGAAAAGCCAG
ACAGTAAAGGATGCCGGTGGTGCTGCCATGATTCTTGCCAACCTAGAGATTGACGGAGAT
GGCACATTTGCTGATGCTCATGTTCTTCCTGCGACACACGTGGGTTATACTGCTGGAGAA
AGTATTAAAGCATACATAAACTCAACCTCCACACCCTCGGCTGGAATCCTTTTCAAAGGC
ACAAGTATAGGCTTTAAGAGTTCACCATCTGTATCATCTTTTTCCTCCAGGGGTCCTAAC
TTGGCAAGTCCAGGCATAGTCAAACCAGACATTATCGGTCCTGGAGTGAACGTCCTTGCA
GCATGGCCCGTCTCAGTAGAGAACAAAACTGGCACTGATTTGACATTTAACATCATCTCA
GGAACCTCAATGTCATGTCCTCACCTTAGTGGCATTGCAGCTCTGCTTAAAAGTGCACAC
CCTGATTGGTCACCAGCTGCTATTAAATCCGCGATAATGACTACAGCTGATCAATTCAAC
CTCGAAGGTCAACCCATCCTTGATCAGAGGGGTCTACCTGCTGATATTTTTGCCACTGGT
GCCGGCCATGTAAATCCATCAAAAGCAAGTGATCCCGGACTTATTTATGACATCAAAGTA
GAGAACTACATCCAATATCTATGTGGTCTAGGCTACAAGGATAAAGATATTGAACTCCTT
GTGCAACAAACAATCAAGTGTTCACTACAATCAAGTATATCCGAGGCAGAACTGAACTAT
CCTTCTTTCTCCATTATACTTGGACCACAGACTCAGAATTATACAAGAACAGTTACAAAC
GTTGGTGATGCAAGCTCAACTTACACCGTTAACATCACTCAAATTCAAGGAGTCGATGTA
GTTGTTGAGCCCGCCACCCTTGTCTTCACCCAGGTAAACCAACAGGCAACATATTCAGTA
TCATTTACCCAAACGGGGTTAATCACAGACCGCTTTGTTCAAGGAGCTTTATCATGGATC
TCTAACAAGTATGTTGTAAGAATTCCAATATCTGTTAAATTGGAATAA