Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058381
CDS Infomation

pacid=37437416 polypeptide=PGSC0003DMP400039308 locus=PGSC0003DMG400022678 ID=PGSC0003DMT400058381.v4.03 annot-version=v4.03
Sequence

ATGTCTCTTTTTGCTCCTTCCAGTGGACTCACACTTCTTCAATCAACTAAAGATCATTAC
TTTAGGCAACTTTTTTCATCTCATTTCATCAATCATGTTCAGGTAAGAACAGTCCCTTAT
GCTACTCCTTTTCTTTCTGTCAATGTATCTGGAAGACCCTTTAGAGTTAGTTCAAGAAAA
CTTAAACCCATCATAGCTTCAGCTGCCTCTACTGTTGAAACCTCCAACATTTCTTTCAGA
GGTAAAAATCCAAAAGATATCAATGTTTTGGTTGTGGGTTCAACTGGGTACATTGGGAAA
TTTGTGGTTAAGGAGTTAACCAGTAGAGGCTTCAATGCTATAGCTGTGGCTAGAGAAAAA
AGTGGTATTAAAGGAAAGAATAGTAAAGATGATACCTTGGAACAGTTAAATGGAGCTAAT
GTGTGTTTTTCTGATGTTACCAATTTGGAGACTTTGGAGAAAAGTGTACAAGGTTTAGGG
GTTTCAATTGATGTTGTTGTGTCTTGCCTTGCTAGTCGAAATGGTGGGGTAAAAGATTCT
TGGAATATTGATTATGAGGCCACAAAGAATAGTCTTGTTGCTGGGAGGAAGTTTGGGGCT
TCACACTTTGTTTTGCTGTCTGCAATTTGTGTGCAAAAGCCCCTTCTTGAATTTCAAAGA
GCTAAGCTGAAATTCGAGGCGGAATTGATGAAAGAAGCTGAAGAAGATAATGGATTTACT
TATAGTATTGTTAGACCTACTGCATTTTTCAAGAGCTTAGGAGGTCAAGTTGAATTGGTG
AAAGATGGGAAACCTTATGTGATGTTTGGGGATGGAAAGTTGTGTGCTTGCAAGCCGATA
AGTGAGCAAGATTTAGCTTCTTTTATTGCTGATTGTGTACTGAAAGAGGATAAAATCAAT
CAGGTCTTGCCAATTGGAGGACCTGGGAAGGCATTGACACCATTAGAACAAGGGGAAATG
TTGTTTAAACTTGTGGGGAAAGAACCCAAATTTCTCAAGGTGCCAATTGAAATAATGGAT
TTTGCAATAGGATTTCTTGACTTCCTTGTAAAAATATTTCCTTCGTTGGAAGATGCGGCC
GAGTTTGGGAAGATTGGTAGGTATTATGCAGCTGAGAGCATGTTGATTTGGGATCCTGAG
ACTGGTGAATATAATGCTGAGGCAACACCAAGTTATGGAAATGATACATTGGAAGATTTT
TTCCAAAGAGTACTGAAAGAAGGAATGACTGGTCAGGAGTTGGGGGAGCAAACAATATTC
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400039308
PEP Infomation

pacid=37437416 transcript=PGSC0003DMT400058381 locus=PGSC0003DMG400022678 ID=PGSC0003DMT400058381.v4.03 annot-version=v4.03
Sequence

MSLFAPSSGLTLLQSTKDHYFRQLFSSHFINHVQVRTVPYATPFLSVNVSGRPFRVSSRK
LKPIIASAASTVETSNISFRGKNPKDINVLVVGSTGYIGKFVVKELTSRGFNAIAVAREK
SGIKGKNSKDDTLEQLNGANVCFSDVTNLETLEKSVQGLGVSIDVVVSCLASRNGGVKDS
WNIDYEATKNSLVAGRKFGASHFVLLSAICVQKPLLEFQRAKLKFEAELMKEAEEDNGFT
YSIVRPTAFFKSLGGQVELVKDGKPYVMFGDGKLCACKPISEQDLASFIADCVLKEDKIN
QVLPIGGPGKALTPLEQGEMLFKLVGKEPKFLKVPIEIMDFAIGFLDFLVKIFPSLEDAA
EFGKIGRYYAAESMLIWDPETGEYNAEATPSYGNDTLEDFFQRVLKEGMTGQELGEQTIF
*

Transcript Sequence

Transcript ID

PGSC0003DMT400058381
Transcript Infomation

pacid=37437416 locus=PGSC0003DMG400022678 ID=PGSC0003DMT400058381.v4.03 annot-version=v4.03
Sequence

ATGTCTCTTTTTGCTCCTTCCAGTGGACTCACACTTCTTCAATCAACTAAAGATCATTAC
TTTAGGCAACTTTTTTCATCTCATTTCATCAATCATGTTCAGGTAAGAACAGTCCCTTAT
GCTACTCCTTTTCTTTCTGTCAATGTATCTGGAAGACCCTTTAGAGTTAGTTCAAGAAAA
CTTAAACCCATCATAGCTTCAGCTGCCTCTACTGTTGAAACCTCCAACATTTCTTTCAGA
GGTAAAAATCCAAAAGATATCAATGTTTTGGTTGTGGGTTCAACTGGGTACATTGGGAAA
TTTGTGGTTAAGGAGTTAACCAGTAGAGGCTTCAATGCTATAGCTGTGGCTAGAGAAAAA
AGTGGTATTAAAGGAAAGAATAGTAAAGATGATACCTTGGAACAGTTAAATGGAGCTAAT
GTGTGTTTTTCTGATGTTACCAATTTGGAGACTTTGGAGAAAAGTGTACAAGGTTTAGGG
GTTTCAATTGATGTTGTTGTGTCTTGCCTTGCTAGTCGAAATGGTGGGGTAAAAGATTCT
TGGAATATTGATTATGAGGCCACAAAGAATAGTCTTGTTGCTGGGAGGAAGTTTGGGGCT
TCACACTTTGTTTTGCTGTCTGCAATTTGTGTGCAAAAGCCCCTTCTTGAATTTCAAAGA
GCTAAGCTGAAATTCGAGGCGGAATTGATGAAAGAAGCTGAAGAAGATAATGGATTTACT
TATAGTATTGTTAGACCTACTGCATTTTTCAAGAGCTTAGGAGGTCAAGTTGAATTGGTG
AAAGATGGGAAACCTTATGTGATGTTTGGGGATGGAAAGTTGTGTGCTTGCAAGCCGATA
AGTGAGCAAGATTTAGCTTCTTTTATTGCTGATTGTGTACTGAAAGAGGATAAAATCAAT
CAGGTCTTGCCAATTGGAGGACCTGGGAAGGCATTGACACCATTAGAACAAGGGGAAATG
TTGTTTAAACTTGTGGGGAAAGAACCCAAATTTCTCAAGGTGCCAATTGAAATAATGGAT
TTTGCAATAGGATTTCTTGACTTCCTTGTAAAAATATTTCCTTCGTTGGAAGATGCGGCC
GAGTTTGGGAAGATTGGTAGGTATTATGCAGCTGAGAGCATGTTGATTTGGGATCCTGAG
ACTGGTGAATATAATGCTGAGGCAACACCAAGTTATGGAAATGATACATTGGAAGATTTT
TTCCAAAGAGTACTGAAAGAAGGAATGACTGGTCAGGAGTTGGGGGAGCAAACAATATTC
TAA