Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058280
CDS Infomation

pacid=37445150 polypeptide=PGSC0003DMP400039224 locus=PGSC0003DMG400022627 ID=PGSC0003DMT400058280.v4.03 annot-version=v4.03
Sequence

ATGAAACGAGCTAAGTTCGACTCTGTAATGTCAGTGAGTCGACTCAGATCGATTCAAGTT
TTGATGGGTTTGTTGTTTTTGTATTTTTTCTTGGTTACTTTGGAAATACCTTTGATTTCT
AAACTTGGGTTTGGGTTAGAATCCTATGAACTTATTTCTACACCTTTTGATAATAATTCC
AAGTTTAGCAGGCTTAATAGTGTTGGTGAGTTGAGTGGTTCGAGTCAAGATTCAGTTTTT
CCTTCAAGGGTTATGTCAAGGAGAGCTAAAATGGGGTTTTCATTACCTCATAGGAAGATG
GTAGAGTTTAAGAGAATTTCAGGTTTGGTTTTTGATGAGAAGGTGTTTGATAGTTTTGAT
AAGGAAGAGTTTTCTGAGCTGCATAAGGTTGTTAGGGATGCTTTTGTAGCTGGGAAGAAA
CTGTTTCAGGATATCGAATCGGGGAAAGTTCAGGGGGAGGTAGTGAGTGGGACTCAGAAT
CGGACTGAGTCGTGTCCTGACTCGGTGTCTTTGTGGGGTAGTGAGTTTGTGGCTGGTGGG
AAGATTATGGTGATACCTTGTGGAATGACTTTAGGGTCTCATATAACAGTGGTGGGGACG
CCTCGGTGGGCCCATGAAGAGAAGGATCCTAAAATTACATTGGTGAAGGATGATGATGAG
ATTGTGATGGTTTCACAGTTTATGATGGAGTTGCAAGGATTGAAGACAGTTGATGGTGAG
GACCCTCCAAGAATACTGCATTTCAATCCGAGGTTGAAAGGGGATTGGAGTGGAAGGCCA
GTGATCGAGCAGAATACGTGTTATAGGATGCAGTGGGGGTCTGCGATGAGGTGTGACGGT
TGGAAATCCAAGCCTAGTGAGGACACTGTGGACGGACAGGTGAAATGTGAGAAGTGGATA
CGTGATGATGATGATCACTCTGAAGAATCAAAGGCCACGTGGTGGTTGAAGAGACTGATT
GGTGGGAGGACAAAGAAGGTTTCAATTGACTGGCCATACCCTTTTGTAGAGAAGAAGTTG
TTTGTGCTTACTGTCAGTGCTGGCTTAGAAGGTTATCACATCAATGTAGATGGGAGACAT
ATTACTTCCTTTCCTTATCGCACTGGTTTTACTCTTGAGGATGCGACCGGTCTGTTTGTT
AATGGGGATATTGACGTGCATTCTGTATTTGCTGCTTCATTACCTTCAACGCATCCAAGT
TTTGCTCCACAGAGGCATTTAGAAATGTTACCCAAGTGGCAAGCTCCGCCACTTCCAGAT
GAACCTGTAGAGCTTTTTATTGGCATCCTTTCTGCAGGGAATCATTTTTCTGAGAGAATG
GCTGTGAGAAAATCTTGGATGCAGCATCCATCACTTAAGTCTTCAAATGTAGTAGCCCGT
TTTTTTGTGGCAATGCATGGAAGAAAAGAGATAAATGTGGAGCTCATGAAAGAAGCAGAT
TTTTTTGGCGATATAGTTATAGTCCCATACATGGACAATTACGATCTTGTTGTATTGAAG
ACAGTAGCAATCTGTGAATATGGGGTCCGTACAGTTGCGGCAAAGTATGTAATGAAGTGT
GATGATGACACATTTGTAAGGATTGATGCTGTGATGAAGGAAGTTAAGAAAGTCCCTAGA
GGTAGAAGCCTGTATGTTGGTAACATCAATTACTACCATAAGCCCCTTCGACATGGTAAA
TGGGCAGTCACCTATGAGGAATGGCCTGAAGAAGATTATCCACCCTACGCCAATGGGCCT
GGTTACATCATCTCATTTGACATCGCAGAGTATGTAGTTTCCGAGTTTGAGAAACATAAG
CTGAGGTTGTTTAAGATGGAGGACGTGAGCATGGGAATGTGGGTAGAACAGTTCAACAGC
TCAAGGGCCGTAGAGTACGTGCATAGCTTGAAGTTTTGTCAGTTTGGGTGCATTGATGAT
TATTACACTGCACATTATCAATCTCCAAGGCAAATGATCTGCCTGTGGAGAAAGTTGCTG
AACCAAGGGAAACCTCAGTGCTGTAACGTGAGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400039224
PEP Infomation

pacid=37445150 transcript=PGSC0003DMT400058280 locus=PGSC0003DMG400022627 ID=PGSC0003DMT400058280.v4.03 annot-version=v4.03
Sequence

MKRAKFDSVMSVSRLRSIQVLMGLLFLYFFLVTLEIPLISKLGFGLESYELISTPFDNNS
KFSRLNSVGELSGSSQDSVFPSRVMSRRAKMGFSLPHRKMVEFKRISGLVFDEKVFDSFD
KEEFSELHKVVRDAFVAGKKLFQDIESGKVQGEVVSGTQNRTESCPDSVSLWGSEFVAGG
KIMVIPCGMTLGSHITVVGTPRWAHEEKDPKITLVKDDDEIVMVSQFMMELQGLKTVDGE
DPPRILHFNPRLKGDWSGRPVIEQNTCYRMQWGSAMRCDGWKSKPSEDTVDGQVKCEKWI
RDDDDHSEESKATWWLKRLIGGRTKKVSIDWPYPFVEKKLFVLTVSAGLEGYHINVDGRH
ITSFPYRTGFTLEDATGLFVNGDIDVHSVFAASLPSTHPSFAPQRHLEMLPKWQAPPLPD
EPVELFIGILSAGNHFSERMAVRKSWMQHPSLKSSNVVARFFVAMHGRKEINVELMKEAD
FFGDIVIVPYMDNYDLVVLKTVAICEYGVRTVAAKYVMKCDDDTFVRIDAVMKEVKKVPR
GRSLYVGNINYYHKPLRHGKWAVTYEEWPEEDYPPYANGPGYIISFDIAEYVVSEFEKHK
LRLFKMEDVSMGMWVEQFNSSRAVEYVHSLKFCQFGCIDDYYTAHYQSPRQMICLWRKLL
NQGKPQCCNVR*

Transcript Sequence

Transcript ID

PGSC0003DMT400058280
Transcript Infomation

pacid=37445150 locus=PGSC0003DMG400022627 ID=PGSC0003DMT400058280.v4.03 annot-version=v4.03
Sequence

ATGAAACGAGCTAAGTTCGACTCTGTAATGTCAGTGAGTCGACTCAGATCGATTCAAGTT
TTGATGGGTTTGTTGTTTTTGTATTTTTTCTTGGTTACTTTGGAAATACCTTTGATTTCT
AAACTTGGGTTTGGGTTAGAATCCTATGAACTTATTTCTACACCTTTTGATAATAATTCC
AAGTTTAGCAGGCTTAATAGTGTTGGTGAGTTGAGTGGTTCGAGTCAAGATTCAGTTTTT
CCTTCAAGGGTTATGTCAAGGAGAGCTAAAATGGGGTTTTCATTACCTCATAGGAAGATG
GTAGAGTTTAAGAGAATTTCAGGTTTGGTTTTTGATGAGAAGGTGTTTGATAGTTTTGAT
AAGGAAGAGTTTTCTGAGCTGCATAAGGTTGTTAGGGATGCTTTTGTAGCTGGGAAGAAA
CTGTTTCAGGATATCGAATCGGGGAAAGTTCAGGGGGAGGTAGTGAGTGGGACTCAGAAT
CGGACTGAGTCGTGTCCTGACTCGGTGTCTTTGTGGGGTAGTGAGTTTGTGGCTGGTGGG
AAGATTATGGTGATACCTTGTGGAATGACTTTAGGGTCTCATATAACAGTGGTGGGGACG
CCTCGGTGGGCCCATGAAGAGAAGGATCCTAAAATTACATTGGTGAAGGATGATGATGAG
ATTGTGATGGTTTCACAGTTTATGATGGAGTTGCAAGGATTGAAGACAGTTGATGGTGAG
GACCCTCCAAGAATACTGCATTTCAATCCGAGGTTGAAAGGGGATTGGAGTGGAAGGCCA
GTGATCGAGCAGAATACGTGTTATAGGATGCAGTGGGGGTCTGCGATGAGGTGTGACGGT
TGGAAATCCAAGCCTAGTGAGGACACTGTGGACGGACAGGTGAAATGTGAGAAGTGGATA
CGTGATGATGATGATCACTCTGAAGAATCAAAGGCCACGTGGTGGTTGAAGAGACTGATT
GGTGGGAGGACAAAGAAGGTTTCAATTGACTGGCCATACCCTTTTGTAGAGAAGAAGTTG
TTTGTGCTTACTGTCAGTGCTGGCTTAGAAGGTTATCACATCAATGTAGATGGGAGACAT
ATTACTTCCTTTCCTTATCGCACTGGTTTTACTCTTGAGGATGCGACCGGTCTGTTTGTT
AATGGGGATATTGACGTGCATTCTGTATTTGCTGCTTCATTACCTTCAACGCATCCAAGT
TTTGCTCCACAGAGGCATTTAGAAATGTTACCCAAGTGGCAAGCTCCGCCACTTCCAGAT
GAACCTGTAGAGCTTTTTATTGGCATCCTTTCTGCAGGGAATCATTTTTCTGAGAGAATG
GCTGTGAGAAAATCTTGGATGCAGCATCCATCACTTAAGTCTTCAAATGTAGTAGCCCGT
TTTTTTGTGGCAATGCATGGAAGAAAAGAGATAAATGTGGAGCTCATGAAAGAAGCAGAT
TTTTTTGGCGATATAGTTATAGTCCCATACATGGACAATTACGATCTTGTTGTATTGAAG
ACAGTAGCAATCTGTGAATATGGGGTCCGTACAGTTGCGGCAAAGTATGTAATGAAGTGT
GATGATGACACATTTGTAAGGATTGATGCTGTGATGAAGGAAGTTAAGAAAGTCCCTAGA
GGTAGAAGCCTGTATGTTGGTAACATCAATTACTACCATAAGCCCCTTCGACATGGTAAA
TGGGCAGTCACCTATGAGGAATGGCCTGAAGAAGATTATCCACCCTACGCCAATGGGCCT
GGTTACATCATCTCATTTGACATCGCAGAGTATGTAGTTTCCGAGTTTGAGAAACATAAG
CTGAGGTTGTTTAAGATGGAGGACGTGAGCATGGGAATGTGGGTAGAACAGTTCAACAGC
TCAAGGGCCGTAGAGTACGTGCATAGCTTGAAGTTTTGTCAGTTTGGGTGCATTGATGAT
TATTACACTGCACATTATCAATCTCCAAGGCAAATGATCTGCCTGTGGAGAAAGTTGCTG
AACCAAGGGAAACCTCAGTGCTGTAACGTGAGATGA