Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058254
CDS Infomation

pacid=37442659 polypeptide=PGSC0003DMP400039203 locus=PGSC0003DMG400022618 ID=PGSC0003DMT400058254.v4.03 annot-version=v4.03
Sequence

ATGGGAATTTGGGGGATTAGTGCAAGGAGTAGGAATTGGCTTGGCCTCTGCAACATCAGT
TGGCGAATGAGTAGACAGTCGTTCAAGCACATTGGTCGAAGAACATTTTCAGACTCTTAC
ACTGTCCAAAGTGACGATTCTGTCTTGCCAGTGTTGATTATTGGTGCTGGTCCAGTTGGG
ATGACTCTCTCCATACTTCTAACGAAACTAGGTGTAAAATGTGCGATCTTAGAGAAGAAC
AAGGCCTTTTCCACACATCCTCAAGCACACTTCATCAACAACCGGTCTATGGAGGTATTT
CGCAAATTGGATGGTCTTGGAGATGAGATTCTAAGGTCTCAACCACCAGTAGAGTTTTGG
AGAAAGTTTATATACTGTACTTCACTGACGGGGCCTATTTTAGGTGCTGTTGATCATATG
CAACCTCAAGATTTTGATCAGATTGCGAGTCCTGTCTCTGTTGCACACTTCTCCCAGTAC
AAGCTCTCCAGATTGCTGCTTAAGCACCTTGAGAAACTTGGTTTCCATATGGTAAACTCT
GAAAAGCGTGAGCATGGCTCTATTGGTGAGAGGGAGATCCTTATGGGGCATGAGTGCATT
GCAGTCAATGGTGCTGAGCGTGGTGTCACTGTAACAGCCTCTTTCCTTTCTAAAGGGAAG
TATATGACGAGAGATATTCAGTGCCATTTCCTTGTTGGTACAGATGGTGCAGGAAGTAGT
GTCAGAAAGTCCTTAGGAATCAACATGAGAGGTGAAAAGGACTTGCAAAAGCTTGTTAGT
GTCCACTTCCTGAGCCAAGAATTAGGGCAGTATCTCATTAAAGAAAGACCCGGCATGCTG
TTTTTCATCTTTAATAGAGAGGCTATTGGTGTTCTTGTTGCCCATGATCTCAAGCAAGGG
GAATTTGTCCTGCAGGTACCATTTTATCCACCTCAACAGAAGCTTGAGGACTTTAGTTCT
GAGATGTGTAAGAGATTGATCTTCAAATTGGCTGGCCTAGAGCTTGCAGACGTCAACGTG
ATGGATATTAAGCCTTGGGTGATGCATGCGGAAGTAGCTGAGAAGTTTCTATCTTGTAAC
AACAGGATAATACTTGCTGGTGATGCAGCTCATCGATTTCCTCCTGCTGGTGGTTTCGGG
ATGAATACTGGTATTCAAGATGCTCATAATCTTGCTTGGAAATTAGCTTCTGTAATTGAG
GGTGTCTCACCAATATCAATTCTTAACTCTTATGAACTAGAACGCAGTCAGATAGCTCAA
TTTAATACAGCACTTAGCGTCCAAAACTTTAAAGCAGCAATGAAAGTTCCTGCTGCACTT
GGTCTTGATCCAACTGTAGCAAATGCAGTACATCGAGCTCTTAATGACACTGTTGGTTCC
ATTCTGCCATCTGTACTTCAAAGGACAATATTAGATGGAATATTCAGCATAGGTCGTGCA
CAACTCTCAGATTTTGTATTGAATGAAAATAATCCACTTGGATCTGCAAGGCTAGCCAAA
TTAAGACAGATATTTGAAGAAGGACAGAGCCTTCAGCTCCAGTTCCCTGCTGAGGATCTT
GGTTTCAGGTATCGGAAAGGAGCATTGGTGTCTGAAGATGACAGTGTGTTGAATGTGCAT
GAAGCACCAACAGGACGAAGAAGGGATTATATTCCTTGTTTGGAACCTGGATCAAGGCTC
CCTCATATGAATGTTAAACTGCTTTCTAACCCGTCAAGCAAGGAAATATTCTCTACTCTA
GACCTCGTATCTATAGATAAGGTTGAGTTTGTCCTTATAATAGCGCCATTCAAGGAGTCC
TACTGTCTGGCTCGAGCTGCGCTAGAGGTGGCCAACAAATTAAAACTCCCTTTAAAGGTT
TGTGTAATGTGGCCAAACGGAAGTATTGACGGAGCTGGAAGAACTGAGGCTGCATTGACA
CCCTGGAAATCTTTTGAAGAAGTTGTGGAAGTGAAGAGGTCATCAGATTCGCCATCCTGG
TGGGACATCTGTCAAATGACAGACAGAGGAGCCATATTAGTGAGACCTGATGAACACGTT
GCTTGGCGTACAAAATCCAGAATTGCAGATCCCATCATGACGATGAAAAGCGTTTTCCAT
ATTGTTACAGGAGTTGATTGCATCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400039203
PEP Infomation

pacid=37442659 transcript=PGSC0003DMT400058254 locus=PGSC0003DMG400022618 ID=PGSC0003DMT400058254.v4.03 annot-version=v4.03
Sequence

MGIWGISARSRNWLGLCNISWRMSRQSFKHIGRRTFSDSYTVQSDDSVLPVLIIGAGPVG
MTLSILLTKLGVKCAILEKNKAFSTHPQAHFINNRSMEVFRKLDGLGDEILRSQPPVEFW
RKFIYCTSLTGPILGAVDHMQPQDFDQIASPVSVAHFSQYKLSRLLLKHLEKLGFHMVNS
EKREHGSIGEREILMGHECIAVNGAERGVTVTASFLSKGKYMTRDIQCHFLVGTDGAGSS
VRKSLGINMRGEKDLQKLVSVHFLSQELGQYLIKERPGMLFFIFNREAIGVLVAHDLKQG
EFVLQVPFYPPQQKLEDFSSEMCKRLIFKLAGLELADVNVMDIKPWVMHAEVAEKFLSCN
NRIILAGDAAHRFPPAGGFGMNTGIQDAHNLAWKLASVIEGVSPISILNSYELERSQIAQ
FNTALSVQNFKAAMKVPAALGLDPTVANAVHRALNDTVGSILPSVLQRTILDGIFSIGRA
QLSDFVLNENNPLGSARLAKLRQIFEEGQSLQLQFPAEDLGFRYRKGALVSEDDSVLNVH
EAPTGRRRDYIPCLEPGSRLPHMNVKLLSNPSSKEIFSTLDLVSIDKVEFVLIIAPFKES
YCLARAALEVANKLKLPLKVCVMWPNGSIDGAGRTEAALTPWKSFEEVVEVKRSSDSPSW
WDICQMTDRGAILVRPDEHVAWRTKSRIADPIMTMKSVFHIVTGVDCI*

Transcript Sequence

Transcript ID

PGSC0003DMT400058254
Transcript Infomation

pacid=37442659 locus=PGSC0003DMG400022618 ID=PGSC0003DMT400058254.v4.03 annot-version=v4.03
Sequence

ATGGGAATTTGGGGGATTAGTGCAAGGAGTAGGAATTGGCTTGGCCTCTGCAACATCAGT
TGGCGAATGAGTAGACAGTCGTTCAAGCACATTGGTCGAAGAACATTTTCAGACTCTTAC
ACTGTCCAAAGTGACGATTCTGTCTTGCCAGTGTTGATTATTGGTGCTGGTCCAGTTGGG
ATGACTCTCTCCATACTTCTAACGAAACTAGGTGTAAAATGTGCGATCTTAGAGAAGAAC
AAGGCCTTTTCCACACATCCTCAAGCACACTTCATCAACAACCGGTCTATGGAGGTATTT
CGCAAATTGGATGGTCTTGGAGATGAGATTCTAAGGTCTCAACCACCAGTAGAGTTTTGG
AGAAAGTTTATATACTGTACTTCACTGACGGGGCCTATTTTAGGTGCTGTTGATCATATG
CAACCTCAAGATTTTGATCAGATTGCGAGTCCTGTCTCTGTTGCACACTTCTCCCAGTAC
AAGCTCTCCAGATTGCTGCTTAAGCACCTTGAGAAACTTGGTTTCCATATGGTAAACTCT
GAAAAGCGTGAGCATGGCTCTATTGGTGAGAGGGAGATCCTTATGGGGCATGAGTGCATT
GCAGTCAATGGTGCTGAGCGTGGTGTCACTGTAACAGCCTCTTTCCTTTCTAAAGGGAAG
TATATGACGAGAGATATTCAGTGCCATTTCCTTGTTGGTACAGATGGTGCAGGAAGTAGT
GTCAGAAAGTCCTTAGGAATCAACATGAGAGGTGAAAAGGACTTGCAAAAGCTTGTTAGT
GTCCACTTCCTGAGCCAAGAATTAGGGCAGTATCTCATTAAAGAAAGACCCGGCATGCTG
TTTTTCATCTTTAATAGAGAGGCTATTGGTGTTCTTGTTGCCCATGATCTCAAGCAAGGG
GAATTTGTCCTGCAGGTACCATTTTATCCACCTCAACAGAAGCTTGAGGACTTTAGTTCT
GAGATGTGTAAGAGATTGATCTTCAAATTGGCTGGCCTAGAGCTTGCAGACGTCAACGTG
ATGGATATTAAGCCTTGGGTGATGCATGCGGAAGTAGCTGAGAAGTTTCTATCTTGTAAC
AACAGGATAATACTTGCTGGTGATGCAGCTCATCGATTTCCTCCTGCTGGTGGTTTCGGG
ATGAATACTGGTATTCAAGATGCTCATAATCTTGCTTGGAAATTAGCTTCTGTAATTGAG
GGTGTCTCACCAATATCAATTCTTAACTCTTATGAACTAGAACGCAGTCAGATAGCTCAA
TTTAATACAGCACTTAGCGTCCAAAACTTTAAAGCAGCAATGAAAGTTCCTGCTGCACTT
GGTCTTGATCCAACTGTAGCAAATGCAGTACATCGAGCTCTTAATGACACTGTTGGTTCC
ATTCTGCCATCTGTACTTCAAAGGACAATATTAGATGGAATATTCAGCATAGGTCGTGCA
CAACTCTCAGATTTTGTATTGAATGAAAATAATCCACTTGGATCTGCAAGGCTAGCCAAA
TTAAGACAGATATTTGAAGAAGGACAGAGCCTTCAGCTCCAGTTCCCTGCTGAGGATCTT
GGTTTCAGGTATCGGAAAGGAGCATTGGTGTCTGAAGATGACAGTGTGTTGAATGTGCAT
GAAGCACCAACAGGACGAAGAAGGGATTATATTCCTTGTTTGGAACCTGGATCAAGGCTC
CCTCATATGAATGTTAAACTGCTTTCTAACCCGTCAAGCAAGGAAATATTCTCTACTCTA
GACCTCGTATCTATAGATAAGGTTGAGTTTGTCCTTATAATAGCGCCATTCAAGGAGTCC
TACTGTCTGGCTCGAGCTGCGCTAGAGGTGGCCAACAAATTAAAACTCCCTTTAAAGGTT
TGTGTAATGTGGCCAAACGGAAGTATTGACGGAGCTGGAAGAACTGAGGCTGCATTGACA
CCCTGGAAATCTTTTGAAGAAGTTGTGGAAGTGAAGAGGTCATCAGATTCGCCATCCTGG
TGGGACATCTGTCAAATGACAGACAGAGGAGCCATATTAGTGAGACCTGATGAACACGTT
GCTTGGCGTACAAAATCCAGAATTGCAGATCCCATCATGACGATGAAAAGCGTTTTCCAT
ATTGTTACAGGAGTTGATTGCATCTGA