Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058294
CDS Infomation

pacid=37444689 polypeptide=PGSC0003DMP400039237 locus=PGSC0003DMG400022634 ID=PGSC0003DMT400058294.v4.03 annot-version=v4.03
Sequence

ATGGCGCTACAGAGACAACCTAGTGATCTGAAAAACAGAGTGAATACTTGTCTCAATAGA
TTATCTGACCGTGATACTCTCACCGTTGCTACGAATGAGCTGGAGTCTATAGCTAGGAGT
CTTAACAGTGAAGGTTTTGGTGCATTTTTGACTTGTATTTCGAGTACGGACTCTTCCGAT
AAATCGCCGGTGCGTCGGCAATGTGTTCGGCTTATCGGAGTTCTCTCAGCTTCTCACGGA
GATGCTTTATCACCGCATCTAACGAAAATGCTTTCTACTGTACTCCGGCGACTTCGTGAC
CCTGACTCAGCTGTTCGCTCTGCTTGTGTAGAAGCTGTTTCCTCCATTGCGTCGGAAATT
ACTCAACCGCCGTTTTCGTCTATTTTGAAGCCGTTAATCGACGCTATTATGCACGAGCAG
GATAATAATTCGCAGATCGGAGCTTCGCTTTGCCTTGCTGCGGCAATTGAAGCATCACCT
GATCCTGAGCCGGCGGAGCTGAAGAAAATGTTGTCGAAGCTCATGAAATTGGTGAAGAAT
GATTCCTTTAAAGCCAAACCGGCGTTGCTGTCGCTCATTAGTAGTATTGTTAGTGTTGGT
GGTGCTTCCAATAAGAATGTATTGAATAGCTTGGTTCCAATTACAGCTGAGTTGTTGAGT
AGTGAAGATTGGACTGTGCGGAAGGCTGCGGCGGAGACATTGGGACGGTTGGCTGTTTCC
GAGAAAGAGTTGTTGTCAGAGTTGAAGGCGTTCTGCATCACGTCATTGGATAGCAGAAGA
TTCGATAAGGTGAAGGTTGTGAGAGAGACAATGAATCGGGCGTTAGAATGGTGGAAGGAA
GTTCCAGGTGCTTCAGATGATGTTTTGCCTCAATTACAATCCAAGTTTCCACAGAAAGAT
TGTGTTAGCGGTGCCTGTTCTCCAACTCCTTCCAAAAGTTCGAGTGATACAGCTACGGAA
ACCCCTCAGCCGAAGAAAGCAATCCGCTCAACCAAGTCACTTGCATCCAGTAGTTCTTCC
TCGATCACCTCCCAGAAAAATAGTTCTATTAGGTTCCGCCGCACAAAATCAAATGTTACG
AGCTCCTGTAAGCTGGATTTTAGAAAATCCCCTGATGCAAAAGCAAAGCACACTGTTTCA
CAGGCTTCTTTGTTGGAGGTAGCTTGTGAAGAACAGAAGAGTCAAAATCTTAGAGTTCAA
GGTTCAGTGGATTCAGTTAGTTGTAGCAGTTCAAACTCAGAAGTAAAGTCAACTCTATTC
AACAGACCACCGGATCAGAAGTTCCACAGATATGGTAATTCACAGTTTGGGTCTCGGGTT
ATTCCACTCTTTGAGGACATGGATGTACCTGATGACAACATCAACGAAGATGCACTCTTG
AGTCATAGAGAGTACGAGAATTTCTGTTCTGTCAGCAAACAGCTTGTTCAGATTGAAAAT
CAACAGTCCAGTTTGTTAGACCTCCTGCAGGGATTTATTGGCAGCTCACGACATGGAATG
AATTCCTTAGAGAAACGTGTAAATGGTTTGGAGAGATTACTTGATGAAATGCAATATGAT
TTGGCAATAACAACAGGGAGGATTTCAGATACTGATTTTACAGGAAGTACATGCGGCATG
ATCCCTCGTGCAGAATTTTTGGGTCCTAAGTTTTGGAGAAGTCCAGAAGGGCAAAATTCA
CAATCAAGAATATCCTTCTCCACTGGGAGCCAGGATGTAGTGTATAGTCAGCCAGAAACG
GATGCTGCCAAGCAGAACAAGAATATATCTTCAGCAAAGCAGTTTAGTATCAATCAGAAT
GAAGCATTACGTTCTTTCTCCGGTAGAAGAAAAGAGAGAACAGCTCGAGATGGCGAAACT
GCAGGTTTTTGTCATGTCAGTAGGCTTAACGGAACTTCATTCACAAATTGCATACAGCAG
CAAACTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400039237
PEP Infomation

pacid=37444689 transcript=PGSC0003DMT400058294 locus=PGSC0003DMG400022634 ID=PGSC0003DMT400058294.v4.03 annot-version=v4.03
Sequence

MALQRQPSDLKNRVNTCLNRLSDRDTLTVATNELESIARSLNSEGFGAFLTCISSTDSSD
KSPVRRQCVRLIGVLSASHGDALSPHLTKMLSTVLRRLRDPDSAVRSACVEAVSSIASEI
TQPPFSSILKPLIDAIMHEQDNNSQIGASLCLAAAIEASPDPEPAELKKMLSKLMKLVKN
DSFKAKPALLSLISSIVSVGGASNKNVLNSLVPITAELLSSEDWTVRKAAAETLGRLAVS
EKELLSELKAFCITSLDSRRFDKVKVVRETMNRALEWWKEVPGASDDVLPQLQSKFPQKD
CVSGACSPTPSKSSSDTATETPQPKKAIRSTKSLASSSSSSITSQKNSSIRFRRTKSNVT
SSCKLDFRKSPDAKAKHTVSQASLLEVACEEQKSQNLRVQGSVDSVSCSSSNSEVKSTLF
NRPPDQKFHRYGNSQFGSRVIPLFEDMDVPDDNINEDALLSHREYENFCSVSKQLVQIEN
QQSSLLDLLQGFIGSSRHGMNSLEKRVNGLERLLDEMQYDLAITTGRISDTDFTGSTCGM
IPRAEFLGPKFWRSPEGQNSQSRISFSTGSQDVVYSQPETDAAKQNKNISSAKQFSINQN
EALRSFSGRRKERTARDGETAGFCHVSRLNGTSFTNCIQQQT*

Transcript Sequence

Transcript ID

PGSC0003DMT400058294
Transcript Infomation

pacid=37444689 locus=PGSC0003DMG400022634 ID=PGSC0003DMT400058294.v4.03 annot-version=v4.03
Sequence

ATGGCGCTACAGAGACAACCTAGTGATCTGAAAAACAGAGTGAATACTTGTCTCAATAGA
TTATCTGACCGTGATACTCTCACCGTTGCTACGAATGAGCTGGAGTCTATAGCTAGGAGT
CTTAACAGTGAAGGTTTTGGTGCATTTTTGACTTGTATTTCGAGTACGGACTCTTCCGAT
AAATCGCCGGTGCGTCGGCAATGTGTTCGGCTTATCGGAGTTCTCTCAGCTTCTCACGGA
GATGCTTTATCACCGCATCTAACGAAAATGCTTTCTACTGTACTCCGGCGACTTCGTGAC
CCTGACTCAGCTGTTCGCTCTGCTTGTGTAGAAGCTGTTTCCTCCATTGCGTCGGAAATT
ACTCAACCGCCGTTTTCGTCTATTTTGAAGCCGTTAATCGACGCTATTATGCACGAGCAG
GATAATAATTCGCAGATCGGAGCTTCGCTTTGCCTTGCTGCGGCAATTGAAGCATCACCT
GATCCTGAGCCGGCGGAGCTGAAGAAAATGTTGTCGAAGCTCATGAAATTGGTGAAGAAT
GATTCCTTTAAAGCCAAACCGGCGTTGCTGTCGCTCATTAGTAGTATTGTTAGTGTTGGT
GGTGCTTCCAATAAGAATGTATTGAATAGCTTGGTTCCAATTACAGCTGAGTTGTTGAGT
AGTGAAGATTGGACTGTGCGGAAGGCTGCGGCGGAGACATTGGGACGGTTGGCTGTTTCC
GAGAAAGAGTTGTTGTCAGAGTTGAAGGCGTTCTGCATCACGTCATTGGATAGCAGAAGA
TTCGATAAGGTGAAGGTTGTGAGAGAGACAATGAATCGGGCGTTAGAATGGTGGAAGGAA
GTTCCAGGTGCTTCAGATGATGTTTTGCCTCAATTACAATCCAAGTTTCCACAGAAAGAT
TGTGTTAGCGGTGCCTGTTCTCCAACTCCTTCCAAAAGTTCGAGTGATACAGCTACGGAA
ACCCCTCAGCCGAAGAAAGCAATCCGCTCAACCAAGTCACTTGCATCCAGTAGTTCTTCC
TCGATCACCTCCCAGAAAAATAGTTCTATTAGGTTCCGCCGCACAAAATCAAATGTTACG
AGCTCCTGTAAGCTGGATTTTAGAAAATCCCCTGATGCAAAAGCAAAGCACACTGTTTCA
CAGGCTTCTTTGTTGGAGGTAGCTTGTGAAGAACAGAAGAGTCAAAATCTTAGAGTTCAA
GGTTCAGTGGATTCAGTTAGTTGTAGCAGTTCAAACTCAGAAGTAAAGTCAACTCTATTC
AACAGACCACCGGATCAGAAGTTCCACAGATATGGTAATTCACAGTTTGGGTCTCGGGTT
ATTCCACTCTTTGAGGACATGGATGTACCTGATGACAACATCAACGAAGATGCACTCTTG
AGTCATAGAGAGTACGAGAATTTCTGTTCTGTCAGCAAACAGCTTGTTCAGATTGAAAAT
CAACAGTCCAGTTTGTTAGACCTCCTGCAGGGATTTATTGGCAGCTCACGACATGGAATG
AATTCCTTAGAGAAACGTGTAAATGGTTTGGAGAGATTACTTGATGAAATGCAATATGAT
TTGGCAATAACAACAGGGAGGATTTCAGATACTGATTTTACAGGAAGTACATGCGGCATG
ATCCCTCGTGCAGAATTTTTGGGTCCTAAGTTTTGGAGAAGTCCAGAAGGGCAAAATTCA
CAATCAAGAATATCCTTCTCCACTGGGAGCCAGGATGTAGTGTATAGTCAGCCAGAAACG
GATGCTGCCAAGCAGAACAAGAATATATCTTCAGCAAAGCAGTTTAGTATCAATCAGAAT
GAAGCATTACGTTCTTTCTCCGGTAGAAGAAAAGAGAGAACAGCTCGAGATGGCGAAACT
GCAGGTTTTTGTCATGTCAGTAGGCTTAACGGAACTTCATTCACAAATTGCATACAGCAG
CAAACTTGA