Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058282
CDS Infomation

pacid=37444752 polypeptide=PGSC0003DMP400039225 locus=PGSC0003DMG400022628 ID=PGSC0003DMT400058282.v4.03 annot-version=v4.03
Sequence

ATGGGGGGTTGTGTTTCAAGACCAGATGGTTGTGCTGGAGGTAGATTAGGTGGTTCAAGG
AGAAAGAGTAGGAAGAGAAGAAAAGCTGTAAAGAAAAGGGTGTCTTCTCATGTATCAGAT
CGATCAGCAGCTGATAAAGTTGACAAGTCTTTCCCTTTGGATCGTTCTTTCAATAATCCC
GCTTTTAATGGAAGTACTGAAGAAGCTTGGTTTGATTCTTCTGCAAGATTTGAATCTGAT
GGCAGTGATGAAGATTTCCAGAGTGTTGCTGATGATGTGCTTTCTCTCAACGGCTCTGAT
TGTGGGCGGACTAGTGTTGCTTCAGCAACAGATGTCCACCATGGGGATGTTGATGTCAAT
GCCCACCACAGGTTATCCTCCGACCTGCAGAGGCAAGGAGAATTATCAACAAGCAATCCT
GCTTGTAGCTCTGATAGTGGTTCAGCTAAAACGTCAATCAACCCAAGCAGTATGTTGCGT
CCAAAAGATGCAGACTCAAAAATGAGACTTGATGGACCTCACAGTGAGGTACAACCTGTG
TTCCTTGATGAAATCTCTTCCTCTGCTAATGGAAGCAGTAGAAGGGAGGATGGCTTGTTG
GATAACTGTGGAATTCTTTCAAACAACTGTTTGCCCTGTCTTGCATCCACGGTTGCACCA
GTTGAGAAGAGACAATCTCTTAGCGCTAGTTCTCCAAGTGCAAAGAAGAAAGCTGCCATA
AAACTTCCTTTCAAATGGAAAGAAGAAAATCCTGTTGCTGCTTTACTTTCATCTAAAGCC
CTGCTTCAAAGACCAATAGCTGGTTCCCAAGTACCAGTTTGCCGGTTGGAGAAGAAAATG
GCTGATAGTTGGTCCCATATTGAACCGGGCACTTTCAGGGTTCGAGGAGAAAACTACTTC
AGGGATAAAAAGAAGGTGTTTGCTTCAAATTATGCAGCATATTATCCTTTTGGAGTTGAT
GTATTTTTAAGCCAGAGAAAAATATTTCATATTGCCCGACTTGTGGAACTTCCTTTCATT
GAACAATCTGGAACACTTCCTCCCATCCTTGTTGTGAATGTTCAGATCCCGTTATATCCT
ACCTCAATTTTTCAAGGTGAAACTGATGGTGAAGGGATGAGTTTTGTTTTGTATTTTAAG
CTTTCAGAAAGTTACGCCAAGGAACTTCCTCCTCATTTTCAAGAGAGTATCAAGAGGCTG
ATTGATGATGAAGTGGAAAAAGTAAAGGCTTTTCCTGTTGAACATACTGCACCCTTTAGG
GAACGATTGAAGATATTAGGTCGTGTAGCAAATATGGAGGAACTCCCATTAAGTGCAGCA
GAGAGGAAGCTTATGCATGCCTACAATGAAAAACCTGTTCTTTCACGTCCTCAACACGAG
TTTTACAAGGGAGAGAATTACTTTGAGATTGACATAGATATGCATAGATTCAGTTACATC
TCTAGGAAGGGTTTTGAAACATTCCTAGATAGACTAAAGCTCTGTTGCTTGGATGTTGGG
CTAACAATTCAGGGAAACAAAGTTGAAGAATTGCCGGAGCAGGTTTTATGTTGTGTACGG
TTAAATGAAATTGACTATGCGAATTATCAGCAACTGGGGTTGGAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400039225
PEP Infomation

pacid=37444752 transcript=PGSC0003DMT400058282 locus=PGSC0003DMG400022628 ID=PGSC0003DMT400058282.v4.03 annot-version=v4.03
Sequence

MGGCVSRPDGCAGGRLGGSRRKSRKRRKAVKKRVSSHVSDRSAADKVDKSFPLDRSFNNP
AFNGSTEEAWFDSSARFESDGSDEDFQSVADDVLSLNGSDCGRTSVASATDVHHGDVDVN
AHHRLSSDLQRQGELSTSNPACSSDSGSAKTSINPSSMLRPKDADSKMRLDGPHSEVQPV
FLDEISSSANGSSRREDGLLDNCGILSNNCLPCLASTVAPVEKRQSLSASSPSAKKKAAI
KLPFKWKEENPVAALLSSKALLQRPIAGSQVPVCRLEKKMADSWSHIEPGTFRVRGENYF
RDKKKVFASNYAAYYPFGVDVFLSQRKIFHIARLVELPFIEQSGTLPPILVVNVQIPLYP
TSIFQGETDGEGMSFVLYFKLSESYAKELPPHFQESIKRLIDDEVEKVKAFPVEHTAPFR
ERLKILGRVANMEELPLSAAERKLMHAYNEKPVLSRPQHEFYKGENYFEIDIDMHRFSYI
SRKGFETFLDRLKLCCLDVGLTIQGNKVEELPEQVLCCVRLNEIDYANYQQLGLE*

Transcript Sequence

Transcript ID

PGSC0003DMT400058282
Transcript Infomation

pacid=37444752 locus=PGSC0003DMG400022628 ID=PGSC0003DMT400058282.v4.03 annot-version=v4.03
Sequence

ATGGGGGGTTGTGTTTCAAGACCAGATGGTTGTGCTGGAGGTAGATTAGGTGGTTCAAGG
AGAAAGAGTAGGAAGAGAAGAAAAGCTGTAAAGAAAAGGGTGTCTTCTCATGTATCAGAT
CGATCAGCAGCTGATAAAGTTGACAAGTCTTTCCCTTTGGATCGTTCTTTCAATAATCCC
GCTTTTAATGGAAGTACTGAAGAAGCTTGGTTTGATTCTTCTGCAAGATTTGAATCTGAT
GGCAGTGATGAAGATTTCCAGAGTGTTGCTGATGATGTGCTTTCTCTCAACGGCTCTGAT
TGTGGGCGGACTAGTGTTGCTTCAGCAACAGATGTCCACCATGGGGATGTTGATGTCAAT
GCCCACCACAGGTTATCCTCCGACCTGCAGAGGCAAGGAGAATTATCAACAAGCAATCCT
GCTTGTAGCTCTGATAGTGGTTCAGCTAAAACGTCAATCAACCCAAGCAGTATGTTGCGT
CCAAAAGATGCAGACTCAAAAATGAGACTTGATGGACCTCACAGTGAGGTACAACCTGTG
TTCCTTGATGAAATCTCTTCCTCTGCTAATGGAAGCAGTAGAAGGGAGGATGGCTTGTTG
GATAACTGTGGAATTCTTTCAAACAACTGTTTGCCCTGTCTTGCATCCACGGTTGCACCA
GTTGAGAAGAGACAATCTCTTAGCGCTAGTTCTCCAAGTGCAAAGAAGAAAGCTGCCATA
AAACTTCCTTTCAAATGGAAAGAAGAAAATCCTGTTGCTGCTTTACTTTCATCTAAAGCC
CTGCTTCAAAGACCAATAGCTGGTTCCCAAGTACCAGTTTGCCGGTTGGAGAAGAAAATG
GCTGATAGTTGGTCCCATATTGAACCGGGCACTTTCAGGGTTCGAGGAGAAAACTACTTC
AGGGATAAAAAGAAGGTGTTTGCTTCAAATTATGCAGCATATTATCCTTTTGGAGTTGAT
GTATTTTTAAGCCAGAGAAAAATATTTCATATTGCCCGACTTGTGGAACTTCCTTTCATT
GAACAATCTGGAACACTTCCTCCCATCCTTGTTGTGAATGTTCAGATCCCGTTATATCCT
ACCTCAATTTTTCAAGGTGAAACTGATGGTGAAGGGATGAGTTTTGTTTTGTATTTTAAG
CTTTCAGAAAGTTACGCCAAGGAACTTCCTCCTCATTTTCAAGAGAGTATCAAGAGGCTG
ATTGATGATGAAGTGGAAAAAGTAAAGGCTTTTCCTGTTGAACATACTGCACCCTTTAGG
GAACGATTGAAGATATTAGGTCGTGTAGCAAATATGGAGGAACTCCCATTAAGTGCAGCA
GAGAGGAAGCTTATGCATGCCTACAATGAAAAACCTGTTCTTTCACGTCCTCAACACGAG
TTTTACAAGGGAGAGAATTACTTTGAGATTGACATAGATATGCATAGATTCAGTTACATC
TCTAGGAAGGGTTTTGAAACATTCCTAGATAGACTAAAGCTCTGTTGCTTGGATGTTGGG
CTAACAATTCAGGGAAACAAAGTTGAAGAATTGCCGGAGCAGGTTTTATGTTGTGTACGG
TTAAATGAAATTGACTATGCGAATTATCAGCAACTGGGGTTGGAATAG