Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058360
CDS Infomation

pacid=37436450 polypeptide=PGSC0003DMP400039288 locus=PGSC0003DMG400022669 ID=PGSC0003DMT400058360.v4.03 annot-version=v4.03
Sequence

ATGGCAAGCTTGACGGGTGCACCATCGAAGAAGACCAGTAAAGGAAGTTCAAGTACACAA
TCAGTAAAATTTGCACGTAGAACGTCCAGTGGACGATATGTTAGCATGTCGAGAGAAGAT
ATTGATTTGTCGGGTGAATTGTCAAGAGATTACATGAATTATACTGTTCAAATCCCGCCT
ACGCCTGATAATCAGCCAATGGATATGTCTATTGCTGCTAAAGCAGAAGAGCAATATGTT
TCTAATTCATTATTTACAGGTGGATTCAACAGCGTCACTCGCGCACATCTTATGGATAAG
ATCATTGAATCCGAAGTTTATCATCCTCAAATGGCTGGATCCAAAGGATCATCATGTTCC
ATGCCTGCTTGTGATGGAAAGATCATGAAAGATGAAAGGGGTAATGATGTCATCCCATGT
GAATGCAGGTTCAAAATATGTAGAGATTGTTACATGGATGCACAAAAAGACGTTGGTCTA
TGCCCCGGTTGCAAAGAAGCTTACAAGGTAGGGGATCTTGATGACGAGATCCCAAATTTT
TCTAATGGAGCATTGTCATTACCGGCACCAGATGGTTCGAAAGGTATGATTAGGAGAAAT
CAAAATGGAGAGTTTGATCACAACAAATGGTTGTTCGAGACACAAGGCACTTACGGGTAT
GGAAATGCTTATTGGCCTGATGATAGGGATGGAGATGATGGTGATAGAAGTATGCCTAAG
ACCATGTTGGATACATCTGCTGATATACCTTGGAAACCCCTCAGTAGGGTGTTGCCAATG
TCACATAGCATCATTAGCCCTTATAGGTTGCTAATTTTTATTCGACTAGTACTACTAGGA
TTCTTCTTGGCATGGAGAATACAACATCCAAACCCGGAGGCAATGTGGTTATACGTGATG
TCAATTATATGTGAAGTATGGTTTGCATTTTCATGGTTTCTGGATCAGATGCCCAGGATA
TCACCAGTTAATCGGTCTACTGACCTAGTGGTACTACGCGAGAAATTTGAAATGCCATCA
CCCTCCAATCCTTTAGGTAGGTCAGATCTACCAGGAGTTGATATATTTGTATCAACGGCT
GATCCAGAGAAAGAGCCGCCCCTTGTCACAGCCAACACCGTCCTATCCATCTTAGCAGCT
GACTATCCCGTGGAGAAGTTAGCTTGCTATGTCTCAGACGATGGCGGTACCCTTCTAACA
TTTGAGGCAATGGCAGAAGCTACTAGCTTTGCTGATTTGTGGGTACCATTCTGCAGGAAA
CATGCTATTGAGCCTAGGAATCCTGAAGCCTATTTTCTCCTCAAGGGAGACCCTACAAAG
AACAAGAAGAGAGGTGATTTCGTCAAAGATAGACGAAGGGTAAAAAGAGAATATGATGAA
TTTAAGGTAAGAATAAACAGTCTGCAAGATTCAATAAGAAGGAGATCAGACGCGTTTAAT
GCTCGAGAAGAAATGAAGATGTTAAAGCAGATGAAAGAGAATGAGACTGATCCTGCAGAG
GCAATCAAAGTGCAAAAGGCTATTTGGATGGCTGATGGAACTCACTGGCCGGGCTCATGG
TCTATCCCCAGCAGGGATCATCGCAATGGTGATCATCCCGGGATCCTTCAGGTAATGTTG
AAACCCCCAAGTAGTGATCCTCTAATGGGAGGGGGTGATCAAGATAAGCTATTAGATTTT
TCGGACGTGGACATAAGGCTTCCAATGTTTGTGTATGTGTCGCGTGAGAAGAGACGTGAG
TATGATTACAATAAAAAAGCAGGTGCCATGAATGCCCTAGTAAGAGCTTCTGCCATTTTA
TCTAATGGTGCATTCATACTCAACCTTAATTATGATCACTATATATACAACTGCTTAGCT
ATTCGTGAAGGCATGTGTTTCATGATGGACAGAGGTGGAGAAGACATATGTTTTATTCAA
TTCCCTCAACGATTTGAAGGAATCGATCCCTCTGATCGTTATGCCAATCACAACACTGTG
TTTTTTGATGGAAATATGCGCGCCCTTGATGGTCTGCAGGGTCCTATGTACGTTGGGACG
GGCTGCATGTTTAGGCGATTTGCACTTTATGGATTCGAACCAACAAAACCAGATAAGACA
CCACAGAAAGATGCAGAGGCTGAAGCATTGAAAGCCACAGAAGTTGATTATGACTTCGAT
GTGAATATACTAACTAAGAAATTTGGTAACTCCACAATGTTAGCTGAATCTATTCCAATT
GCTGAGTTCCAAGGTCGTCCTATCGCTGATCACCCTGCTGTCAAGTTTGGACGACCTCCT
GGTGCTCTTAGAACCCCAAAGGAACCACTTGATGCCACTAACGTAGCCGAAGCAGTCTCT
GTTATATCTTGTTGGTATGAAGAAAATACAGAGTGGGGTACTCGAATGGGATGGATTTAT
GGTTCAGTGATGGAAGGTGTGGTTACTGGATACCGGATGCACAATCTTGGATGGCGTTCT
ATATATTGCATCACCAAACGCGATGCATTCCGTGGATCAGCTCCTATAAATCTAACAGAT
AGACTACATCAAGTACTCCGTTGGGCTATAGGTTCAGTTGAAATCTTTTACTCAAGAAAC
AATGCAATTCTTGCATCGCGAAAACTCAAATTCCTCCAACGTCTTGCTTACCTTAACGTT
AGCATTTATCCTTTCACTTCATTTTTCCTCGTCGTCTTCTGTTTTCTCCCTGCACTCTGC
CTCATATCCGGTCAATTCATTGTCCAAAATTTCAACGTCGCGTTCCTAGTATATCTATTA
ACCATATCTATCTGTATCATTGGTTCAGCTATCTTAGAGGTAAAATGGTCAGGGGTTGCT
TTAGAGGATTGGTGGAGAAATGAACAATTTTGGGTTATTTCAGGTACTAGTTCTCATCTT
GCTGCTGTTGTGCTAGGTCTACTTAAAGTATTCATGGGATGTGAAACATCATTTACTCCT
ACATCTAAATCCATTGGAGAAGACGTTGATGAAGCGTATGCTGAATTGTACATGGTGAAA
TGGACACCATTGATGATACCACCTATCGTCATTGGTATGGTTAACATAATTGCAGTTGTT
GTTGCATTTTCTAGAGCGATATTCGCCATTGTACCTCAATGGGGAAAATTCATTGGTGGT
GCATTTTTCGCGTTTTGGGTGTTGGCTCACTTGTATCCTTTTGCTAAAGGACTGATGGGT
AAAAGAAGAAAAACACCCACAATTGTGTTTGTTTGGTCAGGTCTCATTGCAATAACAATC
TCATTGCTATGGATAGCTTTTGGTAACCCACAAGCTGGTCCTGGTGCTGTACAAGGGGTT
GCTGGTGGTGGCTTTCAATTTCCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400039288
PEP Infomation

pacid=37436450 transcript=PGSC0003DMT400058360 locus=PGSC0003DMG400022669 ID=PGSC0003DMT400058360.v4.03 annot-version=v4.03
Sequence

MASLTGAPSKKTSKGSSSTQSVKFARRTSSGRYVSMSREDIDLSGELSRDYMNYTVQIPP
TPDNQPMDMSIAAKAEEQYVSNSLFTGGFNSVTRAHLMDKIIESEVYHPQMAGSKGSSCS
MPACDGKIMKDERGNDVIPCECRFKICRDCYMDAQKDVGLCPGCKEAYKVGDLDDEIPNF
SNGALSLPAPDGSKGMIRRNQNGEFDHNKWLFETQGTYGYGNAYWPDDRDGDDGDRSMPK
TMLDTSADIPWKPLSRVLPMSHSIISPYRLLIFIRLVLLGFFLAWRIQHPNPEAMWLYVM
SIICEVWFAFSWFLDQMPRISPVNRSTDLVVLREKFEMPSPSNPLGRSDLPGVDIFVSTA
DPEKEPPLVTANTVLSILAADYPVEKLACYVSDDGGTLLTFEAMAEATSFADLWVPFCRK
HAIEPRNPEAYFLLKGDPTKNKKRGDFVKDRRRVKREYDEFKVRINSLQDSIRRRSDAFN
AREEMKMLKQMKENETDPAEAIKVQKAIWMADGTHWPGSWSIPSRDHRNGDHPGILQVML
KPPSSDPLMGGGDQDKLLDFSDVDIRLPMFVYVSREKRREYDYNKKAGAMNALVRASAIL
SNGAFILNLNYDHYIYNCLAIREGMCFMMDRGGEDICFIQFPQRFEGIDPSDRYANHNTV
FFDGNMRALDGLQGPMYVGTGCMFRRFALYGFEPTKPDKTPQKDAEAEALKATEVDYDFD
VNILTKKFGNSTMLAESIPIAEFQGRPIADHPAVKFGRPPGALRTPKEPLDATNVAEAVS
VISCWYEENTEWGTRMGWIYGSVMEGVVTGYRMHNLGWRSIYCITKRDAFRGSAPINLTD
RLHQVLRWAIGSVEIFYSRNNAILASRKLKFLQRLAYLNVSIYPFTSFFLVVFCFLPALC
LISGQFIVQNFNVAFLVYLLTISICIIGSAILEVKWSGVALEDWWRNEQFWVISGTSSHL
AAVVLGLLKVFMGCETSFTPTSKSIGEDVDEAYAELYMVKWTPLMIPPIVIGMVNIIAVV
VAFSRAIFAIVPQWGKFIGGAFFAFWVLAHLYPFAKGLMGKRRKTPTIVFVWSGLIAITI
SLLWIAFGNPQAGPGAVQGVAGGGFQFP*

Transcript Sequence

Transcript ID

PGSC0003DMT400058360
Transcript Infomation

pacid=37436450 locus=PGSC0003DMG400022669 ID=PGSC0003DMT400058360.v4.03 annot-version=v4.03
Sequence

ATGGCAAGCTTGACGGGTGCACCATCGAAGAAGACCAGTAAAGGAAGTTCAAGTACACAA
TCAGTAAAATTTGCACGTAGAACGTCCAGTGGACGATATGTTAGCATGTCGAGAGAAGAT
ATTGATTTGTCGGGTGAATTGTCAAGAGATTACATGAATTATACTGTTCAAATCCCGCCT
ACGCCTGATAATCAGCCAATGGATATGTCTATTGCTGCTAAAGCAGAAGAGCAATATGTT
TCTAATTCATTATTTACAGGTGGATTCAACAGCGTCACTCGCGCACATCTTATGGATAAG
ATCATTGAATCCGAAGTTTATCATCCTCAAATGGCTGGATCCAAAGGATCATCATGTTCC
ATGCCTGCTTGTGATGGAAAGATCATGAAAGATGAAAGGGGTAATGATGTCATCCCATGT
GAATGCAGGTTCAAAATATGTAGAGATTGTTACATGGATGCACAAAAAGACGTTGGTCTA
TGCCCCGGTTGCAAAGAAGCTTACAAGGTAGGGGATCTTGATGACGAGATCCCAAATTTT
TCTAATGGAGCATTGTCATTACCGGCACCAGATGGTTCGAAAGGTATGATTAGGAGAAAT
CAAAATGGAGAGTTTGATCACAACAAATGGTTGTTCGAGACACAAGGCACTTACGGGTAT
GGAAATGCTTATTGGCCTGATGATAGGGATGGAGATGATGGTGATAGAAGTATGCCTAAG
ACCATGTTGGATACATCTGCTGATATACCTTGGAAACCCCTCAGTAGGGTGTTGCCAATG
TCACATAGCATCATTAGCCCTTATAGGTTGCTAATTTTTATTCGACTAGTACTACTAGGA
TTCTTCTTGGCATGGAGAATACAACATCCAAACCCGGAGGCAATGTGGTTATACGTGATG
TCAATTATATGTGAAGTATGGTTTGCATTTTCATGGTTTCTGGATCAGATGCCCAGGATA
TCACCAGTTAATCGGTCTACTGACCTAGTGGTACTACGCGAGAAATTTGAAATGCCATCA
CCCTCCAATCCTTTAGGTAGGTCAGATCTACCAGGAGTTGATATATTTGTATCAACGGCT
GATCCAGAGAAAGAGCCGCCCCTTGTCACAGCCAACACCGTCCTATCCATCTTAGCAGCT
GACTATCCCGTGGAGAAGTTAGCTTGCTATGTCTCAGACGATGGCGGTACCCTTCTAACA
TTTGAGGCAATGGCAGAAGCTACTAGCTTTGCTGATTTGTGGGTACCATTCTGCAGGAAA
CATGCTATTGAGCCTAGGAATCCTGAAGCCTATTTTCTCCTCAAGGGAGACCCTACAAAG
AACAAGAAGAGAGGTGATTTCGTCAAAGATAGACGAAGGGTAAAAAGAGAATATGATGAA
TTTAAGGTAAGAATAAACAGTCTGCAAGATTCAATAAGAAGGAGATCAGACGCGTTTAAT
GCTCGAGAAGAAATGAAGATGTTAAAGCAGATGAAAGAGAATGAGACTGATCCTGCAGAG
GCAATCAAAGTGCAAAAGGCTATTTGGATGGCTGATGGAACTCACTGGCCGGGCTCATGG
TCTATCCCCAGCAGGGATCATCGCAATGGTGATCATCCCGGGATCCTTCAGGTAATGTTG
AAACCCCCAAGTAGTGATCCTCTAATGGGAGGGGGTGATCAAGATAAGCTATTAGATTTT
TCGGACGTGGACATAAGGCTTCCAATGTTTGTGTATGTGTCGCGTGAGAAGAGACGTGAG
TATGATTACAATAAAAAAGCAGGTGCCATGAATGCCCTAGTAAGAGCTTCTGCCATTTTA
TCTAATGGTGCATTCATACTCAACCTTAATTATGATCACTATATATACAACTGCTTAGCT
ATTCGTGAAGGCATGTGTTTCATGATGGACAGAGGTGGAGAAGACATATGTTTTATTCAA
TTCCCTCAACGATTTGAAGGAATCGATCCCTCTGATCGTTATGCCAATCACAACACTGTG
TTTTTTGATGGAAATATGCGCGCCCTTGATGGTCTGCAGGGTCCTATGTACGTTGGGACG
GGCTGCATGTTTAGGCGATTTGCACTTTATGGATTCGAACCAACAAAACCAGATAAGACA
CCACAGAAAGATGCAGAGGCTGAAGCATTGAAAGCCACAGAAGTTGATTATGACTTCGAT
GTGAATATACTAACTAAGAAATTTGGTAACTCCACAATGTTAGCTGAATCTATTCCAATT
GCTGAGTTCCAAGGTCGTCCTATCGCTGATCACCCTGCTGTCAAGTTTGGACGACCTCCT
GGTGCTCTTAGAACCCCAAAGGAACCACTTGATGCCACTAACGTAGCCGAAGCAGTCTCT
GTTATATCTTGTTGGTATGAAGAAAATACAGAGTGGGGTACTCGAATGGGATGGATTTAT
GGTTCAGTGATGGAAGGTGTGGTTACTGGATACCGGATGCACAATCTTGGATGGCGTTCT
ATATATTGCATCACCAAACGCGATGCATTCCGTGGATCAGCTCCTATAAATCTAACAGAT
AGACTACATCAAGTACTCCGTTGGGCTATAGGTTCAGTTGAAATCTTTTACTCAAGAAAC
AATGCAATTCTTGCATCGCGAAAACTCAAATTCCTCCAACGTCTTGCTTACCTTAACGTT
AGCATTTATCCTTTCACTTCATTTTTCCTCGTCGTCTTCTGTTTTCTCCCTGCACTCTGC
CTCATATCCGGTCAATTCATTGTCCAAAATTTCAACGTCGCGTTCCTAGTATATCTATTA
ACCATATCTATCTGTATCATTGGTTCAGCTATCTTAGAGGTAAAATGGTCAGGGGTTGCT
TTAGAGGATTGGTGGAGAAATGAACAATTTTGGGTTATTTCAGGTACTAGTTCTCATCTT
GCTGCTGTTGTGCTAGGTCTACTTAAAGTATTCATGGGATGTGAAACATCATTTACTCCT
ACATCTAAATCCATTGGAGAAGACGTTGATGAAGCGTATGCTGAATTGTACATGGTGAAA
TGGACACCATTGATGATACCACCTATCGTCATTGGTATGGTTAACATAATTGCAGTTGTT
GTTGCATTTTCTAGAGCGATATTCGCCATTGTACCTCAATGGGGAAAATTCATTGGTGGT
GCATTTTTCGCGTTTTGGGTGTTGGCTCACTTGTATCCTTTTGCTAAAGGACTGATGGGT
AAAAGAAGAAAAACACCCACAATTGTGTTTGTTTGGTCAGGTCTCATTGCAATAACAATC
TCATTGCTATGGATAGCTTTTGGTAACCCACAAGCTGGTCCTGGTGCTGTACAAGGGGTT
GCTGGTGGTGGCTTTCAATTTCCTTAA