Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058513
CDS Infomation

pacid=37469831 polypeptide=PGSC0003DMP400039406 locus=PGSC0003DMG400022727 ID=PGSC0003DMT400058513.v4.03 annot-version=v4.03
Sequence

ATGGGCGGCTACAGTGGCGATTCTTCAAAATCTTCAGCTGAATCTAGCTTTCGAGAACTT
GATGATGTGTTCTTGCAGACTCAAACAAGAATATGGCTTGGGGAAGTGTTGAAAATGAGA
TTGGATGGACACTTACATATTTCTGATTTGCTTGCTGATGGGGATCTTTTGTTTGAAGTT
GCCAAAGAATTATGGAATATGCTATTGGCAAAGTGCGGAGAGCTAAGACATATGAAGTAT
GAACCACTTGGATCGCGGAGATGCAGTGGAAGATATATGCCATATTCTAATGTTGACTCA
TTTTTGAAGATCTGCAAAATACTGGGATTAAATGGTATTGATCTCTTCTCCCCATCAGAT
GTCGTTGAGAAAAAGAACATTCGGAAAGTTTGCATTTGCTTAAGGGCACTCTCAAATAAG
GCCCGTTCCAAACAATTGAAGGTTCCTGACTTCAACTTGGTGACCTCTACGGTAGTCATG
CCAAAAAATATGGTGGGTGGCATTCGAAGAAGCTTGGAGACATCACAGGGCAGCCTTTCA
AGTTCTTCTGGTTATTACTCATATAAAGAAACAAGATCAAAACTTACGGAGAGAAATAAA
ATCACAGAGTCTGAAGCAAACTATGATTCTTCATCTGAAGAGTCTGATGAGGCTGAGAGC
AAATTTGTGGGAGAAGAGTCTTGTTGCTCATCTATGAATCAGCTTGAAGATGGTAATGCC
ACAGATTCAGATGCAGACAATTCTATTGGCGAATATTCAGCTGTTAGCAAGAATGGAAGA
GAGAAAAACAGAACTTCTCTAGGAAATGGAGGGAAATATATTAGTCCCAATGATAGGATA
CACTTTGATTATAGTAACCTTAATGCGGAAAATGATGAGTCAATTGTTGGAGATTCTATG
TATGATAACGAAATGGAAGGTAGTTGTATTTCCAACTACTTATCATTCTCAGATTCAATT
ATTGGTGGAACTGATGGTAGTACGCCTATTTTGCGGGAAGGTGAAGATAATATTTTGAAC
TTATTTATGGCAATTGATTCTCATAGACCAAATTCCGGTAAAGGGACTTTCCAGAATGGA
CATCAGCATAAATATTCTGATAATGAAGACGCAGAAGTTTCATCAACCACTAGCATGAGC
TCTGTACTAGGTCGGGTGCATGCTTTGGATTTTGATGACCAATTTGATGCAGACGAATGT
TTAACAGAAGAAACGTCTGGTTCCTTGCTGGAAAATGAGGCTGATCGGCAGCATAAGGAT
TTATCTGCAAGTCATGAAGCATGGAATGTTGCAACTACTGAACTCGTTTTTCATGATACT
AAGGAACCTTCTGTGGTAAAGCCTAAAATTTCTGCCAGTCTCAGTGAGCTCACATATCCC
GGTTCAGATGAATCGCTATCTGCTTCCGCACAGCCTCTTACAGACAAATTTGTTTCATTG
CATAGAAATAACTCAAATTACTTTGATTCAGATGTAGATATCGAGGTTGGAAGAAGTAAA
GATATGGTTTGTCTTGATACTGCTGCATGTAGAAATAATCTTAAGAATGCGTCTTTAGTT
GGCAGAAATGAAGGATGTGATGGTGATTCACAGTATCTCAAATTTGTTTCTGAAGTAGTC
AGTAGTACATGTGAACCATCCATGACTTTGGATGGTGTTAACATGGATCGGAATAATTCC
GTTATTTCTGCAAATTGTTGTGAACATATTGAAAAAGGGCACCCCTGTTCCTGCACTGTC
TATGGTTCAGGTGATGCAAGTGAAGTATGTAAACCAACACTTCCAGGAGATGATGGTGAC
AGGAAACATAAAGTTTCACATTTGTTGGAACAAAATGCTTCAGAGGGAAATCAAGAAACA
GATGCTGGTGAATTGAAAGATAAACGTCAACAGAGGCCATTGCTGAAAACAGTTGCTAGA
GGCACTGCACTTGTTGGTGTATTGTATCTGTTGCTGCATTTCAGTCGTAGGAGAAACAAA
CAGGAGGAAGGCAGTGAAGCCAACAGTAAACGAACTCAAAGTAAGAAGATTCGTGGCAGA
GATATCTCGTATGGGCATGGACAAAATGGACGTCGAGTAGATAGTATATATCCTTCTGAA
AAACTCAAGTTCAAGAATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400039406
PEP Infomation

pacid=37469831 transcript=PGSC0003DMT400058513 locus=PGSC0003DMG400022727 ID=PGSC0003DMT400058513.v4.03 annot-version=v4.03
Sequence

MGGYSGDSSKSSAESSFRELDDVFLQTQTRIWLGEVLKMRLDGHLHISDLLADGDLLFEV
AKELWNMLLAKCGELRHMKYEPLGSRRCSGRYMPYSNVDSFLKICKILGLNGIDLFSPSD
VVEKKNIRKVCICLRALSNKARSKQLKVPDFNLVTSTVVMPKNMVGGIRRSLETSQGSLS
SSSGYYSYKETRSKLTERNKITESEANYDSSSEESDEAESKFVGEESCCSSMNQLEDGNA
TDSDADNSIGEYSAVSKNGREKNRTSLGNGGKYISPNDRIHFDYSNLNAENDESIVGDSM
YDNEMEGSCISNYLSFSDSIIGGTDGSTPILREGEDNILNLFMAIDSHRPNSGKGTFQNG
HQHKYSDNEDAEVSSTTSMSSVLGRVHALDFDDQFDADECLTEETSGSLLENEADRQHKD
LSASHEAWNVATTELVFHDTKEPSVVKPKISASLSELTYPGSDESLSASAQPLTDKFVSL
HRNNSNYFDSDVDIEVGRSKDMVCLDTAACRNNLKNASLVGRNEGCDGDSQYLKFVSEVV
SSTCEPSMTLDGVNMDRNNSVISANCCEHIEKGHPCSCTVYGSGDASEVCKPTLPGDDGD
RKHKVSHLLEQNASEGNQETDAGELKDKRQQRPLLKTVARGTALVGVLYLLLHFSRRRNK
QEEGSEANSKRTQSKKIRGRDISYGHGQNGRRVDSIYPSEKLKFKN*

Transcript Sequence

Transcript ID

PGSC0003DMT400058513
Transcript Infomation

pacid=37469831 locus=PGSC0003DMG400022727 ID=PGSC0003DMT400058513.v4.03 annot-version=v4.03
Sequence

ATGGGCGGCTACAGTGGCGATTCTTCAAAATCTTCAGCTGAATCTAGCTTTCGAGAACTT
GATGATGTGTTCTTGCAGACTCAAACAAGAATATGGCTTGGGGAAGTGTTGAAAATGAGA
TTGGATGGACACTTACATATTTCTGATTTGCTTGCTGATGGGGATCTTTTGTTTGAAGTT
GCCAAAGAATTATGGAATATGCTATTGGCAAAGTGCGGAGAGCTAAGACATATGAAGTAT
GAACCACTTGGATCGCGGAGATGCAGTGGAAGATATATGCCATATTCTAATGTTGACTCA
TTTTTGAAGATCTGCAAAATACTGGGATTAAATGGTATTGATCTCTTCTCCCCATCAGAT
GTCGTTGAGAAAAAGAACATTCGGAAAGTTTGCATTTGCTTAAGGGCACTCTCAAATAAG
GCCCGTTCCAAACAATTGAAGGTTCCTGACTTCAACTTGGTGACCTCTACGGTAGTCATG
CCAAAAAATATGGTGGGTGGCATTCGAAGAAGCTTGGAGACATCACAGGGCAGCCTTTCA
AGTTCTTCTGGTTATTACTCATATAAAGAAACAAGATCAAAACTTACGGAGAGAAATAAA
ATCACAGAGTCTGAAGCAAACTATGATTCTTCATCTGAAGAGTCTGATGAGGCTGAGAGC
AAATTTGTGGGAGAAGAGTCTTGTTGCTCATCTATGAATCAGCTTGAAGATGGTAATGCC
ACAGATTCAGATGCAGACAATTCTATTGGCGAATATTCAGCTGTTAGCAAGAATGGAAGA
GAGAAAAACAGAACTTCTCTAGGAAATGGAGGGAAATATATTAGTCCCAATGATAGGATA
CACTTTGATTATAGTAACCTTAATGCGGAAAATGATGAGTCAATTGTTGGAGATTCTATG
TATGATAACGAAATGGAAGGTAGTTGTATTTCCAACTACTTATCATTCTCAGATTCAATT
ATTGGTGGAACTGATGGTAGTACGCCTATTTTGCGGGAAGGTGAAGATAATATTTTGAAC
TTATTTATGGCAATTGATTCTCATAGACCAAATTCCGGTAAAGGGACTTTCCAGAATGGA
CATCAGCATAAATATTCTGATAATGAAGACGCAGAAGTTTCATCAACCACTAGCATGAGC
TCTGTACTAGGTCGGGTGCATGCTTTGGATTTTGATGACCAATTTGATGCAGACGAATGT
TTAACAGAAGAAACGTCTGGTTCCTTGCTGGAAAATGAGGCTGATCGGCAGCATAAGGAT
TTATCTGCAAGTCATGAAGCATGGAATGTTGCAACTACTGAACTCGTTTTTCATGATACT
AAGGAACCTTCTGTGGTAAAGCCTAAAATTTCTGCCAGTCTCAGTGAGCTCACATATCCC
GGTTCAGATGAATCGCTATCTGCTTCCGCACAGCCTCTTACAGACAAATTTGTTTCATTG
CATAGAAATAACTCAAATTACTTTGATTCAGATGTAGATATCGAGGTTGGAAGAAGTAAA
GATATGGTTTGTCTTGATACTGCTGCATGTAGAAATAATCTTAAGAATGCGTCTTTAGTT
GGCAGAAATGAAGGATGTGATGGTGATTCACAGTATCTCAAATTTGTTTCTGAAGTAGTC
AGTAGTACATGTGAACCATCCATGACTTTGGATGGTGTTAACATGGATCGGAATAATTCC
GTTATTTCTGCAAATTGTTGTGAACATATTGAAAAAGGGCACCCCTGTTCCTGCACTGTC
TATGGTTCAGGTGATGCAAGTGAAGTATGTAAACCAACACTTCCAGGAGATGATGGTGAC
AGGAAACATAAAGTTTCACATTTGTTGGAACAAAATGCTTCAGAGGGAAATCAAGAAACA
GATGCTGGTGAATTGAAAGATAAACGTCAACAGAGGCCATTGCTGAAAACAGTTGCTAGA
GGCACTGCACTTGTTGGTGTATTGTATCTGTTGCTGCATTTCAGTCGTAGGAGAAACAAA
CAGGAGGAAGGCAGTGAAGCCAACAGTAAACGAACTCAAAGTAAGAAGATTCGTGGCAGA
GATATCTCGTATGGGCATGGACAAAATGGACGTCGAGTAGATAGTATATATCCTTCTGAA
AAACTCAAGTTCAAGAATTAG