Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058336
CDS Infomation

pacid=37438332 polypeptide=PGSC0003DMP400039271 locus=PGSC0003DMG400022657 ID=PGSC0003DMT400058336.v4.03 annot-version=v4.03
Sequence

ATGGAGGAAATACAAGACACTAATCCTACAACTTTGAAAGTTCTAATGGTTCCATGGTTA
GCTCATGGCCATGTAATCCCTTATTTAGAACTAGCCAAGAAACTCTCCAAAACCAATCTT
TTCTTCATTTACTTTTGTTCAACACCTATCATTCTCAATTCCATCAATCAAGAAAATCTA
CCAAAAAACATCCAACTAATAGAATTCCCTTTACCATCATCACCACAACTTCCCAGCCAC
CAACACACCACCAATGGCCTACCGAAAAACCTCCTTTCAACGTTGATCCAAACTTTTGGA
GAAGCTGGTTCTACCTTTGCCAAGATTCTTGATTCTCTCTCTCCTGATTTGCTTATTTTT
GATGGGTTTCAACCATGGGCACCAGAACTTGCTTCTTCAAGAAAAATTCCTGCCATTGAT
TTCCTTATCATTGGTTCTGCTTCCGTATCTTTCTTCTATCACCATTATCTGTATGCTGGC
AAAAGAGACTTTCCATTCTCAGGAATTTTCCTCAAGGATTTTGAGGCAAAGCAACTCCAA
CTCACCGCGGAAATGAACATTTCCATAGGACCTAATGTTGCTTTCAATGGGCTGGAAAAA
TCCCATGAGATCATTTTGATCAACACTTGTAATGAAATAGAGGGTAAGTATGTTGATTAT
CTCTCGACTCTAAGCAATAAAAAAGTCGTACCGGTAGGTCCACTTATTCGTGAAATGGAA
ACAACTACAGAGAATGAAGAGAACTCCAAGATTATCCAATGGCTAGACAAGAAGGATGAG
TCCTCTTGTGTTTATGTTTCGTTTGGAAGTGAATATTTCTTGTCCAAAGAGGAAATCGAA
GAAATAGCTCATAGTTTAGAGCTAAGTGAATTGAATTTCATTTGGGTACTTAGGTTTCCA
TTAGGTGAAGAAACTAACATTGAAAATGCTTTACCAAAAGGCTTTCTTGATAGAGTTGAA
GGAAAAGGTGTCATTGTGGAAAAATGGGCACCTCAAGCAAGAATTCTTGAGCATCCAAGT
GTTGGGGGATTCTTATGCCATTGTGGATGGAATTCTATACTAGAAAGTTTACATTTTGGA
GTTCCTCTTATAACCATGCCTATGCATTTTGATCAACATACTCATTCAAGAATGACGGTC
GAGTTGGGGACAGCTATGGAGGTTGTGAGAGATGATCAAAATGGGAAACTGAATAAAGAA
GAGACAGCAAAAGTGATAAGAAATGTGGTGATGGAGAAGAATGGTGGTGAAAATGTGAAG
GCAAAGGTGAAAGAATTGAGGAAAAAGATAAGAGAGAAAGGAGAGGAAGAGTTTGATCAA
GTTGTTAACAAGTTGTTGGACCTTTCTACCAAGAATAAGCAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400039271
PEP Infomation

pacid=37438332 transcript=PGSC0003DMT400058336 locus=PGSC0003DMG400022657 ID=PGSC0003DMT400058336.v4.03 annot-version=v4.03
Sequence

MEEIQDTNPTTLKVLMVPWLAHGHVIPYLELAKKLSKTNLFFIYFCSTPIILNSINQENL
PKNIQLIEFPLPSSPQLPSHQHTTNGLPKNLLSTLIQTFGEAGSTFAKILDSLSPDLLIF
DGFQPWAPELASSRKIPAIDFLIIGSASVSFFYHHYLYAGKRDFPFSGIFLKDFEAKQLQ
LTAEMNISIGPNVAFNGLEKSHEIILINTCNEIEGKYVDYLSTLSNKKVVPVGPLIREME
TTTENEENSKIIQWLDKKDESSCVYVSFGSEYFLSKEEIEEIAHSLELSELNFIWVLRFP
LGEETNIENALPKGFLDRVEGKGVIVEKWAPQARILEHPSVGGFLCHCGWNSILESLHFG
VPLITMPMHFDQHTHSRMTVELGTAMEVVRDDQNGKLNKEETAKVIRNVVMEKNGGENVK
AKVKELRKKIREKGEEEFDQVVNKLLDLSTKNKQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400058336
Transcript Infomation

pacid=37438332 locus=PGSC0003DMG400022657 ID=PGSC0003DMT400058336.v4.03 annot-version=v4.03
Sequence

ATGGAGGAAATACAAGACACTAATCCTACAACTTTGAAAGTTCTAATGGTTCCATGGTTA
GCTCATGGCCATGTAATCCCTTATTTAGAACTAGCCAAGAAACTCTCCAAAACCAATCTT
TTCTTCATTTACTTTTGTTCAACACCTATCATTCTCAATTCCATCAATCAAGAAAATCTA
CCAAAAAACATCCAACTAATAGAATTCCCTTTACCATCATCACCACAACTTCCCAGCCAC
CAACACACCACCAATGGCCTACCGAAAAACCTCCTTTCAACGTTGATCCAAACTTTTGGA
GAAGCTGGTTCTACCTTTGCCAAGATTCTTGATTCTCTCTCTCCTGATTTGCTTATTTTT
GATGGGTTTCAACCATGGGCACCAGAACTTGCTTCTTCAAGAAAAATTCCTGCCATTGAT
TTCCTTATCATTGGTTCTGCTTCCGTATCTTTCTTCTATCACCATTATCTGTATGCTGGC
AAAAGAGACTTTCCATTCTCAGGAATTTTCCTCAAGGATTTTGAGGCAAAGCAACTCCAA
CTCACCGCGGAAATGAACATTTCCATAGGACCTAATGTTGCTTTCAATGGGCTGGAAAAA
TCCCATGAGATCATTTTGATCAACACTTGTAATGAAATAGAGGGTAAGTATGTTGATTAT
CTCTCGACTCTAAGCAATAAAAAAGTCGTACCGGTAGGTCCACTTATTCGTGAAATGGAA
ACAACTACAGAGAATGAAGAGAACTCCAAGATTATCCAATGGCTAGACAAGAAGGATGAG
TCCTCTTGTGTTTATGTTTCGTTTGGAAGTGAATATTTCTTGTCCAAAGAGGAAATCGAA
GAAATAGCTCATAGTTTAGAGCTAAGTGAATTGAATTTCATTTGGGTACTTAGGTTTCCA
TTAGGTGAAGAAACTAACATTGAAAATGCTTTACCAAAAGGCTTTCTTGATAGAGTTGAA
GGAAAAGGTGTCATTGTGGAAAAATGGGCACCTCAAGCAAGAATTCTTGAGCATCCAAGT
GTTGGGGGATTCTTATGCCATTGTGGATGGAATTCTATACTAGAAAGTTTACATTTTGGA
GTTCCTCTTATAACCATGCCTATGCATTTTGATCAACATACTCATTCAAGAATGACGGTC
GAGTTGGGGACAGCTATGGAGGTTGTGAGAGATGATCAAAATGGGAAACTGAATAAAGAA
GAGACAGCAAAAGTGATAAGAAATGTGGTGATGGAGAAGAATGGTGGTGAAAATGTGAAG
GCAAAGGTGAAAGAATTGAGGAAAAAGATAAGAGAGAAAGGAGAGGAAGAGTTTGATCAA
GTTGTTAACAAGTTGTTGGACCTTTCTACCAAGAATAAGCAGTGA