Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058330
CDS Infomation

pacid=37439281 polypeptide=PGSC0003DMP400039267 locus=PGSC0003DMG400022655 ID=PGSC0003DMT400058330.v4.03 annot-version=v4.03
Sequence

ATGGATGGAAAAAAATGGTTAAAGGTGGTTATTTTTCTATGCTTAATTGCGGTTTCAACT
GGTAGAGAATTCAAAGTGAAGGCCAAGAACAAGCATCATGCAGCTATCTACAACCACACC
CTTGCCACCATATTAGTGGAATATGCTTCAGCAGTCTATGTGTCTGATTTGACAGAATTA
TTTGCCTGGACATGCTCAAGATGTAATGATTTAACCAAGGGATTTCAAATTCTAGAGCTC
ATTGTTGATGTGCAACGATGCCTTCAGGCATTTGTAGGTGTGGCACAGGATCTTAATGCC
ATTGTTATTGCATTCAGAGGCACTCAGGAAAGCAGCCTACAGAATTGGATTGAAGATCTA
AACTGGAAGCAGCTTGATATATCTTATCCAGGAATGGAAGATGCAATGGTGCATCATGGA
TTTTATTCTGCTTATCATAACACGTCATTGCGTCCAGGAGTGCTAACTGCTGTTAAAAGT
GCGAAAGAGTTCTATGGAAATATTCCAATTATAGTGACTGGACACTCAATGGGAGGGGCT
ATGGCTGCTTTCTGTGGCCTGGATCTCACCGTGCATCTTGGATGCCAGAATGTTTCGGTT
ATGACATTTGGACAACCACGAATTGGTAATGCTGCATTTGTGTCCTACTACAGAAAACGG
GTCCCCAATACAATTCGTGTTACAAATCGTCATGATATTGTGCCTCATTTGCCCCCTTAC
TATCAATACTTCCCTCACAAAACTTATCGCCATTTCCCTAGAGAGGTCTGGCTTTATGAT
CTTGGCTTTGGAAGTTTAGTTTATACAGTTGAAAAGGTCTGCGATAATTCTGGGGAGGAT
CCTTCTTGCAGCAGGTCGGTGAAAGGCAACAGTGTTAAGGATCATGTGAGATATTTTGGT
GTAAAATTATCATGTGATGTATCAGCGGGGTGCAGAATTGTGATGGGTAATGGTCTAGCA
TCGTATCGCACAACAGACAATGATGGAAATGTCATCTTCTCCAGAAATATATCTTCTTCT
GTTTTGAGAATGAATGTGGAGTCTAGTGAGGAAGGGAAATCATTATAG

Peptide Sequence

PEP ID

PGSC0003DMP400039267
PEP Infomation

pacid=37439281 transcript=PGSC0003DMT400058330 locus=PGSC0003DMG400022655 ID=PGSC0003DMT400058330.v4.03 annot-version=v4.03
Sequence

MDGKKWLKVVIFLCLIAVSTGREFKVKAKNKHHAAIYNHTLATILVEYASAVYVSDLTEL
FAWTCSRCNDLTKGFQILELIVDVQRCLQAFVGVAQDLNAIVIAFRGTQESSLQNWIEDL
NWKQLDISYPGMEDAMVHHGFYSAYHNTSLRPGVLTAVKSAKEFYGNIPIIVTGHSMGGA
MAAFCGLDLTVHLGCQNVSVMTFGQPRIGNAAFVSYYRKRVPNTIRVTNRHDIVPHLPPY
YQYFPHKTYRHFPREVWLYDLGFGSLVYTVEKVCDNSGEDPSCSRSVKGNSVKDHVRYFG
VKLSCDVSAGCRIVMGNGLASYRTTDNDGNVIFSRNISSSVLRMNVESSEEGKSL*

Transcript Sequence

Transcript ID

PGSC0003DMT400058330
Transcript Infomation

pacid=37439281 locus=PGSC0003DMG400022655 ID=PGSC0003DMT400058330.v4.03 annot-version=v4.03
Sequence

ATGGATGGAAAAAAATGGTTAAAGGTGGTTATTTTTCTATGCTTAATTGCGGTTTCAACT
GGTAGAGAATTCAAAGTGAAGGCCAAGAACAAGCATCATGCAGCTATCTACAACCACACC
CTTGCCACCATATTAGTGGAATATGCTTCAGCAGTCTATGTGTCTGATTTGACAGAATTA
TTTGCCTGGACATGCTCAAGATGTAATGATTTAACCAAGGGATTTCAAATTCTAGAGCTC
ATTGTTGATGTGCAACGATGCCTTCAGGCATTTGTAGGTGTGGCACAGGATCTTAATGCC
ATTGTTATTGCATTCAGAGGCACTCAGGAAAGCAGCCTACAGAATTGGATTGAAGATCTA
AACTGGAAGCAGCTTGATATATCTTATCCAGGAATGGAAGATGCAATGGTGCATCATGGA
TTTTATTCTGCTTATCATAACACGTCATTGCGTCCAGGAGTGCTAACTGCTGTTAAAAGT
GCGAAAGAGTTCTATGGAAATATTCCAATTATAGTGACTGGACACTCAATGGGAGGGGCT
ATGGCTGCTTTCTGTGGCCTGGATCTCACCGTGCATCTTGGATGCCAGAATGTTTCGGTT
ATGACATTTGGACAACCACGAATTGGTAATGCTGCATTTGTGTCCTACTACAGAAAACGG
GTCCCCAATACAATTCGTGTTACAAATCGTCATGATATTGTGCCTCATTTGCCCCCTTAC
TATCAATACTTCCCTCACAAAACTTATCGCCATTTCCCTAGAGAGGTCTGGCTTTATGAT
CTTGGCTTTGGAAGTTTAGTTTATACAGTTGAAAAGGTCTGCGATAATTCTGGGGAGGAT
CCTTCTTGCAGCAGGTCGGTGAAAGGCAACAGTGTTAAGGATCATGTGAGATATTTTGGT
GTAAAATTATCATGTGATGTATCAGCGGGGTGCAGAATTGTGATGGGTAATGGTCTAGCA
TCGTATCGCACAACAGACAATGATGGAAATGTCATCTTCTCCAGAAATATATCTTCTTCT
GTTTTGAGAATGAATGTGGAGTCTAGTGAGGAAGGGAAATCATTATAG