Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058296
CDS Infomation

pacid=37441923 polypeptide=PGSC0003DMP400039239 locus=PGSC0003DMG400022635 ID=PGSC0003DMT400058296.v4.03 annot-version=v4.03
Sequence

ATGCTTCCAGCAGTTTGGTTCATCTTTAGCAGGAAAGGATGTGATGCAGCTGTCCAATAT
CTTGAAGACTGCAGGTTACTGGATGAGTGTGAAACGAGTGAAGTTGAACTGGCACTCAAG
AGGTTCCGTATTCAATACCCTGATGCTGTGCGTGTGTCTGCAGTGAAAGGCCTCCGCCGA
GGAGTGGCTGCACATCATGCTGGCTGTCTCCCCCTTTGGAAATCATTCATTGAAGAGTTA
TTTCAGCGAGGTCTAGTTAAGGTTGTCTTTGCTACCGAAACACTTGCTGCTGGCATCAAT
ATGCCTGCTAGAACAGCTGTCATTTCATCTCTCACCAAAAGGGGCGATAGTGGACGAATC
CAGTTAAGCTCAAATGAATTATTCCAAATGGCTGGGCGTGCTGGTCGTAGAGGTATTGAT
GAAAAGGGTCACGTGGTTCTTGTTCAGACTCCTTATGAAGGGCCTGAGGAGTGCTGCAAA
GTTCTTTTTTCTGGGCTTCAACCTCTTGTCTCACAATTTACCGCCTCGTATGGAATGGTG
CTTAATCTCGTAGCAGGGGCCAAAGTTACCCGTAGATCAACTGGGTTAGATGAGATAAAA
GTCACACGAGCAGGACGGACTTTGGAAGAAGCAAGGAAGTTAATTGAACAGAGTTTTGGT
AATTATGTTGGAAGCAATGTCATGCTTGCTGCAAAAGAGGAGCTTGCTAGAATAGAAAAG
GAAATAGAGACACTTACTTCAGAAATCAGTGAGGAAGCGATTGCTAGAAAGAGCCAGAAG
CTCTTAACGCAGTCAGCATATCAGGAGATTGCTGAACTCGAGGAAGAATTAAGAGCTGAA
AAGCATCTTCGAACTGAACTCCGAAGAAAAATGGAGCTGGAAAGAGTGTCCTCATTGAAA
CCTTTGTTAAAGGAGATAGGAGATGGACACCTTCCATTCATGTCTTTGCACTACACCGAC
AGTGACGGGGTACAACATTTAGTTGCTGCTGTTTATCTGGGGAAGGTTGATACTTTGAAT
ACTGAAAAGCTTAAAAGTATGGTGTGGGACAATGAGGCCTTTGCATTAAAGACAGCAGTG
GAAAATTTTGAACTTGGTGATAATGGAGGTGAAGATGTTAAACCGTCTTATCATGTGGCT
CTTGGTTCAGATAACTCTTGGTATCTTTTCACAGAGAAGTGGATTAGAACGGTTTACAGA
ACAGGCTTTCCAAATGCTGCCTTAACTCTTGCTGACGCCTTGCCTCGTGAAATTATGGCC
GAGCTTCTTGATAAGGCAGATATGCAGTGGCAAAAGTTAGCTGTGTCTGAACTTGGAGGT
CTATGGTGTATGGAAGGTTCTTTGGAGACATGGTCTTGGAGTTTAAATGTTCCAGTCTTG
AGTAGTCTATCTGAAGATGATGAGGTCTTGCAATTATCTCAAGCATACAATGATGCAGTA
GAATGCTACAAGAGCCAAAGGAATAAGGTCTCTCGTTGGAAAAAAAGGATAGCTCGTACA
GAGGGCTTTAAACAGTATCAGAAGATAATTGACTCAGCTAAGTTCACTGAGGAAAAGATT
CGCCGGTTGAAGGTTAGGTCGAAGCGTTTGATTGGTCGTATAGAGCAGATTGAGCCAACT
GGTTGGAAGGAATTTCTGCAGGTCAGCAATGTTATACATGAAAGTAGAGCATTGGATATC
AATACACACGTCATATTCCCCCTAGGTGAAACTGCAGCTGCAATTCGAGGAGAAAATGAA
CTTTGGCTTGCGATGGTTCTTCGAAATAAATTGTTGCTGAACTTAAAACCTGCACAGCTT
GCTGCAGTTCTTGGTAGTCTAGTTTCTGAAGGCATTAGGCTTCGGCCCTGGAAAAATAAC
AGTTTCGTTTATGAGCCCTCTACCACTGTCTTGAATATCATAGACTTACTGGAAGAACAA
AAAAGCTCACTTCTAGAGCTTCAGGAAAAGCATGGAGTAAATATTCCTTGCTGCTTGGAT
AGCCAATTCACTGGCATGGTTGAAGCCTGGGCATCTGGTCTTACATGGAAAGAGATTATG
ATGGACTGTGCAATGGATGAAGGAGATTTGGCTCGCCTTCTACGGAGAACGATTGATTTG
TTAGCTCAGGTTCCCAAATTGCCTGATATAGATCCACTGCTGCAAATCAATGCCAAGAGT
GCCTCTAACGTAATGGACCGGCCACCAATAAGTGAATTAGCAGGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400039239
PEP Infomation

pacid=37441923 transcript=PGSC0003DMT400058296 locus=PGSC0003DMG400022635 ID=PGSC0003DMT400058296.v4.03 annot-version=v4.03
Sequence

MLPAVWFIFSRKGCDAAVQYLEDCRLLDECETSEVELALKRFRIQYPDAVRVSAVKGLRR
GVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTAVISSLTKRGDSGRI
QLSSNELFQMAGRAGRRGIDEKGHVVLVQTPYEGPEECCKVLFSGLQPLVSQFTASYGMV
LNLVAGAKVTRRSTGLDEIKVTRAGRTLEEARKLIEQSFGNYVGSNVMLAAKEELARIEK
EIETLTSEISEEAIARKSQKLLTQSAYQEIAELEEELRAEKHLRTELRRKMELERVSSLK
PLLKEIGDGHLPFMSLHYTDSDGVQHLVAAVYLGKVDTLNTEKLKSMVWDNEAFALKTAV
ENFELGDNGGEDVKPSYHVALGSDNSWYLFTEKWIRTVYRTGFPNAALTLADALPREIMA
ELLDKADMQWQKLAVSELGGLWCMEGSLETWSWSLNVPVLSSLSEDDEVLQLSQAYNDAV
ECYKSQRNKVSRWKKRIARTEGFKQYQKIIDSAKFTEEKIRRLKVRSKRLIGRIEQIEPT
GWKEFLQVSNVIHESRALDINTHVIFPLGETAAAIRGENELWLAMVLRNKLLLNLKPAQL
AAVLGSLVSEGIRLRPWKNNSFVYEPSTTVLNIIDLLEEQKSSLLELQEKHGVNIPCCLD
SQFTGMVEAWASGLTWKEIMMDCAMDEGDLARLLRRTIDLLAQVPKLPDIDPLLQINAKS
ASNVMDRPPISELAG*

Transcript Sequence

Transcript ID

PGSC0003DMT400058296
Transcript Infomation

pacid=37441923 locus=PGSC0003DMG400022635 ID=PGSC0003DMT400058296.v4.03 annot-version=v4.03
Sequence

ATGCTTCCAGCAGTTTGGTTCATCTTTAGCAGGAAAGGATGTGATGCAGCTGTCCAATAT
CTTGAAGACTGCAGGTTACTGGATGAGTGTGAAACGAGTGAAGTTGAACTGGCACTCAAG
AGGTTCCGTATTCAATACCCTGATGCTGTGCGTGTGTCTGCAGTGAAAGGCCTCCGCCGA
GGAGTGGCTGCACATCATGCTGGCTGTCTCCCCCTTTGGAAATCATTCATTGAAGAGTTA
TTTCAGCGAGGTCTAGTTAAGGTTGTCTTTGCTACCGAAACACTTGCTGCTGGCATCAAT
ATGCCTGCTAGAACAGCTGTCATTTCATCTCTCACCAAAAGGGGCGATAGTGGACGAATC
CAGTTAAGCTCAAATGAATTATTCCAAATGGCTGGGCGTGCTGGTCGTAGAGGTATTGAT
GAAAAGGGTCACGTGGTTCTTGTTCAGACTCCTTATGAAGGGCCTGAGGAGTGCTGCAAA
GTTCTTTTTTCTGGGCTTCAACCTCTTGTCTCACAATTTACCGCCTCGTATGGAATGGTG
CTTAATCTCGTAGCAGGGGCCAAAGTTACCCGTAGATCAACTGGGTTAGATGAGATAAAA
GTCACACGAGCAGGACGGACTTTGGAAGAAGCAAGGAAGTTAATTGAACAGAGTTTTGGT
AATTATGTTGGAAGCAATGTCATGCTTGCTGCAAAAGAGGAGCTTGCTAGAATAGAAAAG
GAAATAGAGACACTTACTTCAGAAATCAGTGAGGAAGCGATTGCTAGAAAGAGCCAGAAG
CTCTTAACGCAGTCAGCATATCAGGAGATTGCTGAACTCGAGGAAGAATTAAGAGCTGAA
AAGCATCTTCGAACTGAACTCCGAAGAAAAATGGAGCTGGAAAGAGTGTCCTCATTGAAA
CCTTTGTTAAAGGAGATAGGAGATGGACACCTTCCATTCATGTCTTTGCACTACACCGAC
AGTGACGGGGTACAACATTTAGTTGCTGCTGTTTATCTGGGGAAGGTTGATACTTTGAAT
ACTGAAAAGCTTAAAAGTATGGTGTGGGACAATGAGGCCTTTGCATTAAAGACAGCAGTG
GAAAATTTTGAACTTGGTGATAATGGAGGTGAAGATGTTAAACCGTCTTATCATGTGGCT
CTTGGTTCAGATAACTCTTGGTATCTTTTCACAGAGAAGTGGATTAGAACGGTTTACAGA
ACAGGCTTTCCAAATGCTGCCTTAACTCTTGCTGACGCCTTGCCTCGTGAAATTATGGCC
GAGCTTCTTGATAAGGCAGATATGCAGTGGCAAAAGTTAGCTGTGTCTGAACTTGGAGGT
CTATGGTGTATGGAAGGTTCTTTGGAGACATGGTCTTGGAGTTTAAATGTTCCAGTCTTG
AGTAGTCTATCTGAAGATGATGAGGTCTTGCAATTATCTCAAGCATACAATGATGCAGTA
GAATGCTACAAGAGCCAAAGGAATAAGGTCTCTCGTTGGAAAAAAAGGATAGCTCGTACA
GAGGGCTTTAAACAGTATCAGAAGATAATTGACTCAGCTAAGTTCACTGAGGAAAAGATT
CGCCGGTTGAAGGTTAGGTCGAAGCGTTTGATTGGTCGTATAGAGCAGATTGAGCCAACT
GGTTGGAAGGAATTTCTGCAGGTCAGCAATGTTATACATGAAAGTAGAGCATTGGATATC
AATACACACGTCATATTCCCCCTAGGTGAAACTGCAGCTGCAATTCGAGGAGAAAATGAA
CTTTGGCTTGCGATGGTTCTTCGAAATAAATTGTTGCTGAACTTAAAACCTGCACAGCTT
GCTGCAGTTCTTGGTAGTCTAGTTTCTGAAGGCATTAGGCTTCGGCCCTGGAAAAATAAC
AGTTTCGTTTATGAGCCCTCTACCACTGTCTTGAATATCATAGACTTACTGGAAGAACAA
AAAAGCTCACTTCTAGAGCTTCAGGAAAAGCATGGAGTAAATATTCCTTGCTGCTTGGAT
AGCCAATTCACTGGCATGGTTGAAGCCTGGGCATCTGGTCTTACATGGAAAGAGATTATG
ATGGACTGTGCAATGGATGAAGGAGATTTGGCTCGCCTTCTACGGAGAACGATTGATTTG
TTAGCTCAGGTTCCCAAATTGCCTGATATAGATCCACTGCTGCAAATCAATGCCAAGAGT
GCCTCTAACGTAATGGACCGGCCACCAATAAGTGAATTAGCAGGATGA