Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058450
CDS Infomation

pacid=37435794 polypeptide=PGSC0003DMP400039354 locus=PGSC0003DMG400022699 ID=PGSC0003DMT400058450.v4.03 annot-version=v4.03
Sequence

ATGGCATCTTCTTCTTCTTCTTCTTTTGTGAGTAATTCACAATACTCTCCTCGATGGAAG
TATGATGTGTTTTTAAGTTTTAGAGGTAAAGATACTCGTAAAACCTTTACGAGTCACTTG
TACCAAGGTTTGAAATACAAGGGAATATTGACCTTTCAAGATGATAAAAGGCTAGAGCAC
GGCGATTCTATCTCAGAAGAACTCTTGAAAGCTATTAAGGAGTCTCAAGTTGCCCTTGTA
GTTTTCTCAAAGAATTATGCTACATCAAGGTGGTGCTTGAATGAACTAGTGCAAATCATG
GAATGCTACAAAGATGAAAATGGAAAAACAGTCATACCGGTTTTCCATGATGTGGATCCA
TCACATGTTCGATACCAAAGTGAGAGTTATGCAGAAGCTTTTGCCAAACATGAATTGCAG
TTTAAGGATGATGTTGAAGGAATGCAGAAGGTGAAAAGATGGAGAACTGCTCTATGTGAG
GCAGCAGATCTGAAAGGACATGACATCCGCCAAGGGGTTGAATCAGAGAATATTCAACTA
ATTGTTAACCAAGTTTCGTCCAAATTATGCAAGACTTCAGTATCTTATTTGCGAGATGTT
GTGGGAATAAACATTCATTTAGAGGAAGTGAAATCCCAACTAAAGCTTGAAATCAATGAT
GTTCGTATTGTGGGGATCTGGGGCATGGGGGGGATTGGTAAAACGACAATAGCAAGGGCA
ATTTTTGACACACTCTCGTATCAGTTTGAAGGTTCTTGTTTCATTGAGGATATTAAAGAA
AACAAATGTGGAATGCATTCTTTGCAAAATATCCTTCTCTCGGAGCTGTTAAGGGAAAAA
GATAATTACGTGAATAATAAGGAGGACGGAAAGCACATGATAGCTCGTAGACTTCCTTTT
AAGAAGGTTTTAGTTGTGCTTGATGACATAGATCACAGAGACCATTTGGATTACCTAGCA
GGGAATCCTAGTTGGTTTGGTGACGGAAGTCGAATTATTGCAACAACTAGAGATAAGCAT
TTGATTGGGAAGAATGATGTAGTATATGAAGTGTCTACACTAGTTGACTGTCACGCTATT
AAATTGTTCAATCAATATGCTTTCAAAGAAGAAGTTCCCGATGAACGTTTTGAGAAGCTT
TCGTTGGAGGTTGTACGTCATGCTAAAGGCCTTCCTTTAGCCCTGAAAGTGTGGGGTTCT
TTCTTACATAAGAGGGACATAACTGAGTGGAGAAGTGCTATAGAGGAAATGAAAAATAAC
TCCAATTCGGAAATCGTTGAGAAGCTTAGAATTAGCTATGATAGACTGGAGACCATACAA
CAAGATATATTTCTAGATATAGCATGTTTCTTTCGAGGGACAGCAAAAGATCACATCATG
CAAATTCTTGAGAGCTGTTATTCTGGAGCAAATATCGGGTTGCGTGTCCTAATTGACAAA
TCTCTCATGTTCATTTCTGAAGATAATACGATTCAAATGCATGACTTGATACAAGAGATG
GGTAAATATGTGGTGAAAATGCAAAAATATTCGGGAGAAGCTAGCAGATTATGGGACAAT
GAAGATTTTGAAGAAGTGATGGTCAACGATACAGGGACAAAAGCAATGGAAGCAATATGG
CTACAAAATATTCAAAACCTATGCTTTAGCGAAAAAGCCATGAAGAATATGAAAAGGCTT
CGGATATTATATATCGGTGGTTTTCAGATACATGTTGATTCCATTGAGTACCTTCCCAAC
AGCTTGCGTTGGCTTGCCTTTTATGACTATCCTTGGGAGTCATTGCCAGAAAATTTTGAA
CCCAAAAGGCTTGTTCATCTTAATCTCCGGTTCAGTTTGGCGTTGCATCATTTATGGACT
GGAACAAAGCATTTGCCGTCTCTAACGACGCTAGATCTCAGCTACTCTAGAAACCTGGTG
CGAACACCAGATTTCACGGGGATGCCAAATTTGGAGTATTTGAATCTATCATATTGTAGT
AATCTTGAAGAGGTTCACCATTCCCTCGGATGTTCAAGAAAACTCAATTTGTTATATTTG
TGTGTTTGTACACTCCTAAAGAGGTTTCCATGTGTTAGCGGGGAATCTCTTGAATATCTG
TATCTACATGATTGCTATAGCTTAGATACATTTCCAGAAATCCTCGGAGGAATGAAGCCG
GGGTTGGAGATTAAGATGGAACGGTCTGGGATAAGGGAACTACCATCATCTATTCAGTAC
CTAACTCACATTACCAAGCTGAACTTAAAAGGCATGAAAAAACTTGTATCTCTTCCGAAC
AGTATTTGCATGGTGAAAAGCTTGGCGGAGATAGATGTGTCGTACTGCTCGAAACTTGAA
AGCTTGCCAGAAGAGATAGGTGATTTATTAAACTTGGAGAAGCTTGATGCCACATACACT
CTAATTTCACGACCTCCATCTTCTATCGTCCGTTTGAACAAGCTTAGGTTCTTGAGTTTT
GCAAAACAATCTTCAGAAGTAGGCCTCGAAGATGGAGTGTTCTTTGTGTTCCCTCGAGTG
AATGAAGGGTTACGCTCATTGGAAAATTTGGATCTTTGTTACTGCAATCTAATAGATGGA
GGACTTCCGGAAGACATTGGATCCTTATCCTCTTTGAAAAAGTTGTATCTCATTGGAAAT
AATTTTGAGTATTTGCCTCGAAGCATAGCTCAACTTGGTGCTCTTCGACTCTTGTACCTA
TCAGATTGTCCTAACCTTAAAGAGTTCCCTCAGGTGAACAACGGATTACGCTCATTGGAA
GATTTGGATCTCAGTCATTGCAATCTAATAGATGGAGGACTTCCGCAAGACATTGGATCC
TTATCCTCTTTGAAAAATTTGCATCTTGATGGAAATAACTTTGAACATTTGCCTCGTAGC
ATAGCTCAACTTGGTGGTCTTCAATACTTGAACGTATCAAATTGCACGAGGCTTAAAGAG
TTGCCAGACTTCATGTTGATGCCTGATTTGTATGTTTTGCATCTGATAGATTGTATGAGT
CTTGAAGAGGTTCATCATTCCCTGGGATTTTTCGAAAAGCTCACTCACTTATTCTTGTAT
AACTGTAAACGCCTTAAGAGGTTTCCAGGTATGTGCATCGATTCCCTTCAATGTATCCGG
ACATGGGGTTGCTCTAGTTTAGAAAGTTTTCCTAAGATCATCGGAAGCATGAAAGTGGAA
TCAGAGATTCACATGTTAGACAGTGTAATGTGTGATCTAAATTTGAATAGTTCATTTCCA
CATTCCTTGTCTCAGAGGATCGTTTCGTTGCAGCATGACATCTCTGATTCAGATTCCTTA
TCACTAATTAGAGTGTTTACGATTGATCATCCCGAGAAGAAGATCCCAAGTTGGTTCCAC
CATCAAGGAATGGATACAAGTGTTGTATCTGTCAATTTGCCTGAAAATTGGTTTGTGCCG
GATAACTTCTTGGGATTTGCTGTATGTTACTCTAGTGAACTAATTAACATCACAGCTCAC
TTGATTCCGTTACGTGATGATGGGCTGTCGTGGATGACCTTGAAACTAAACTTATCCCGC
GGTTCAAAACGTGATGTAGCATACTCTGATTATTCGGAATGTGAGACAGAATCATCTGAC
CATTCAGAATGTGATACTGAACCTACTCTTCATTATTTCTTGGTACCTTTTTCGAGCTTA
TGGAATACATCTAAGGCAAATGGGAAAACACCAAATGACTATGGGCTCATTACGTTATCT
TTTTCTGGAGAAATGAAGAAGTTTGGATGTCGTTTGTTGTATAAAGATGAGCCTGAGCTT
GTTGAGACCTTGTTACAGATGAGGGAAAACAACGATGAACCAACAGAACGTTACATTGGG
ATCAGGAGCAGTAGATATAACAATAGTGAACATCATGACTCCGTCACCAATGAAGCCAGT
TGCAATGATGTATCACAGATATAA

Peptide Sequence

PEP ID

PGSC0003DMP400039354
PEP Infomation

pacid=37435794 transcript=PGSC0003DMT400058450 locus=PGSC0003DMG400022699 ID=PGSC0003DMT400058450.v4.03 annot-version=v4.03
Sequence

MASSSSSSFVSNSQYSPRWKYDVFLSFRGKDTRKTFTSHLYQGLKYKGILTFQDDKRLEH
GDSISEELLKAIKESQVALVVFSKNYATSRWCLNELVQIMECYKDENGKTVIPVFHDVDP
SHVRYQSESYAEAFAKHELQFKDDVEGMQKVKRWRTALCEAADLKGHDIRQGVESENIQL
IVNQVSSKLCKTSVSYLRDVVGINIHLEEVKSQLKLEINDVRIVGIWGMGGIGKTTIARA
IFDTLSYQFEGSCFIEDIKENKCGMHSLQNILLSELLREKDNYVNNKEDGKHMIARRLPF
KKVLVVLDDIDHRDHLDYLAGNPSWFGDGSRIIATTRDKHLIGKNDVVYEVSTLVDCHAI
KLFNQYAFKEEVPDERFEKLSLEVVRHAKGLPLALKVWGSFLHKRDITEWRSAIEEMKNN
SNSEIVEKLRISYDRLETIQQDIFLDIACFFRGTAKDHIMQILESCYSGANIGLRVLIDK
SLMFISEDNTIQMHDLIQEMGKYVVKMQKYSGEASRLWDNEDFEEVMVNDTGTKAMEAIW
LQNIQNLCFSEKAMKNMKRLRILYIGGFQIHVDSIEYLPNSLRWLAFYDYPWESLPENFE
PKRLVHLNLRFSLALHHLWTGTKHLPSLTTLDLSYSRNLVRTPDFTGMPNLEYLNLSYCS
NLEEVHHSLGCSRKLNLLYLCVCTLLKRFPCVSGESLEYLYLHDCYSLDTFPEILGGMKP
GLEIKMERSGIRELPSSIQYLTHITKLNLKGMKKLVSLPNSICMVKSLAEIDVSYCSKLE
SLPEEIGDLLNLEKLDATYTLISRPPSSIVRLNKLRFLSFAKQSSEVGLEDGVFFVFPRV
NEGLRSLENLDLCYCNLIDGGLPEDIGSLSSLKKLYLIGNNFEYLPRSIAQLGALRLLYL
SDCPNLKEFPQVNNGLRSLEDLDLSHCNLIDGGLPQDIGSLSSLKNLHLDGNNFEHLPRS
IAQLGGLQYLNVSNCTRLKELPDFMLMPDLYVLHLIDCMSLEEVHHSLGFFEKLTHLFLY
NCKRLKRFPGMCIDSLQCIRTWGCSSLESFPKIIGSMKVESEIHMLDSVMCDLNLNSSFP
HSLSQRIVSLQHDISDSDSLSLIRVFTIDHPEKKIPSWFHHQGMDTSVVSVNLPENWFVP
DNFLGFAVCYSSELINITAHLIPLRDDGLSWMTLKLNLSRGSKRDVAYSDYSECETESSD
HSECDTEPTLHYFLVPFSSLWNTSKANGKTPNDYGLITLSFSGEMKKFGCRLLYKDEPEL
VETLLQMRENNDEPTERYIGIRSSRYNNSEHHDSVTNEASCNDVSQI*

Transcript Sequence

Transcript ID

PGSC0003DMT400058450
Transcript Infomation

pacid=37435794 locus=PGSC0003DMG400022699 ID=PGSC0003DMT400058450.v4.03 annot-version=v4.03
Sequence

ATGGCATCTTCTTCTTCTTCTTCTTTTGTGAGTAATTCACAATACTCTCCTCGATGGAAG
TATGATGTGTTTTTAAGTTTTAGAGGTAAAGATACTCGTAAAACCTTTACGAGTCACTTG
TACCAAGGTTTGAAATACAAGGGAATATTGACCTTTCAAGATGATAAAAGGCTAGAGCAC
GGCGATTCTATCTCAGAAGAACTCTTGAAAGCTATTAAGGAGTCTCAAGTTGCCCTTGTA
GTTTTCTCAAAGAATTATGCTACATCAAGGTGGTGCTTGAATGAACTAGTGCAAATCATG
GAATGCTACAAAGATGAAAATGGAAAAACAGTCATACCGGTTTTCCATGATGTGGATCCA
TCACATGTTCGATACCAAAGTGAGAGTTATGCAGAAGCTTTTGCCAAACATGAATTGCAG
TTTAAGGATGATGTTGAAGGAATGCAGAAGGTGAAAAGATGGAGAACTGCTCTATGTGAG
GCAGCAGATCTGAAAGGACATGACATCCGCCAAGGGGTTGAATCAGAGAATATTCAACTA
ATTGTTAACCAAGTTTCGTCCAAATTATGCAAGACTTCAGTATCTTATTTGCGAGATGTT
GTGGGAATAAACATTCATTTAGAGGAAGTGAAATCCCAACTAAAGCTTGAAATCAATGAT
GTTCGTATTGTGGGGATCTGGGGCATGGGGGGGATTGGTAAAACGACAATAGCAAGGGCA
ATTTTTGACACACTCTCGTATCAGTTTGAAGGTTCTTGTTTCATTGAGGATATTAAAGAA
AACAAATGTGGAATGCATTCTTTGCAAAATATCCTTCTCTCGGAGCTGTTAAGGGAAAAA
GATAATTACGTGAATAATAAGGAGGACGGAAAGCACATGATAGCTCGTAGACTTCCTTTT
AAGAAGGTTTTAGTTGTGCTTGATGACATAGATCACAGAGACCATTTGGATTACCTAGCA
GGGAATCCTAGTTGGTTTGGTGACGGAAGTCGAATTATTGCAACAACTAGAGATAAGCAT
TTGATTGGGAAGAATGATGTAGTATATGAAGTGTCTACACTAGTTGACTGTCACGCTATT
AAATTGTTCAATCAATATGCTTTCAAAGAAGAAGTTCCCGATGAACGTTTTGAGAAGCTT
TCGTTGGAGGTTGTACGTCATGCTAAAGGCCTTCCTTTAGCCCTGAAAGTGTGGGGTTCT
TTCTTACATAAGAGGGACATAACTGAGTGGAGAAGTGCTATAGAGGAAATGAAAAATAAC
TCCAATTCGGAAATCGTTGAGAAGCTTAGAATTAGCTATGATAGACTGGAGACCATACAA
CAAGATATATTTCTAGATATAGCATGTTTCTTTCGAGGGACAGCAAAAGATCACATCATG
CAAATTCTTGAGAGCTGTTATTCTGGAGCAAATATCGGGTTGCGTGTCCTAATTGACAAA
TCTCTCATGTTCATTTCTGAAGATAATACGATTCAAATGCATGACTTGATACAAGAGATG
GGTAAATATGTGGTGAAAATGCAAAAATATTCGGGAGAAGCTAGCAGATTATGGGACAAT
GAAGATTTTGAAGAAGTGATGGTCAACGATACAGGGACAAAAGCAATGGAAGCAATATGG
CTACAAAATATTCAAAACCTATGCTTTAGCGAAAAAGCCATGAAGAATATGAAAAGGCTT
CGGATATTATATATCGGTGGTTTTCAGATACATGTTGATTCCATTGAGTACCTTCCCAAC
AGCTTGCGTTGGCTTGCCTTTTATGACTATCCTTGGGAGTCATTGCCAGAAAATTTTGAA
CCCAAAAGGCTTGTTCATCTTAATCTCCGGTTCAGTTTGGCGTTGCATCATTTATGGACT
GGAACAAAGCATTTGCCGTCTCTAACGACGCTAGATCTCAGCTACTCTAGAAACCTGGTG
CGAACACCAGATTTCACGGGGATGCCAAATTTGGAGTATTTGAATCTATCATATTGTAGT
AATCTTGAAGAGGTTCACCATTCCCTCGGATGTTCAAGAAAACTCAATTTGTTATATTTG
TGTGTTTGTACACTCCTAAAGAGGTTTCCATGTGTTAGCGGGGAATCTCTTGAATATCTG
TATCTACATGATTGCTATAGCTTAGATACATTTCCAGAAATCCTCGGAGGAATGAAGCCG
GGGTTGGAGATTAAGATGGAACGGTCTGGGATAAGGGAACTACCATCATCTATTCAGTAC
CTAACTCACATTACCAAGCTGAACTTAAAAGGCATGAAAAAACTTGTATCTCTTCCGAAC
AGTATTTGCATGGTGAAAAGCTTGGCGGAGATAGATGTGTCGTACTGCTCGAAACTTGAA
AGCTTGCCAGAAGAGATAGGTGATTTATTAAACTTGGAGAAGCTTGATGCCACATACACT
CTAATTTCACGACCTCCATCTTCTATCGTCCGTTTGAACAAGCTTAGGTTCTTGAGTTTT
GCAAAACAATCTTCAGAAGTAGGCCTCGAAGATGGAGTGTTCTTTGTGTTCCCTCGAGTG
AATGAAGGGTTACGCTCATTGGAAAATTTGGATCTTTGTTACTGCAATCTAATAGATGGA
GGACTTCCGGAAGACATTGGATCCTTATCCTCTTTGAAAAAGTTGTATCTCATTGGAAAT
AATTTTGAGTATTTGCCTCGAAGCATAGCTCAACTTGGTGCTCTTCGACTCTTGTACCTA
TCAGATTGTCCTAACCTTAAAGAGTTCCCTCAGGTGAACAACGGATTACGCTCATTGGAA
GATTTGGATCTCAGTCATTGCAATCTAATAGATGGAGGACTTCCGCAAGACATTGGATCC
TTATCCTCTTTGAAAAATTTGCATCTTGATGGAAATAACTTTGAACATTTGCCTCGTAGC
ATAGCTCAACTTGGTGGTCTTCAATACTTGAACGTATCAAATTGCACGAGGCTTAAAGAG
TTGCCAGACTTCATGTTGATGCCTGATTTGTATGTTTTGCATCTGATAGATTGTATGAGT
CTTGAAGAGGTTCATCATTCCCTGGGATTTTTCGAAAAGCTCACTCACTTATTCTTGTAT
AACTGTAAACGCCTTAAGAGGTTTCCAGGTATGTGCATCGATTCCCTTCAATGTATCCGG
ACATGGGGTTGCTCTAGTTTAGAAAGTTTTCCTAAGATCATCGGAAGCATGAAAGTGGAA
TCAGAGATTCACATGTTAGACAGTGTAATGTGTGATCTAAATTTGAATAGTTCATTTCCA
CATTCCTTGTCTCAGAGGATCGTTTCGTTGCAGCATGACATCTCTGATTCAGATTCCTTA
TCACTAATTAGAGTGTTTACGATTGATCATCCCGAGAAGAAGATCCCAAGTTGGTTCCAC
CATCAAGGAATGGATACAAGTGTTGTATCTGTCAATTTGCCTGAAAATTGGTTTGTGCCG
GATAACTTCTTGGGATTTGCTGTATGTTACTCTAGTGAACTAATTAACATCACAGCTCAC
TTGATTCCGTTACGTGATGATGGGCTGTCGTGGATGACCTTGAAACTAAACTTATCCCGC
GGTTCAAAACGTGATGTAGCATACTCTGATTATTCGGAATGTGAGACAGAATCATCTGAC
CATTCAGAATGTGATACTGAACCTACTCTTCATTATTTCTTGGTACCTTTTTCGAGCTTA
TGGAATACATCTAAGGCAAATGGGAAAACACCAAATGACTATGGGCTCATTACGTTATCT
TTTTCTGGAGAAATGAAGAAGTTTGGATGTCGTTTGTTGTATAAAGATGAGCCTGAGCTT
GTTGAGACCTTGTTACAGATGAGGGAAAACAACGATGAACCAACAGAACGTTACATTGGG
ATCAGGAGCAGTAGATATAACAATAGTGAACATCATGACTCCGTCACCAATGAAGCCAGT
TGCAATGATGTATCACAGATATAA