Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058304
CDS Infomation

pacid=37443452 polypeptide=PGSC0003DMP400039247 locus=PGSC0003DMG400022639 ID=PGSC0003DMT400058304.v4.03 annot-version=v4.03
Sequence

ATGGCTATCAATTTTTGCCTCTCTATGATTCTTTATCTCTTCATTTTTTACATTCTTTCA
ATTATTCCAAATGTTTCATCTCAATCACAAAATGTAGAAACTTTCTTTCCTTTTCCTTTG
CCTAATCTTCTCCCTCCTCCTATTCCACCCGTTCAACGATCACCACCGTCATCATCATCT
CCTCCTCCGCTACTTCCACCGGCCCCCACTGATACGCTTGCGCCACCGCCTTCCGTGTCA
ACACCAAATACATCATCAAACAAGGCTGTTGGAACAGCTATTGGTGTGACTGCTGCTAGT
ACTGTTGTATTATCTGCCCTTTTGTTCTTTTTCCTTGTTAGGTACTCTAGGCGTAGGAGA
AAACAACAAGAAGGTAGTGCGATTGGTGATCCACGAGGTGGTGGTACTAGTGGTGCTGGT
GCTAGTGCTACACCTGGGGTTGTTCAAGATCAATTCTTGAAATTTGAAGGGAATTTAAAA
GGGGTGATTGTTGATGAAAATGGATTGGATGTGCTTTATTGGAGGAAATTGGAGAGTGGT
GAACAGAGGAAAGAGAGTTTCAAGAAGAAGAAGGTGTTTGTTAATGCATTAAGAGATGAA
GAAGAAGAGAAGAGGATGATCAGTCGAGGCGTCGGTGGAAGGAAGAAATCAGATCATCCA
ATTCAAGAATTGCCTCTGCTTAGAGGCAAATCTTCAACTTCTCAAAGCCCTTCTTGGCTT
GATTTGGAAAATAAACAACCAACTCCTGATGATGGGATTGTTTTTAAGCCTATGGAGAAA
CAAGAATCATCAAGTCAACTCGTATCACGAGCTCCTCCACCACCACCACCACCAGCACCG
CCATTGTCTCTATCAGCGATTCCAAAGGCGCTTGGTCCACCACCACCACCGCCACCAGGA
CTAAAGAAAGGCCCTCCACTACCTACTCATCCTAGTGGATTGCCTTCATCATCAAGTGCA
GGGGCTTCAGGAAGTGGAAATGATAAAGTGAAACTAAAGCCATTGCATTGGGATAAATTG
AATGCTAATGTTGAGCATTCAATGGTCTGGGACAAACTCGATCGTGGATCGTTCAAGTTT
GATGGAGATCTTATGGAGGCTTTATTTGGATGTGTTGCTACAAATAAAAAGCCCTCAGGA
ACAGAAAGTAGAGCTTTGAGTCGAAGAGCAGATATATCAGGTCCACCTTCTCAGATATTC
ATTCTTGAAACCAGGAAGTCACAAAACATTGCAATTGTACTCAGGTCACTTGGTGTTACT
CGTAAAGAGATTATCGATGCACTTGTCGATGGACAAGGTTTAAGTGTTGATACTCTTGAG
AAACTCTGCAGAATAGCCCCAACAAAAGATGAGGAAGCAGAAGTTCTTGCATTTGAAGGA
GATCCCACCAGATTAGCTGATGCTGAATCTTTCCTCTTTCATATACTCAAAGCTGTTCCA
TCCGCCTTTACTCGTTTCAACGCCATGCTTTTTAGACCAAATTATGGGACAGAAATTCAG
CATCATAAAGAGTACTTACAAACACTTGAATTGTCTTGCAAGGAGCTTAAAGCTCAAAGA
TTGTTCTTGAAACTTCTTGAAGCCATTCTGAAAGCAGGGAATAGAATGAATGCCGGAACT
TCAAGAGGAAATGCACAAGCATTTAAACTTACTGCTCTCAGAAAACTCTCTGATGTGAAA
AGTATGGATGGTAAGACCACGTTACTTCACTTTGTTGTGCAAGAAGTAGTCAGAGCAGAA
GGAAAACGTTGCGTTCTCAATCGTAATCAAAGTATGAAGCGTAGCAATAGCCAGACTACT
GCGAACAGCGCCATTCCAACATCAAAGAACACTACAGAAAATGATGAGACAGAGAAGGAG
TATATGATGCTTGGCTTACCAATTGTGGGTGGCTTAAGTTCTGCATTTAGTAATGTAAAG
AAAGCAGCTGCAATAGACTACGACTTGCTGTCCAAAACATGCTCGATGCTAACAGCTCAG
ATATCTGAAATCAGGACGCATTTGGCACAACGCGACAATGTTAAAGGACTATTCGGAAAA
GAGATGAAAAAATTCCTGGATGCTGCTGAAAAAGAAATGAAAACAGTAAGAGAAGAACAA
GATAGAGTAATGGAACTCGTAAAGAAAACAACAGATTATTATCAAGCAGGAGCTTCAGAT
GATAAAGGATGGCAACCACTTCAACTATTCGCCATCGTTAAAGATTTCCTAGAAATGGTT
GATAAAGTTTGTGTAGAGATTACAAGAAACATGCAGAAGAAGAAACCCCTTGTAGCTGTT
GGAGGATCATCATCACCAGGAATGGAAAATAGTAGAGCAGTCAGATTCCCAAAATTGCCT
GCTAACTTCTTATCAGACATTTCCAAGAGCAGTTCGTCTTCTGATTCTAGCGATGATTCA
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400039247
PEP Infomation

pacid=37443452 transcript=PGSC0003DMT400058304 locus=PGSC0003DMG400022639 ID=PGSC0003DMT400058304.v4.03 annot-version=v4.03
Sequence

MAINFCLSMILYLFIFYILSIIPNVSSQSQNVETFFPFPLPNLLPPPIPPVQRSPPSSSS
PPPLLPPAPTDTLAPPPSVSTPNTSSNKAVGTAIGVTAASTVVLSALLFFFLVRYSRRRR
KQQEGSAIGDPRGGGTSGAGASATPGVVQDQFLKFEGNLKGVIVDENGLDVLYWRKLESG
EQRKESFKKKKVFVNALRDEEEEKRMISRGVGGRKKSDHPIQELPLLRGKSSTSQSPSWL
DLENKQPTPDDGIVFKPMEKQESSSQLVSRAPPPPPPPAPPLSLSAIPKALGPPPPPPPG
LKKGPPLPTHPSGLPSSSSAGASGSGNDKVKLKPLHWDKLNANVEHSMVWDKLDRGSFKF
DGDLMEALFGCVATNKKPSGTESRALSRRADISGPPSQIFILETRKSQNIAIVLRSLGVT
RKEIIDALVDGQGLSVDTLEKLCRIAPTKDEEAEVLAFEGDPTRLADAESFLFHILKAVP
SAFTRFNAMLFRPNYGTEIQHHKEYLQTLELSCKELKAQRLFLKLLEAILKAGNRMNAGT
SRGNAQAFKLTALRKLSDVKSMDGKTTLLHFVVQEVVRAEGKRCVLNRNQSMKRSNSQTT
ANSAIPTSKNTTENDETEKEYMMLGLPIVGGLSSAFSNVKKAAAIDYDLLSKTCSMLTAQ
ISEIRTHLAQRDNVKGLFGKEMKKFLDAAEKEMKTVREEQDRVMELVKKTTDYYQAGASD
DKGWQPLQLFAIVKDFLEMVDKVCVEITRNMQKKKPLVAVGGSSSPGMENSRAVRFPKLP
ANFLSDISKSSSSSDSSDDS*

Transcript Sequence

Transcript ID

PGSC0003DMT400058304
Transcript Infomation

pacid=37443452 locus=PGSC0003DMG400022639 ID=PGSC0003DMT400058304.v4.03 annot-version=v4.03
Sequence

ATGGCTATCAATTTTTGCCTCTCTATGATTCTTTATCTCTTCATTTTTTACATTCTTTCA
ATTATTCCAAATGTTTCATCTCAATCACAAAATGTAGAAACTTTCTTTCCTTTTCCTTTG
CCTAATCTTCTCCCTCCTCCTATTCCACCCGTTCAACGATCACCACCGTCATCATCATCT
CCTCCTCCGCTACTTCCACCGGCCCCCACTGATACGCTTGCGCCACCGCCTTCCGTGTCA
ACACCAAATACATCATCAAACAAGGCTGTTGGAACAGCTATTGGTGTGACTGCTGCTAGT
ACTGTTGTATTATCTGCCCTTTTGTTCTTTTTCCTTGTTAGGTACTCTAGGCGTAGGAGA
AAACAACAAGAAGGTAGTGCGATTGGTGATCCACGAGGTGGTGGTACTAGTGGTGCTGGT
GCTAGTGCTACACCTGGGGTTGTTCAAGATCAATTCTTGAAATTTGAAGGGAATTTAAAA
GGGGTGATTGTTGATGAAAATGGATTGGATGTGCTTTATTGGAGGAAATTGGAGAGTGGT
GAACAGAGGAAAGAGAGTTTCAAGAAGAAGAAGGTGTTTGTTAATGCATTAAGAGATGAA
GAAGAAGAGAAGAGGATGATCAGTCGAGGCGTCGGTGGAAGGAAGAAATCAGATCATCCA
ATTCAAGAATTGCCTCTGCTTAGAGGCAAATCTTCAACTTCTCAAAGCCCTTCTTGGCTT
GATTTGGAAAATAAACAACCAACTCCTGATGATGGGATTGTTTTTAAGCCTATGGAGAAA
CAAGAATCATCAAGTCAACTCGTATCACGAGCTCCTCCACCACCACCACCACCAGCACCG
CCATTGTCTCTATCAGCGATTCCAAAGGCGCTTGGTCCACCACCACCACCGCCACCAGGA
CTAAAGAAAGGCCCTCCACTACCTACTCATCCTAGTGGATTGCCTTCATCATCAAGTGCA
GGGGCTTCAGGAAGTGGAAATGATAAAGTGAAACTAAAGCCATTGCATTGGGATAAATTG
AATGCTAATGTTGAGCATTCAATGGTCTGGGACAAACTCGATCGTGGATCGTTCAAGTTT
GATGGAGATCTTATGGAGGCTTTATTTGGATGTGTTGCTACAAATAAAAAGCCCTCAGGA
ACAGAAAGTAGAGCTTTGAGTCGAAGAGCAGATATATCAGGTCCACCTTCTCAGATATTC
ATTCTTGAAACCAGGAAGTCACAAAACATTGCAATTGTACTCAGGTCACTTGGTGTTACT
CGTAAAGAGATTATCGATGCACTTGTCGATGGACAAGGTTTAAGTGTTGATACTCTTGAG
AAACTCTGCAGAATAGCCCCAACAAAAGATGAGGAAGCAGAAGTTCTTGCATTTGAAGGA
GATCCCACCAGATTAGCTGATGCTGAATCTTTCCTCTTTCATATACTCAAAGCTGTTCCA
TCCGCCTTTACTCGTTTCAACGCCATGCTTTTTAGACCAAATTATGGGACAGAAATTCAG
CATCATAAAGAGTACTTACAAACACTTGAATTGTCTTGCAAGGAGCTTAAAGCTCAAAGA
TTGTTCTTGAAACTTCTTGAAGCCATTCTGAAAGCAGGGAATAGAATGAATGCCGGAACT
TCAAGAGGAAATGCACAAGCATTTAAACTTACTGCTCTCAGAAAACTCTCTGATGTGAAA
AGTATGGATGGTAAGACCACGTTACTTCACTTTGTTGTGCAAGAAGTAGTCAGAGCAGAA
GGAAAACGTTGCGTTCTCAATCGTAATCAAAGTATGAAGCGTAGCAATAGCCAGACTACT
GCGAACAGCGCCATTCCAACATCAAAGAACACTACAGAAAATGATGAGACAGAGAAGGAG
TATATGATGCTTGGCTTACCAATTGTGGGTGGCTTAAGTTCTGCATTTAGTAATGTAAAG
AAAGCAGCTGCAATAGACTACGACTTGCTGTCCAAAACATGCTCGATGCTAACAGCTCAG
ATATCTGAAATCAGGACGCATTTGGCACAACGCGACAATGTTAAAGGACTATTCGGAAAA
GAGATGAAAAAATTCCTGGATGCTGCTGAAAAAGAAATGAAAACAGTAAGAGAAGAACAA
GATAGAGTAATGGAACTCGTAAAGAAAACAACAGATTATTATCAAGCAGGAGCTTCAGAT
GATAAAGGATGGCAACCACTTCAACTATTCGCCATCGTTAAAGATTTCCTAGAAATGGTT
GATAAAGTTTGTGTAGAGATTACAAGAAACATGCAGAAGAAGAAACCCCTTGTAGCTGTT
GGAGGATCATCATCACCAGGAATGGAAAATAGTAGAGCAGTCAGATTCCCAAAATTGCCT
GCTAACTTCTTATCAGACATTTCCAAGAGCAGTTCGTCTTCTGATTCTAGCGATGATTCA
TGA