Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058230
CDS Infomation

pacid=37443425 polypeptide=PGSC0003DMP400039185 locus=PGSC0003DMG400022611 ID=PGSC0003DMT400058230.v4.03 annot-version=v4.03
Sequence

ATGGATTTCAAGCTCCTCTCTTTTCTCATCTTCCACTACTTCCTAATCAATTCATCATCA
ATCTATGCATCTCTTCCATTCCCTAAACAATCTCTCCCTACCAAGTCCGGCTACCTCACC
GTCAATGACACAACCAGCTCCGCCATTTTCTACACATTCTACGAAGCTCAAAACCTCACC
ACACCTCTTTCTCAAACCCCACTTCTCATTTGGCTTCAAGGCGGACCTGGATGCTCCTCT
ATGCTCGGAAACTTCTACGAATTAGGCCCTTGGCGAGTCTCTTCTTCTCACAGGCAAAAC
GTCGAACATGTAGCGCTCAATCCTAATCCTAGATCTTGGAATCGGATTTTTGGGCTCCTT
TTCCTTGATAATCCCATTGGTGTTGGATTTAGCATTGCTGCAACACCTGAAGAAATCCCG
AGGAACCAAAAAGACGTGGCGAAGCACTTATATATCGCGATCAAAAAGTTTATCGAGCTG
AATAAATCATTCAAGGATCGGCCTATTTACATCACGGGTGAGAGTTATGCTGGCAAATAT
GTGCCAGCAATTGGATATCAAGTTTTGAAGAAAAATGTCAGGTTGCCGGTTCGTAGTAGA
GTGAATTTGGTTGGTGTTGTCATTGGCAACGGACTAACTGATCCGATTAGCCAAGTTGCT
ACTCATGCTGCAAATGCGTATTACTTTGGATTGATAAATGACAAACAAAGGGGACAACTA
GAGTTGCTTCAAGAAAAGGCGATTTCATTGGCAAAGAATGGTGATTGGAGTGAAGCAACG
AATGCTCGAAGTAAAGTCTTGAACACATTACAAAACATGACTGAAATGCCAACTTTGTAT
AACATTAGAAGGCATAAGCCATACCAAAACCATCTGGTAGCTGAGTTTTTGAACAATGTT
GAGGTGAAAAAGGCGTTGGGAGTGAATGAAACTATTGTTTTCGAGGTGTGTAGTAAGGTG
GTGAGGGAAGCATTACACGAAGATTTGATGAAGAGTGTGAAGTATATGGTGGAGTTTCTT
GTCAAGAATACTAAAGTTTTGTTGTATGAAGGTCAGTTGGATTTGAGAGTTGGCTTGGTG
TCAACCGAGGCGTGGGTGAAGAGAATGAAGTGGGAAGGAATCGACAAGTTCTTGGAAGCA
GATAGGAAAGTTTGGAGAGTTAATGGCGGGCTAGCAGGGTATGTGCAGAAATGGAGGAAC
TTAAGCCATGTTGTGGTATTGAATGCTGGACATTTGGTTCCACATGATCAACCATTGAAT
TCTCAGGCCATGATTGAAGATTGGGTACTTGAAAAGGGAGTTTTTGCTAATGATCAAATT
GAAAACTTGTCCACCAATTTGTTTGATGTACTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400039185
PEP Infomation

pacid=37443425 transcript=PGSC0003DMT400058230 locus=PGSC0003DMG400022611 ID=PGSC0003DMT400058230.v4.03 annot-version=v4.03
Sequence

MDFKLLSFLIFHYFLINSSSIYASLPFPKQSLPTKSGYLTVNDTTSSAIFYTFYEAQNLT
TPLSQTPLLIWLQGGPGCSSMLGNFYELGPWRVSSSHRQNVEHVALNPNPRSWNRIFGLL
FLDNPIGVGFSIAATPEEIPRNQKDVAKHLYIAIKKFIELNKSFKDRPIYITGESYAGKY
VPAIGYQVLKKNVRLPVRSRVNLVGVVIGNGLTDPISQVATHAANAYYFGLINDKQRGQL
ELLQEKAISLAKNGDWSEATNARSKVLNTLQNMTEMPTLYNIRRHKPYQNHLVAEFLNNV
EVKKALGVNETIVFEVCSKVVREALHEDLMKSVKYMVEFLVKNTKVLLYEGQLDLRVGLV
STEAWVKRMKWEGIDKFLEADRKVWRVNGGLAGYVQKWRNLSHVVVLNAGHLVPHDQPLN
SQAMIEDWVLEKGVFANDQIENLSTNLFDVL*

Transcript Sequence

Transcript ID

PGSC0003DMT400058230
Transcript Infomation

pacid=37443425 locus=PGSC0003DMG400022611 ID=PGSC0003DMT400058230.v4.03 annot-version=v4.03
Sequence

ATGGATTTCAAGCTCCTCTCTTTTCTCATCTTCCACTACTTCCTAATCAATTCATCATCA
ATCTATGCATCTCTTCCATTCCCTAAACAATCTCTCCCTACCAAGTCCGGCTACCTCACC
GTCAATGACACAACCAGCTCCGCCATTTTCTACACATTCTACGAAGCTCAAAACCTCACC
ACACCTCTTTCTCAAACCCCACTTCTCATTTGGCTTCAAGGCGGACCTGGATGCTCCTCT
ATGCTCGGAAACTTCTACGAATTAGGCCCTTGGCGAGTCTCTTCTTCTCACAGGCAAAAC
GTCGAACATGTAGCGCTCAATCCTAATCCTAGATCTTGGAATCGGATTTTTGGGCTCCTT
TTCCTTGATAATCCCATTGGTGTTGGATTTAGCATTGCTGCAACACCTGAAGAAATCCCG
AGGAACCAAAAAGACGTGGCGAAGCACTTATATATCGCGATCAAAAAGTTTATCGAGCTG
AATAAATCATTCAAGGATCGGCCTATTTACATCACGGGTGAGAGTTATGCTGGCAAATAT
GTGCCAGCAATTGGATATCAAGTTTTGAAGAAAAATGTCAGGTTGCCGGTTCGTAGTAGA
GTGAATTTGGTTGGTGTTGTCATTGGCAACGGACTAACTGATCCGATTAGCCAAGTTGCT
ACTCATGCTGCAAATGCGTATTACTTTGGATTGATAAATGACAAACAAAGGGGACAACTA
GAGTTGCTTCAAGAAAAGGCGATTTCATTGGCAAAGAATGGTGATTGGAGTGAAGCAACG
AATGCTCGAAGTAAAGTCTTGAACACATTACAAAACATGACTGAAATGCCAACTTTGTAT
AACATTAGAAGGCATAAGCCATACCAAAACCATCTGGTAGCTGAGTTTTTGAACAATGTT
GAGGTGAAAAAGGCGTTGGGAGTGAATGAAACTATTGTTTTCGAGGTGTGTAGTAAGGTG
GTGAGGGAAGCATTACACGAAGATTTGATGAAGAGTGTGAAGTATATGGTGGAGTTTCTT
GTCAAGAATACTAAAGTTTTGTTGTATGAAGGTCAGTTGGATTTGAGAGTTGGCTTGGTG
TCAACCGAGGCGTGGGTGAAGAGAATGAAGTGGGAAGGAATCGACAAGTTCTTGGAAGCA
GATAGGAAAGTTTGGAGAGTTAATGGCGGGCTAGCAGGGTATGTGCAGAAATGGAGGAAC
TTAAGCCATGTTGTGGTATTGAATGCTGGACATTTGGTTCCACATGATCAACCATTGAAT
TCTCAGGCCATGATTGAAGATTGGGTACTTGAAAAGGGAGTTTTTGCTAATGATCAAATT
GAAAACTTGTCCACCAATTTGTTTGATGTACTTTAG