Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058444
CDS Infomation

pacid=37439774 polypeptide=PGSC0003DMP400039351 locus=PGSC0003DMG400022695 ID=PGSC0003DMT400058444.v4.03 annot-version=v4.03
Sequence

ATGGCCTCCAAGGATGAACATAAGGAAAATGAGGCAGTCGAGGAACCCTCAGAAATTCCC
AGAGATGAAAAATCGATCAACCCAGTGGGTGAAAGTTCTGTTGTCTTGCCGCGTGTTGTG
CGTATTTACATGCCAGACAGTGACGCCACAGACTCATCTAGTGACGAGGAGGAAAAGCTT
CAAGGAGAGAAGTCCAAGAGACATGAAAGGACGTGTATAAAGGAAATCATCATTGAGAAT
GGGAAGACCAGGGTCATTTGCAAGAAGACGTCCAAAGAGAAGAAAGATATAAAGCTGTTC
CAAGAAAATGCGAAGAAGTACAAAGGAGTTAGACAACGGAGATGGGGCAAATGGGCAGCA
GAGATCCGAGACACAAAAAACAAAACTCGACTTTGGCTGGGCACTTTTGACACTGCTGAA
GAAGCTGCTTTGGCTTATGATAAGGCAGCCATTGAAATCAGAGCAATGACCTCCAAGGAA
GATCTTCAGGTAAAAGAGGGAGTCATAGAACCCTCAGCAATTGACGTAGTCGAAAAATCC
AGCAATCAAGTGGGCGAAATTTCCCAAGTCTTTCCGCGTCTTGTACGTATTCACGTGCCG
GACCATGACACAACAGACTCGTCTAGTGACGAGGAGGAGAAGGATGAAGAAGGGAAGTCC
GAGGGACATGAAAGAACGTGTGTAAAGGAAATCATTATCGAGAATGGAAAGACCAAGGTC
ATTTCAAAGAAGAAGTCCAAAGAGAAGAAAGATTTAAATCTGATGCAAGAAGATGTGAAT
AAGTACAGGGGGGTTAGACGGCGAAAATGGGGCAAGTGGGCAGCAGAGATTCGAGATACA
AGAAAGAAAACTCGGCTTTGGTTGGGAACTTTTGACACTGCTTTAGAAGCTGCTTTGGCA
TATGACAAGGCAGCCATTGAAATAAGAGGTGCCAATGCTCTGACAAACATCCTCAAGCCA
CCAGCGAAGAAAAACAACCCCATCAAGATCAACTTCATCGTGCCACCACTAAAAAGACAG
AAGGCGGATCCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400039351
PEP Infomation

pacid=37439774 transcript=PGSC0003DMT400058444 locus=PGSC0003DMG400022695 ID=PGSC0003DMT400058444.v4.03 annot-version=v4.03
Sequence

MASKDEHKENEAVEEPSEIPRDEKSINPVGESSVVLPRVVRIYMPDSDATDSSSDEEEKL
QGEKSKRHERTCIKEIIIENGKTRVICKKTSKEKKDIKLFQENAKKYKGVRQRRWGKWAA
EIRDTKNKTRLWLGTFDTAEEAALAYDKAAIEIRAMTSKEDLQVKEGVIEPSAIDVVEKS
SNQVGEISQVFPRLVRIHVPDHDTTDSSSDEEEKDEEGKSEGHERTCVKEIIIENGKTKV
ISKKKSKEKKDLNLMQEDVNKYRGVRRRKWGKWAAEIRDTRKKTRLWLGTFDTALEAALA
YDKAAIEIRGANALTNILKPPAKKNNPIKINFIVPPLKRQKADP*

Transcript Sequence

Transcript ID

PGSC0003DMT400058444
Transcript Infomation

pacid=37439774 locus=PGSC0003DMG400022695 ID=PGSC0003DMT400058444.v4.03 annot-version=v4.03
Sequence

ATGGCCTCCAAGGATGAACATAAGGAAAATGAGGCAGTCGAGGAACCCTCAGAAATTCCC
AGAGATGAAAAATCGATCAACCCAGTGGGTGAAAGTTCTGTTGTCTTGCCGCGTGTTGTG
CGTATTTACATGCCAGACAGTGACGCCACAGACTCATCTAGTGACGAGGAGGAAAAGCTT
CAAGGAGAGAAGTCCAAGAGACATGAAAGGACGTGTATAAAGGAAATCATCATTGAGAAT
GGGAAGACCAGGGTCATTTGCAAGAAGACGTCCAAAGAGAAGAAAGATATAAAGCTGTTC
CAAGAAAATGCGAAGAAGTACAAAGGAGTTAGACAACGGAGATGGGGCAAATGGGCAGCA
GAGATCCGAGACACAAAAAACAAAACTCGACTTTGGCTGGGCACTTTTGACACTGCTGAA
GAAGCTGCTTTGGCTTATGATAAGGCAGCCATTGAAATCAGAGCAATGACCTCCAAGGAA
GATCTTCAGGTAAAAGAGGGAGTCATAGAACCCTCAGCAATTGACGTAGTCGAAAAATCC
AGCAATCAAGTGGGCGAAATTTCCCAAGTCTTTCCGCGTCTTGTACGTATTCACGTGCCG
GACCATGACACAACAGACTCGTCTAGTGACGAGGAGGAGAAGGATGAAGAAGGGAAGTCC
GAGGGACATGAAAGAACGTGTGTAAAGGAAATCATTATCGAGAATGGAAAGACCAAGGTC
ATTTCAAAGAAGAAGTCCAAAGAGAAGAAAGATTTAAATCTGATGCAAGAAGATGTGAAT
AAGTACAGGGGGGTTAGACGGCGAAAATGGGGCAAGTGGGCAGCAGAGATTCGAGATACA
AGAAAGAAAACTCGGCTTTGGTTGGGAACTTTTGACACTGCTTTAGAAGCTGCTTTGGCA
TATGACAAGGCAGCCATTGAAATAAGAGGTGCCAATGCTCTGACAAACATCCTCAAGCCA
CCAGCGAAGAAAAACAACCCCATCAAGATCAACTTCATCGTGCCACCACTAAAAAGACAG
AAGGCGGATCCATAG