Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058490
CDS Infomation

pacid=37438266 polypeptide=PGSC0003DMP400039390 locus=PGSC0003DMG400022715 ID=PGSC0003DMT400058490.v4.03 annot-version=v4.03
Sequence

ATGTCACCCAAAACCAAATCGCCGGCGACGAACACCGTCGCCGTCGCCGGACTACTAATT
CTCCTAATTCTACTATCGAACCACCACCATAACTGGACCGCTGCTGCTGCAACATCCTCC
AGCAGCAGCAGTCCAATAAAGACGGTGGTGGTTCTGGTAATGGAGAACAGATCGTTCGAC
CACATGTTAGGTTGGATGAAGAAGCTGAATCCAGAAATCAACGGCGTCGACGGTTCGGAA
TCGAATCCGATTTCAACATCGGATCCGAAATCCCGTCGGATTTTCTTCGGAGATCAATCT
CATTACGTCGATCCTGATCCTGGACATTCATTTCAAGCCATACGTGAACAGATTTTTGGA
TCAAATGAAAGTTCGAAAAAACCAGCACCAATGAATGGATTTGCTCAACAAGCTCTTTCA
ATGGATCCTAATATGCCTGATCAAGTCATGAATGGCTTCCAGCCTGAAATGGTGTCAGTA
TACAAAACACTGGTATCGGAATTTGCGGTGTTCGACCGGTGGTTTGCGTCGGTGCCGGCG
TCGACTCAACCGAATCGTCTCTACGTTCACTCCGGCACATCTCACGGCGCCACCTCAAAC
ATCGCGTCGCTGTTAGCTAAAGGTTACCCACAGAGAACGATCTTCGAGAATCTCGACGAC
GCCGGAGTAAATTTTGGAATCTATTATCAGAATATTCCGGCGACTCTGTTTTACCTGAAT
TTAAGAAAGCTTAAGTACGTCGGAAAATTCCATCCTTATGATCTCACATTCAAAAGTGAT
GCTAAATCAGGAAAGCTACCAGGATATGTGGTGGTGGAGCAGCGATACATGGACTCAAAA
TTAATTCCGGCTAACGATGATCATCCATCACATGATGTTTATCAAGGACAAATGTTCGTA
AAGGAGGTGTACGAAACTCTAAGGGCAAGTCCACAGTGGAACCAAACCCTTTTCGTGATT
ACCTACGATGAGCACGGTGGGTTCTTCGATCACGTCCCTACACCTGTCACCGGGGTCCCT
AGCCCGGATGGAATCGTAGGACCCGACCCGTTTTATTTCAAGTTCGATAGATTGGGGGTT
CGAGTTCCCACTATTATGATCTCTCCTTGGATTGAAAAGGGCACAGTTGTTCATGGTCCC
AATGGCTCTCCGTTTCCGACGTCGGAATATGAACATTCATCAATTCCAGCAACAGTGAAG
AAGATCTTTGATTTGCCATCACCTTTTCTTACTAAAAGAGATGCATGGGCTGGCACTTTT
GAACACATTCTACATATTAGAAAGGTGCCCAGAACTGATTGCCCTGAGAAACTTCCAACT
CCAACAAAGATAAGAAAGGGAGAAGCAAATGAAGATAAAAACATAAGTGAATTCCAGGAA
GAACTAGTGCAACTCGCCGCGGTTCTAAAAGGAGATCATCTCCTAACAAGTTATCCAGAA
AAGATAGGCAAAGGAATGACTGTAAGAGAAGGGAAAGCTTATATGGAAGACGCGGTTAAA
CGCTTCTTTGAAGCTGGATTTGCTGCCAAGAAAATTGGTGTTGATGAAGAACAAATTATA
CAAATGAGGCCTTCACTCACTACAAGATCATCATCTACTAATTTGCACCCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400039390
PEP Infomation

pacid=37438266 transcript=PGSC0003DMT400058490 locus=PGSC0003DMG400022715 ID=PGSC0003DMT400058490.v4.03 annot-version=v4.03
Sequence

MSPKTKSPATNTVAVAGLLILLILLSNHHHNWTAAAATSSSSSSPIKTVVVLVMENRSFD
HMLGWMKKLNPEINGVDGSESNPISTSDPKSRRIFFGDQSHYVDPDPGHSFQAIREQIFG
SNESSKKPAPMNGFAQQALSMDPNMPDQVMNGFQPEMVSVYKTLVSEFAVFDRWFASVPA
STQPNRLYVHSGTSHGATSNIASLLAKGYPQRTIFENLDDAGVNFGIYYQNIPATLFYLN
LRKLKYVGKFHPYDLTFKSDAKSGKLPGYVVVEQRYMDSKLIPANDDHPSHDVYQGQMFV
KEVYETLRASPQWNQTLFVITYDEHGGFFDHVPTPVTGVPSPDGIVGPDPFYFKFDRLGV
RVPTIMISPWIEKGTVVHGPNGSPFPTSEYEHSSIPATVKKIFDLPSPFLTKRDAWAGTF
EHILHIRKVPRTDCPEKLPTPTKIRKGEANEDKNISEFQEELVQLAAVLKGDHLLTSYPE
KIGKGMTVREGKAYMEDAVKRFFEAGFAAKKIGVDEEQIIQMRPSLTTRSSSTNLHP*

Transcript Sequence

Transcript ID

PGSC0003DMT400058490
Transcript Infomation

pacid=37438266 locus=PGSC0003DMG400022715 ID=PGSC0003DMT400058490.v4.03 annot-version=v4.03
Sequence

ATGTCACCCAAAACCAAATCGCCGGCGACGAACACCGTCGCCGTCGCCGGACTACTAATT
CTCCTAATTCTACTATCGAACCACCACCATAACTGGACCGCTGCTGCTGCAACATCCTCC
AGCAGCAGCAGTCCAATAAAGACGGTGGTGGTTCTGGTAATGGAGAACAGATCGTTCGAC
CACATGTTAGGTTGGATGAAGAAGCTGAATCCAGAAATCAACGGCGTCGACGGTTCGGAA
TCGAATCCGATTTCAACATCGGATCCGAAATCCCGTCGGATTTTCTTCGGAGATCAATCT
CATTACGTCGATCCTGATCCTGGACATTCATTTCAAGCCATACGTGAACAGATTTTTGGA
TCAAATGAAAGTTCGAAAAAACCAGCACCAATGAATGGATTTGCTCAACAAGCTCTTTCA
ATGGATCCTAATATGCCTGATCAAGTCATGAATGGCTTCCAGCCTGAAATGGTGTCAGTA
TACAAAACACTGGTATCGGAATTTGCGGTGTTCGACCGGTGGTTTGCGTCGGTGCCGGCG
TCGACTCAACCGAATCGTCTCTACGTTCACTCCGGCACATCTCACGGCGCCACCTCAAAC
ATCGCGTCGCTGTTAGCTAAAGGTTACCCACAGAGAACGATCTTCGAGAATCTCGACGAC
GCCGGAGTAAATTTTGGAATCTATTATCAGAATATTCCGGCGACTCTGTTTTACCTGAAT
TTAAGAAAGCTTAAGTACGTCGGAAAATTCCATCCTTATGATCTCACATTCAAAAGTGAT
GCTAAATCAGGAAAGCTACCAGGATATGTGGTGGTGGAGCAGCGATACATGGACTCAAAA
TTAATTCCGGCTAACGATGATCATCCATCACATGATGTTTATCAAGGACAAATGTTCGTA
AAGGAGGTGTACGAAACTCTAAGGGCAAGTCCACAGTGGAACCAAACCCTTTTCGTGATT
ACCTACGATGAGCACGGTGGGTTCTTCGATCACGTCCCTACACCTGTCACCGGGGTCCCT
AGCCCGGATGGAATCGTAGGACCCGACCCGTTTTATTTCAAGTTCGATAGATTGGGGGTT
CGAGTTCCCACTATTATGATCTCTCCTTGGATTGAAAAGGGCACAGTTGTTCATGGTCCC
AATGGCTCTCCGTTTCCGACGTCGGAATATGAACATTCATCAATTCCAGCAACAGTGAAG
AAGATCTTTGATTTGCCATCACCTTTTCTTACTAAAAGAGATGCATGGGCTGGCACTTTT
GAACACATTCTACATATTAGAAAGGTGCCCAGAACTGATTGCCCTGAGAAACTTCCAACT
CCAACAAAGATAAGAAAGGGAGAAGCAAATGAAGATAAAAACATAAGTGAATTCCAGGAA
GAACTAGTGCAACTCGCCGCGGTTCTAAAAGGAGATCATCTCCTAACAAGTTATCCAGAA
AAGATAGGCAAAGGAATGACTGTAAGAGAAGGGAAAGCTTATATGGAAGACGCGGTTAAA
CGCTTCTTTGAAGCTGGATTTGCTGCCAAGAAAATTGGTGTTGATGAAGAACAAATTATA
CAAATGAGGCCTTCACTCACTACAAGATCATCATCTACTAATTTGCACCCTTAA