Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058237
CDS Infomation

pacid=37443563 polypeptide=PGSC0003DMP400039190 locus=PGSC0003DMG401022613 ID=PGSC0003DMT400058237.v4.03 annot-version=v4.03
Sequence

ATGGAGTGCGCCGGCAGGGGAAGCCGAACCCCATGTTCCGGTCCGGCGATGAGACGTTGC
CGTCGCTGCCAAGCTGTGGCTTATTGCTCCATCTCTCACCAGGTATCACATGGGAATGTA
CACAAGAAAGAGTGTCAAAGGTTGGAACAGCAAATGAAGCATGCACATGTTGTGAGTGAT
TTCCCTTTTAGATTTTCTGAAGAAGCTACTATGCAGGTGTGTGATAAACGGGAAACAAGG
TGTTCGTTCTTGATAAAACAGGGAGTTCACCGTTTAGGAATGTGGACGTTTGAATGTAGC
TGTGGGGCATCAACTGATATATTTGATTGCTCAAGGCTCATGAAAGACTGGAACCTATCC
ATTACACTGTGTCCTTGTAGAGAGCCATCCACTCCGTTACCAAAGTTACTTAGTGGTTGG
AAAGAATATTATGAATGGAGGTGCATTCCGCTTGATTCTCCTGTTGCTTTGCTACTTCAC
TGGCCATTGACGTTGTATTGGGCTATTAAGCTGGCAGATCAAGGGAACCTGACTCCTGAA
ATTAGTAATGAGCTATGCATACATTATTTAGGTCCTGAAAAAGAGCTTCATCAGCTTTCA
GTGTTCAGTGAGCTGCATGCAGTTTTTCCTGATGTTCGAATACATATTGATCTTGTGGGA
CCTGCAGTTCCAGAAGAAAGGAATGGTGAGAGAATTGAACTTCGTGATTATGCTCATTGT
ACAGAGACCAACTGCAAGTGTAACTGTTCGGCTGAGAGTTTTGGCCCAACATCATTACAA
AGTGGATCTTCAGCCGTTACATTAAAGCTTCATAATGGTTATTATCATGATTGTTATAAA
GATCTTATGAAGGATACTCCTCCTAATCTAATTATTGCACCGAATGCTGGTGTCGCTGCT
TACAGAAGCTGGCTACAAACCATTGAGCTGATAAATGAGATAAAAGTTCCAGCATTTTTC
TCCGATTACTGTGAAGAAGCTTGTAATCTGGCAACTAGATGCATAAGCTCTGTCACTGGG
GCTTCTCCTACCATTCCTATCCAACTAAATCCTTTTAGGCAACCCCTTGCAGTAGAAGAC
AGTGCCCTGTTTCTTCCATGCTACTCAAATTGCTTCATCTTTGGGATTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400039190
PEP Infomation

pacid=37443563 transcript=PGSC0003DMT400058237 locus=PGSC0003DMG401022613 ID=PGSC0003DMT400058237.v4.03 annot-version=v4.03
Sequence

MECAGRGSRTPCSGPAMRRCRRCQAVAYCSISHQVSHGNVHKKECQRLEQQMKHAHVVSD
FPFRFSEEATMQVCDKRETRCSFLIKQGVHRLGMWTFECSCGASTDIFDCSRLMKDWNLS
ITLCPCREPSTPLPKLLSGWKEYYEWRCIPLDSPVALLLHWPLTLYWAIKLADQGNLTPE
ISNELCIHYLGPEKELHQLSVFSELHAVFPDVRIHIDLVGPAVPEERNGERIELRDYAHC
TETNCKCNCSAESFGPTSLQSGSSAVTLKLHNGYYHDCYKDLMKDTPPNLIIAPNAGVAA
YRSWLQTIELINEIKVPAFFSDYCEEACNLATRCISSVTGASPTIPIQLNPFRQPLAVED
SALFLPCYSNCFIFGI*

Transcript Sequence

Transcript ID

PGSC0003DMT400058237
Transcript Infomation

pacid=37443563 locus=PGSC0003DMG401022613 ID=PGSC0003DMT400058237.v4.03 annot-version=v4.03
Sequence

ATGGAGTGCGCCGGCAGGGGAAGCCGAACCCCATGTTCCGGTCCGGCGATGAGACGTTGC
CGTCGCTGCCAAGCTGTGGCTTATTGCTCCATCTCTCACCAGGTATCACATGGGAATGTA
CACAAGAAAGAGTGTCAAAGGTTGGAACAGCAAATGAAGCATGCACATGTTGTGAGTGAT
TTCCCTTTTAGATTTTCTGAAGAAGCTACTATGCAGGTGTGTGATAAACGGGAAACAAGG
TGTTCGTTCTTGATAAAACAGGGAGTTCACCGTTTAGGAATGTGGACGTTTGAATGTAGC
TGTGGGGCATCAACTGATATATTTGATTGCTCAAGGCTCATGAAAGACTGGAACCTATCC
ATTACACTGTGTCCTTGTAGAGAGCCATCCACTCCGTTACCAAAGTTACTTAGTGGTTGG
AAAGAATATTATGAATGGAGGTGCATTCCGCTTGATTCTCCTGTTGCTTTGCTACTTCAC
TGGCCATTGACGTTGTATTGGGCTATTAAGCTGGCAGATCAAGGGAACCTGACTCCTGAA
ATTAGTAATGAGCTATGCATACATTATTTAGGTCCTGAAAAAGAGCTTCATCAGCTTTCA
GTGTTCAGTGAGCTGCATGCAGTTTTTCCTGATGTTCGAATACATATTGATCTTGTGGGA
CCTGCAGTTCCAGAAGAAAGGAATGGTGAGAGAATTGAACTTCGTGATTATGCTCATTGT
ACAGAGACCAACTGCAAGTGTAACTGTTCGGCTGAGAGTTTTGGCCCAACATCATTACAA
AGTGGATCTTCAGCCGTTACATTAAAGCTTCATAATGGTTATTATCATGATTGTTATAAA
GATCTTATGAAGGATACTCCTCCTAATCTAATTATTGCACCGAATGCTGGTGTCGCTGCT
TACAGAAGCTGGCTACAAACCATTGAGCTGATAAATGAGATAAAAGTTCCAGCATTTTTC
TCCGATTACTGTGAAGAAGCTTGTAATCTGGCAACTAGATGCATAAGCTCTGTCACTGGG
GCTTCTCCTACCATTCCTATCCAACTAAATCCTTTTAGGCAACCCCTTGCAGTAGAAGAC
AGTGCCCTGTTTCTTCCATGCTACTCAAATTGCTTCATCTTTGGGATTTGA